Proton Computed Tomography images with algebraic reconstruction M. Bruzzi 1,2, D. Bonanno 3, M. Brianzi 2, M. Carpinelli 4,9, G.A.P. Cirrone 5, C. Civinini.

Slides:



Advertisements
Similar presentations
Cirrone G. A. P. , Cuttone G. , Raffaele L. , Sabini M. G
Advertisements

An Image Filtering Technique for SPIDER Visible Tomography N. Fonnesu M. Agostini, M. Brombin, R.Pasqualotto, G.Serianni 3rd PhD Event- York- 24th-26th.
Image Reconstruction.
Giorgio Russo National Research Council, Institute of Bioimaging and Molecular Imaging (IBFM) Fondazione Istituto San Raffaele G. Giglio di Cefalù Istituto.
Development of an Active Pixel Sensor Vertex Detector H. Matis, F. Bieser, G. Rai, F. Retiere, S. Wurzel, H. Wieman, E. Yamamato, LBNL S. Kleinfelder,
Topics Covered Introduction and Background Data Flow and Problem Setup Convex Hull Calculation Hardware Acceleration of Integral Relative Electron Density.
Vertex2002 pCT: Hartmut F.-W. Sadrozinski, SCIPP Initial Studies in Proton Computed Tomography L. R. Johnson, B. Keeney, G. Ross, H. F.-W. Sadrozinski,
Reduced Dose of Proton CT Compared to X-Ray CT in Tissue-Density Variation Sensitivity T. Satogata, T. Bacarian, S. Peggs, A.G. Ruggiero, and F.A. Dilmanian.
Hartmut F.-W. Sadrozinski RESMDD06 Radiography Studies for Proton CT M. Petterson, N. Blumenkrantz, J. Feldt, J. Heimann, D. Lucia, H. F.-W. Sadrozinski,
RESMDD'02 pCT: Hartmut F.-W. Sadrozinski, SCIPP INITIAL STUDIES on PROTON COMPUTED TOMOGRAPHY USING SILICON STRIP DETECTORS L. Johnson, B. Keeney, G. Ross,
Study of the fragmentation of Carbon ions for medical applications Protons (hadrons in general) especially suitable for deep-sited tumors (brain, neck.
Proton Imaging and Fighting Cancer
Activities for Proton Computed Tomography PCT Loma Linda University Medical Center Hartmut F.-W. Sadrozinski Santa Cruz Inst. for Particle Physics SCIPP.
Vertex2002 pCT: Hartmut F.-W. Sadrozinski, SCIPP Initial Studies in Proton Computed Tomography L. R. Johnson, B. Keeney, G. Ross, H. F.-W. Sadrozinski,
Bill Atwood - July 2002 GLAS T 1 A Kalman Filter for GLAST What is a Kalman Filter and how does it work. Overview of Implementation in GLAST Validation.
tomos = slice, graphein = to write
Tissue inhomogeneities in Monte Carlo treatment planning for proton therapy L. Beaulieu 1, M. Bazalova 2,3, C. Furstoss 4, F. Verhaegen 2,5 (1) Centre.
Beam Test for Proton Computed Tomography PCT
Planar scintigraphy produces two-dimensional images of three dimensional objects. It is handicapped by the superposition of active and nonactive layers.
G EANT 4 energy loss of protons, electrons and magnetic monopole M. Vladymyrov.
The LiC Detector Toy M. Valentan, M. Regler, R. Frühwirth Austrian Academy of Sciences Institute of High Energy Physics, Vienna InputSimulation ReconstructionOutput.
Tracking at LHCb Introduction: Tracking Performance at LHCb Kalman Filter Technique Speed Optimization Status & Plans.
C OMPUTER A SSISTED M INIMAL I NVASIVE S URGERY TOWARDS G UIDED M OTOR C ONTROL By: Vinay B Gavirangaswamy.
Nuclear Instrumentation Laboratory Federal University of Rio de Janeiro -BRAZIL X-ray Fluorescence and X-ray Transmission Microtomography Imaging System.
M. Scaringella 1, M. Bruzzi 2,3, M. Bucciolini 3,4,10, M. Carpinelli 8,9, G. A. P. Cirrone 5, C. Civinini 3, G. Cuttone 5, D. Lo Presti 6,7, S. Pallotta.
May 31, th PTCOG in Catania, Italy1 Treatment Planning for Broad-Beam 3D Irradiation Heavy-Ion Radiotherapy N. Kanematsu, M. Endo, and T. Kanai,
Factors affecting CT image RAD
H8-RD22 Experiment to test Crystal Collimation for the LHC Organized by: Walter Scandale Conducted at CERN Geneva, 27 September 2006 Participants included:
Keith Evan Schubert Professor of Computer Science and Engineering California State University, San Bernardino.
Experimental part: Measurement the energy deposition profile for U ions with energies E=100 MeV/u - 1 GeV/u in iron and copper. Measurement the residual.
Evaluation of absorbed fractions for beta- gamma radionuclides in ellipsoidal volumes of soft tissue through Geant4 Ernesto Amato 1, Domenico Lizio 2 and.
Li HAN and Neal H. Clinthorne University of Michigan, Ann Arbor, MI, USA Performance comparison and system modeling of a Compton medical imaging system.
Nuclear Medicine: Tomographic Imaging – SPECT, SPECT-CT and PET-CT Katrina Cockburn Nuclear Medicine Physicist.
