Daphne Koller Bayesian Networks Semantics & Factorization Probabilistic Graphical Models Representation.

Slides:



Advertisements
Similar presentations
Local structures; Causal Independence, Context-sepcific independance COMPSCI 276 Fall 2007.
Advertisements

Bayesian Networks. Contents Semantics and factorization Reasoning Patterns Flow of Probabilistic Influence.
PGM 2003/04 Tirgul 3-4 The Bayesian Network Representation.
Probabilistic Graphical Models Tool for representing complex systems and performing sophisticated reasoning tasks Fundamental notion: Modularity Complex.
Artificial Intelligence and Lisp Lecture 7 LiU Course TDDC65 Autumn Semester, 2010
Tutorial #9 by Ma’ayan Fishelson
A Differential Approach to Inference in Bayesian Networks - Adnan Darwiche Jiangbo Dang and Yimin Huang CSCE582 Bayesian Networks and Decision Graphs.
. DAGs, I-Maps, Factorization, d-Separation, Minimal I-Maps, Bayesian Networks Slides by Nir Friedman.
1 Bayesian Networks Chapter ; 14.4 CS 63 Adapted from slides by Tim Finin and Marie desJardins. Some material borrowed from Lise Getoor.
Learning Letter Sounds Jack Hartman Shake, Rattle, and Read
Approximate Inference 2: Monte Carlo Markov Chain
V8 The Bayesian Network Representation Our goal is to represent a joint distribution P over some set of random variables X = { X 1, X 2, … X n }. Even.
Comp. Genomics Recitation 12 Bayesian networks Taken from Artificial Intelligence course, MIT, 6.034
Worksheet Part 3 Lisa: My family is big. Bart is my brother. Marge is my mother. Homer is my mother. Maggie is my sister. Abe and.
Temporal Models Template Models Representation Probabilistic Graphical
Lectures 2 – Oct 3, 2011 CSE 527 Computational Biology, Fall 2011 Instructor: Su-In Lee TA: Christopher Miles Monday & Wednesday 12:00-1:20 Johnson Hall.
V13: Causality Aims: (1) understand the causal relationships between the variables of a network (2) interpret a Bayesian network as a causal model whose.
Genetics of Blood Types. Genotypes and Phenotypes Type A, Type B, Type AB and Type O blood are phenotypes. It is not always possible to tell the genotype.
Generalizing Variable Elimination in Bayesian Networks 서울 시립대학원 전자 전기 컴퓨터 공학과 G 박민규.
Bayesian Network By Zhang Liliang. Key Point Today Intro to Bayesian Network Usage of Bayesian Network Reasoning BN: D-separation.
Marginalization & Conditioning Marginalization (summing out): for any sets of variables Y and Z: Conditioning(variant of marginalization):
1 BN Semantics 1 Graphical Models – Carlos Guestrin Carnegie Mellon University September 15 th, 2008 Readings: K&F: 3.1, 3.2, –  Carlos.
Exploiting Structure in Probability Distributions Irit Gat-Viks Based on presentation and lecture notes of Nir Friedman, Hebrew University.
Lecture 29 Conditional Independence, Bayesian networks intro Ch 6.3, 6.3.1, 6.5, 6.5.1,
Blood Types The Genetics of Blood Type.
Motivation and Overview
1 CMSC 671 Fall 2001 Class #20 – Thursday, November 8.
CS B 553: A LGORITHMS FOR O PTIMIZATION AND L EARNING Bayesian Networks.
Daphne Koller Markov Networks General Gibbs Distribution Probabilistic Graphical Models Representation.
Daphne Koller Wrapup BNs vs MNs Probabilistic Graphical Models Representation.
1 Tutorial #9 by Ma’ayan Fishelson. 2 Bucket Elimination Algorithm An algorithm for performing inference in a Bayesian network. Similar algorithms can.
CO-DOMINANT/MULTIPLE ALLELES: BLOOD TYPES
04/21/2005 CS673 1 Being Bayesian About Network Structure A Bayesian Approach to Structure Discovery in Bayesian Networks Nir Friedman and Daphne Koller.
Daphne Koller Bayesian Networks Semantics & Factorization Probabilistic Graphical Models Representation.
Daphne Koller Overview Conditional Probability Queries Probabilistic Graphical Models Inference.
Daphne Koller Template Models Plate Models Probabilistic Graphical Models Representation.
Reasoning Patterns Bayesian Networks Representation Probabilistic
Daphne Koller Introduction Motivation and Overview Probabilistic Graphical Models.
1 BN Semantics 1 Graphical Models – Carlos Guestrin Carnegie Mellon University September 15 th, 2006 Readings: K&F: 3.1, 3.2, 3.3.
Daphne Koller Sampling Methods Metropolis- Hastings Algorithm Probabilistic Graphical Models Inference.
Chapter 12. Probability Reasoning Fall 2013 Comp3710 Artificial Intelligence Computing Science Thompson Rivers University.
Daphne Koller Variable Elimination Variable Elimination Algorithm Probabilistic Graphical Models Inference.
Daphne Koller Independencies Bayesian Networks Probabilistic Graphical Models Representation.
Daphne Koller Bayesian Networks Naïve Bayes Probabilistic Graphical Models Representation.
Intelligent Systems (AI-2) Computer Science cpsc422, Lecture 33
Mon père s’appelle Homer Possessive Adjectives Mon père s’appelle Homer.
6d. Blood Typing Chapter 7.1 & 7.2.
Maximum Expected Utility
Mon père s’appelle Homer Possessive Adjectives Mon père s’appelle Homer.
Temporal Models Template Models Representation Probabilistic Graphical
Tutorial 2 Simple examples of Bayesian networks, Queries, And the stories behind them Tal Shor.
General Gibbs Distribution
Genetics Objective: To learn how to predict the probable outcome of phenotypes using punnett square.
Bayesian Networks Based on
Preliminaries: Distributions
Bayesian Networks Independencies Representation Probabilistic
Mon père s’appelle Homer Possessive Adjectives Mon père s’appelle Homer.
How are we different?.
Whose… is it? Whose …are they?
Pairwise Markov Networks
I-equivalence Bayesian Networks Representation Probabilistic Graphical
Conditional Random Fields
Probabilistic Influence & d-separation
Reasoning Patterns Bayesian Networks Representation Probabilistic
Factorization & Independence
Factorization & Independence
Probabilistic Reasoning
Flow of Probabilistic Influence
Incomplete and Codominance
3-3e. Pedigrees Chapter 7.4.
Presentation transcript:

