Figure S1. Os11g0597700Os11g0598300Os11g0598500 Nipponbare 10 kb 60kb unit St. No.1 Pb1P5 Os11g0597400 Pb1 family genes P8P18P16P6 60kb unit.

Slides:



Advertisements
Similar presentations
CCCC 8 CCCC CCCC 8 CCCC.
Advertisements

Do Now:.  TRANSCRIPTION: process that makes an RNA copy of DNA.  RNA is single-stranded, and T is replaced by U (A-U; G-C)  RNA polymerase makes RNA,
CCCC CCCC CCCC CCCC.
NUCLEIC ACIDS {DNA;RNA} w 1. What are they? w 2. Where are they found? w 3. What are their functions? w 4. What is a nucleotide? Draw one. w (pages 219.
Macromolecules Nucleic Acids. Nucleic Acid Nucleic acids include deoxyribonucleic acid and ribonucleic acid Nucleic acids are employed in cells as both.
P247. Figure 9-1 p248 Figure 9-2 p251 p251 Figure 9-3 p253.
KEY WORDS – CELLS, DNA, INFORMATION All living things are made from Deoxyribonucleic acid is abbreviated This molecule stores that helps cells carry.
Organization of the human genome Genome structure Nuclear vs. mitochondrial genomes Gene families Transposable elements Other repeated sequences.
How does DNA work? Building the Proteins that your body needs.
R genes: Structure, recognition, signaling, & evolution – part 1 Major classes of R genes R gene structure Early signaling events R gene evolution.
Figure S1_Yao Qin et al. Figure S1 Occurrence and distribution of trihelix family in different plant species. Red branches in the cladogram indicate that.
CHAPTER 12: GENETICS.
RNA. ________ are coded DNA instructions that control the ___________ of proteins. Genetic ______________ can be decoded by copying part of the ___________.
Chapter 12 Making Proteins. Differences between RNA and DNA DNA = double strand; RNA = single strand RNA contains Ribose instead of deoxyribose. RNA uses.
Figure S1 Figure S1. Modular structure of rice proteins encompassing the SPX domain. Different colors indicate the amino acid ranges of the domains. Purple,
RNA: Structure & Function. What is RNA? RNA is a nucleic acid called Ribonucleic Acid Functions of RNA:  RNA transfers genetic information from the nucleus.
RNA Chapter Structure of RNA Ribose- the sugar molecule of every RNA nucleotide Uracil- nitrogen-containing pyrimidine base (replaces thymine) Uracil.
Non-Coding Areas & Mutations Within the human genome the majority of the DNA (~75%) is made up of sequences not involved in coding for proteins, RNA, or.
Condor: BLAST Monday, July 19 th, 3:15pm Alain Roy OSG Software Coordinator University of Wisconsin-Madison.
The SET-Domain Containing Protein and MYB-related Families: Genes AT2G05900 & AT1G17460 Kristin Gill HC70AL Spring 2008.
Do Now: On the “Modeling DNA Transcription & Translation” handout, figure out the compimentary DNA sequence AND the mRNA sequence.
RNA Structure and Function. Another Nucleic Acid?? Meet RNA  Monomer: Polymer:  What are some differences between DNA and RNA?
Nipponbare DNA Tsuyuake DNA 85H07S5 k2167k4731 k3952 k395185H07S5 k2167k4731k3951 k3952 N1N2N3N4N5N6N7N8N9N10N11N12N13N14N15N16N17N18N19 T1T2T3T4T5T6T7.
RNA  Structure Differences:  1. Instead of being double stranded, RNA is a single stranded molecule. (ss)  2. The sugar in RNA is ribose. It has one.
Supplementary Fig 1. Multiple sequence alignment of nucleotide sequences from amplified region of different Oryza sativa lines and wild species of rice.
ПЕЧЕНЬ 9. Закладка печени в период эмбрионального развития.
SC.912.L.16.3 DNA Replication. – During DNA replication, a double-stranded DNA molecule divides into two single strands. New nucleotides bond to each.
The Structure of DNA and RNA
Organization of the human genome
Supporting Figure S4 (A) (B) (C) LOC_Os03G04630 LOC_Os03G04640
A B D C E 5 kb 2 kb Copies per 1,000 GAPDH copies. UL US TRL
(3) Gene Expression Gene Expression (A) What is Gene Expression?
'. \s\s I. '.. '... · \ \ \,, I.
RNA transcription Notes
Protein Synthesis Genetics.
RNA and Protein Synthesis
Notes – Protein Synthesis: Transcription
Old News TRANSCRIPTION: process that makes an _______ ___________ of DNA. RNA is ________________, and ___ is replaced by ___ (A-U; G-C) RNA___________________.
CRISPR + CAS = Defensive or Immune System
Genome Center of Wisconsin, UW-Madison
RNA: Structure & Function
פחת ורווח הון סוגיות מיוחדות תהילה ששון עו"ד (רו"ח) ספטמבר 2015
Transcription -The main purpose of transcription is to create RNA from DNA because RNA leaves the nucleus to carry out its functions but DNA does not -A.
___ carries _____ ____________.
Protein Synthesis Miss Richardson SBI4U.
RNA.
The transcription process is similar to replication.
' '· \ ·' ,,,,
How genes on a chromosome determine what proteins to make
RNA Transcription.
12.2 DNA Replication Process of creating an identical copy of DNA is replication. 2 strands will unwind and become a template for copying. strands separate.
DNA Transcription.
B C D A H G F E.
Making Proteins Transcription Translation.
Objective: Describe the steps of Transcription
Bent out of Shape: RNA Unwinding by the DEAD-Box Helicase Vasa
Protein Synthesis.
Nucleic Acid Molecules -DNA, RNA and ATP -Structure and Functions
DNA Replication vs. Protein Synthesis
Unit 4 - The Natural Environment and Species Survival
Transcription Protein Synthesis.
RNA Transcription.
4/2 Objective: Explain the steps and key players in transcription.
Structure of the Xist gene.
Adam T. McGeoch, Stephen D. Bell  Cell 
THE GROWTH ENVIRONMENT.
Conserved motifs in the ABC
Protein Synthesis.
Volume 97, Issue 6, Pages (June 1999)
The Production of Proteins by DNA
Presentation transcript:

