“Adding Consumer-Generated and Microbiome Data to the Electronic Medical Record” Using Big Data to Advance Healthcare Panel National Health Policy Conference.

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Presentation transcript:

“Adding Consumer-Generated and Microbiome Data to the Electronic Medical Record” Using Big Data to Advance Healthcare Panel National Health Policy Conference Washington, DC February 4, 2014 Dr. Larry Smarr Director, California Institute for Telecommunications and Information Technology Harry E. Gruber Professor, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD

Consumer Self Measurement is Exploding Totally Outside of the Medical Complex From the First San Francisco QS Meetup in 2008 To 116 Cities in 37 Countries in Four Years

By Measuring the State of My Body and “Tuning” It Using Nutrition and Exercise, I Became Healthier 2000 Age Age Age I Arrived in La Jolla in 2000 After 20 Years in the Midwest and Decided to Move Against the Obesity Trend I Reversed My Body’s Decline By Quantifying and Altering Nutrition and Exercise

I Used a Variety of Emerging Personal Sensors To Quantify My Body & Drive Behavioral Change Withings/iPhone- Blood Pressure Zeo-Sleep Azumio-Heart Rate MyFitnessPal- Calories Ingested FitBit - Daily Steps & Calories Burned Withings WiFi Scale - Daily Weight

From One to a Billion Data Points Defining Me: Big Data Coming to the Electronic Medical Record (EMR) Billion: My Full DNA, MRI/CT Images Million: My DNA SNPs, Zeo, FitBit Hundred: My Blood Variables One: My Weight Weight Blood Variables SNPs Microbial Genome Today’s EMR Tomorrow’s EMR

The Cost of Sequencing a Human Genome Has Fallen Over 10,000x in the Last Ten Years! This Has Enabled Sequencing of Both Human and Microbial Genomes

Healthcare Must Include a Vast Amount of Microbial Information That is Not in Today’s Medicine Inclusion of the Microbiome Will Radically Change Medicine 99% of Your DNA Genes Are in Microbe Cells Not Human Cells Your Body Has 10 Times As Many Microbe Cells As Human Cells

2012 Was the Year of Human Microbiome

Quantifying Our Human Superorganism: Distribution of Microorganism Ecology on Our Bodies Nature Reviews Microbiology v.9, p. 279 (2011)

Inflammatory Bowel Disease Has a Radically Different Gut Microbiome Ecology Than Healthy State Explosion of Proteobacteria Collapse of Bacteroidetes Expansion of Actinobacteria