Daphne Koller Bayesian Networks Semantics & Factorization Probabilistic Graphical Models Representation

Daphne Koller Grade Course Difficulty Student Intelligence Student SAT Reference Letter P(G,D,I,S,L)

Daphne Koller IntelligenceDifficulty Grade Letter SAT

Daphne Koller IntelligenceDifficulty Grade Letter SAT g 2 (B) i 1,d i 0,d g 1 (A)g 3 (C) 0.2i 1,d 1 0.3i 0,d 0 l1l1 l0l g1g1 0.01g3g3 0.6g2g s0s0 s1s1 0.8i1i1 0.05i0i d1d1 d0d i1i1 i0i0

Daphne Koller IntelligenceDifficulty Grade Letter SAT P(D)P(I) P(G|I,D)P(S|I) P(L|G) Chain Rule for Bayesian Networks P(D,I,G,S,L) = P(D) P(I) P(G|I,D) P(S|I) P(L|G) Distribution defined as a product of factors!

Daphne Koller IntelligenceDifficulty Grade Letter SAT g2g i 1,d i 0,d g1g1 g3g3 0.2i 1,d 1 0.3i 0,d 0 l1l1 l0l g1g1 0.01g3g3 0.6g2g s0s0 s1s1 0.8i1i1 0.05i0i d1d1 d0d i1i1 i0i0 P(d 0, i 1, g 3, s 1, l 1 ) =

Template vertLeftWhite2 Defining a joint distribution What is the joint distribution P(D,I,G,S,L)? P(D) P(I) P(G) P(S) P(L) P(D) P(I) P(G|I,D) P(S|I) P(L|G) P(D) P(I) P(G|I) P(G|D) P(S|I) P(L|G) IntelligenceDifficulty Grade Letter SAT P(D|G) P(I|D) P(S|I) P(G|L,I,D) P(L|G)

Daphne Koller Bayesian Network A Bayesian network is: – A directed acyclic graph (DAG) G whose nodes represent the random variables X 1,…,X n – For each node X i a CPD P(X i | Par G (X i )) The BN represents a joint distribution via the chain rule for Bayesian networks P(X 1,…,X n ) =  i P(X i | Par G (X i ))

Daphne Koller BN Is a Legal Distribution: P ≥ 0

Daphne Koller BN Is a Legal Distribution: ∑ P = 1 ∑ D,I,G,S,L P(D,I,G,S,L) = ∑ D,I,G,S,L P(D) P(I) P(G|I,D) P(S|I) P(L|G) = ∑ D,I,G,S P(D) P(I) P(G|I,D) P(S|I) ∑ L P(L|G) = ∑ D,I,G,S P(D) P(I) P(G|I,D) P(S|I) = ∑ D,I,G P(D) P(I) P(G|I,D) ∑ S P(S|I) = ∑ D,I P(D) P(I) ∑ G P(G|I,D)

Template vertLeft1 What is the value of 1 P(L) P(G) None of the above

Daphne Koller P Factorizes over G Let G be a graph over X 1,…,X n. P factorizes over G if P(X 1,…,X n ) =  i P(X i | Par G (X i ))

Daphne Koller Genetic Inheritance Homer Bart Marge LisaMaggie Clancy Jackie Selma Genotype Phenotype AA, AB, AO, BO, BB, OO A, B, AB, O

Daphne Koller BNs for Genetic Inheritance G Homer G Bart G Marge G Lisa G Maggie G Clancy G Jackie G Selma B Clancy B Jackie B Selma B Homer B Marge B Bart B Lisa B Maggie