Figure S1. Os11g Os11g Os11g Nipponbare 10 kb 60kb unit St. No.1 Pb1P5 Os11g Pb1 family genes P8P18P16P6 60kb unit

Figure S B6LP P +RT-RT B6LP P +RT-RT B6LP P +RT-RT B6LP P +RT-RT MMMM kb Pb1 CC1CC2 RNBS-B GLPL nT Walker B MHD RNBS-D NBSLRR Coiled-coil acidic region nucleotide number

Pb1 Pit Mla10 Pib CC1CC2 RNBS-B GLPL nT P-loop Walker B MHD RNBS-D NBS domainLRR domain NBARC1ARC2 Coiled-coil domain Figure S3.

coied-coil 1 Pb11MTELASGAVSSLLVVIRNEAALLGGVRDDVQFIKEEMESMNSFLAHLAKSAPQGGEH N Mla101MDIVTGAISNLIPKLGELLTEEFKLHKGVKKNIEDLGKELDSMNAALIKIGEVPREQLDS Q RPM11MASATVDFGIGRILSVLENETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGGNGSTT T RPS51MGGCFSVSLPCDQVVSQFSQLLCVRGSYIHNLSKNLASLQKAMRMLKARQYDVIRRLET E Pib1MEATALSVGKSVLNGALGYAKSAFAEEVALQLGIQKDHTFVADELEMMRSFMME A Pita1MAPAVIASQGVIMRSLTSKLDSLLLQPPEPPPPAQPSSLRKGERKKILLLRGDL R Pi91MAETVLSMARSLVGSAISKAASAAANETSLLLGVEKDIWYIKDELKTMQAFLRA A Pikm1-TS1MEAAAMAVTAATGALAPVLVKLAALLDDGECNLLEGSRSDAEFIRSELEAVHSLLTP Pikm2-TS1MELVVGASEATMKSLLGKLGNLLAQEYALISGIRGDIQYINDELASMQAFLRDLSNV P Pi361MEFVTGAMSSLIPKLGELLKEKYNLQKNIRGKIESLSAELRRAQAVLRMVGE V Pit1MGTVLDALAWKFLEKLGQLIEDEVIMTLSVKRGIESLKKNLEFFNAVHEDAEA L coiled-coil 2 Pb181YLRKMIARHRAAVQLCQLKDRARDVGERRLRYGV Mla1083LLKKVKHKHGIAHAIKDIQEQLQKVADRRDRNKV RPM184FPRYMWARHSIAQKLGMVNVMIQSISDSMKRYYH RPS592LKLSYRYGKRVIMMLKEVESLSSQGFFDVVSEAT Pib85FPRTLLERHRVAKQMKELRNKVEDVSQRNVRYHL Pita99LRGELNRRRWIADEVTLFRARVKEAIRRHESYHL Pi995QLVKLRERHRIAIRIHNLKSRVEEVSSRNTRYNL Pikm1-TS91SNRFSDWKLPAASLPPSSVHRRAGLPPPDAGLVG Pikm2-TS87ELWTWWPRRVIASNIAQLKVRAQQIADRRSRYGV Pi3682LFKKTKHRVTIADAIQEMEKKLLEIDARHGRYPV Pit112DHMIAKRIDNINEKFEEIKMNKEMFGLERTNRQQ GLPL Pb1755SPKIFRDILEECEGHEFCMKI Mla10356FEQVSRDILKKCGGVPLAIIT RPM1362LEPIARKLVERCQGLPLAIAS RPS5337IPGLARKVARKCRGLPLALNV Pib606LVKEAKQILKKCDGLPLAIVV Pita396LTEVSHDMIKKCGGLPLAITI Pi9361MQKMVERIVNKCGRLPLAILT Pikm1-TS518LQPLAESLCLGYNHLPLYLRT Pikm2-TS414DEQVPEEIWKICGGLPLAIVS Pi36359STEACDKILKKCAGVPLAIIT Pit347FSGVGYQIVKKCDGLPLAIKV GLPL RNBS-D Pb1824YKSCLLYLAIFPKGQ Mla10428LKTCLLYLCVYPEDS RPM1431LKRCFLYCSLFPVNY RPS5408MKSCFLYCSLFPEDY Pib676LKSCFLYLSIFPEDQ Pita468LKACLLYLSIYKEDY Pi9429LKPCFLYLSIFPEDF Pikm1-TS536LRTLLLYCSAYHWSN Pikm2-TS485LKTCLLYLSIFPKGW Pi36427LKNCLLYLSMFPEDY Pit413LKQCFLWCALLPSNF ChLYxxh MHD motif Pb1890KVKSCAVHDPVHGFIT Mla10494EAYACRVHDMVLDLIC RPM1497RPKAFKMHDVIWEIAL RPS5471NKSNVKMHDVVREMAL Pib744SIDSCKVHDLMRDIAI Pita534EVLSCVVHHMVLNFIR Pi9495KIKTCRIHDIIRDITV Pikm1-TS594SYNYYEIHPVMLAFLR Pikm2-TS551KVKTFQVHDMVLEYIM Pi36495CIEGCRVHDMVLDLAR Pit477DKGESTMHDLLRSLGQ hxhHD RNBS-B Pb1705ADALIFTTENTEQ Mla10302GSRLITTTRIVSV Pi37327GSRVLVTSRRDVL Pib549TSRIIVTTRKENI Pita342CSRILITTEIEPV Pi9307GSRIVITTRNVDL Pikm1-TS405GGRIIMTTRLNSI Pikm2-TS358GGRIIVTTRFQAV Pi36310GSKILVTTRKSEV Pit297NSHILVTSRNLDV hhhhToR Figure S4.

Figure S6. Pb1 Os11g * Os11g Os11g Os11g Os05g Os06g Os06g Os11g Os11g Os11g Os11g Os11g Pi37 Pit Pib Pi9 Pita Pikm1-TS Pikm2-TS Pi36 Mla10

Pb1Os11g Os11g Os11g LP10L Os11g Os11g LP10L6LP10L6LP10L6LP10L6LP10L Transcript copies / 1  g total RNA Figure S7.

Figure S8. Pb1/P5 transcript level 5.6 (S) 2.6 (R) SS (P5) SS (P15) Panicle blast score SS (P5+P15) SS (S) 3.1 (R) repeat 1 repeat 2 P5P6P7P8P9P15P16P17P18P19 Growth stage