BES-III Workshop Oct.2001,Beijing The BESIII Luminosity Monitor High Energy Physics Group Dept. of Modern Physics,USTC P.O.Box 4 Hefei,
Part No...., Module No....Lesson No
Introduction In positron emission tomography (PET), each line of response (LOR) has a different sensitivity due to the scanner's geometry and detector.
Ultrasound Computed Tomography 何祚明 陳彥甫 2002/06/12.
Abstract Beam Test of a Large-area GEM Detector Prototype for the Upgrade of the CMS Muon Endcap System V. Bhopatkar, M. Hohlmann, M. Phipps, J. Twigger,
Pedro Arce Introducción a GEANT4 1 GAMOS tutorial RadioTherapy Exercises Pedro Arce Dubois CIEMAT
Radiation Shielding Assessment for MuCool Experimental Enclosure C. Johnstone 1), I. Rakhno 2) 1) Fermi National Accelerator Laboratory, Batavia, Illinois.
If information seems to be missing, make any reasonable assumptions. 1.A target has an areal density of 2.3 g/cm 2 and a thickness of 0.8 inch. What is.
Implementation of a New Monte Carlo Simulation Tool for the Development of a Proton Therapy Beam Line and Verification of the related Dose Distributions.
P.F.Ermolov SVD-2 status and experimental program VHMP 16 April 2005 SVD-2 status and experimental program 1.SVD history 2.SVD-2 setup 3.Experiment characteristics.
Thickness of CZT detector 110 MeV140 MeV DETECTOR A (1 mm CZT + 5 mm CZT) DETECTOR B (1 mm CZT + 10 mm CZT) DETECTOR C (1 mm CZT + 15 mm CZT) A. Generation.
Considerations on the possibility of Phase Contrast Mammography using ICS sources B. Golosio a, P. Delogu b, I. Zanette b, M. Carpinelli a, G. L. Masala.
The PRIMA Project : development of a proton Computed Tomography system Mara Bruzzi Consuntivo PRIMA+ -CSN5 2 Maggio 2013 Roma 1 M. Bruzzi 1,2*, M. Brianzi.
1 Fisica Sanitaria, Azienda Ospedaliero-Universitaria Senese, Siena, Italy 2 INFN - Florence Division, Florence, Italy 3 Physics and Astronomy Department,
The Proton Computed Tomography Apparatus developed by INFN (RDH-WP3) M. Bruzzi 1,2, D. Bonanno 3, M. Brianzi 2, M. Carpinelli 4,9, G.A.P. Cirrone 5, C.
M. Bruzzi, Sviluppo di sistemi di rivelazione a silicio per imaging con protoni e dosimetria Sviluppo di sistemi di rivelazione a silicio per imaging con.
MCS overview in radiation therapy
Development of elements of 3D planning program for radiotherapy Graphical editor options  automated enclose of contour  correction of intersections 
Algebraic reconstruction algorithms applied to proton computed tomography data M. Bruzzi 1,2, M. Brianzi 2, M. Carpinelli 3,9, G.A.P. Cirrone 4, C. Civinini.
Mitglied der Helmholtz-Gemeinschaft Hit Reconstruction for the Luminosity Monitor March 3 rd 2009 | T. Randriamalala, J. Ritman and T. Stockmanns.
Track Reconstruction in MUCH and TRD Andrey Lebedev 1,2 Gennady Ososkov 2 1 Gesellschaft für Schwerionenforschung, Darmstadt, Germany 2 Laboratory of Information.
A Low-dose, Accurate Medical Imaging Method for Proton Therapy: Proton Computed Tomography Bela Erdelyi Department of Physics, Northern Illinois University,
Beam detectors in Au+Au run and future developments - Results of Aug 2012 Au+Au test – radiation damage - scCVD diamond detector with strip metalization.
Manoj B. Jadhav Supervisor Prof. Raghava Varma I.I.T. Bombay PANDA Collaboration Meeting, PARIS – September 11, 2012.
by students Rozhkov G.V. Khalikov E.V. scientific adviser Iyudin A.F.
CT Multi-Slice CT.
IOP HEPP Conference Upgrading the CMS Tracker for SLHC Mark Pesaresi Imperial College, London.
1Physics Department, University of Florence, Italy
Huagen Xu IKP: T. Randriamalala, J. Ritman and T. Stockmanns
AQUA-ADVANCED QUALITY ASSURANCE FOR CNAO
Integration and alignment of ATLAS SCT
Development and characterization of the Detectorized Phantom for research in the field of spatial fractionated radiation therapy. D. Ramazanov, V. Pugatch,
A Brachytherapy Treatment Planning Software Based on Monte Carlo Simulations and Artificial Neural Network Algorithm Amir Moghadam.
Proton Computed Tomography system: recent results and upgrade status
TCAD Simulations of Silicon Detectors operating at High Fluences D
Results on Proton Tomography
Computed Tomography (C.T)
Presentation transcript:

proton Computed Tomography images with algebraic reconstruction M. Bruzzi 1,2, D. Bonanno 3, M. Brianzi 2, M. Carpinelli 4,9, G.A.P. Cirrone 5, C. Civinini 2, G. Cuttone 5, D. Lo Presti 3,8,G. Maccioni 4, S. Pallotta 2,7,8, N. Randazzo 3, M. Scaringella 2, F. Romano 5, V. Sipala 4,9, C. Talamonti 2,7,8, E. Vanzi 10 Prima – RDH – IRPT Collaboration 1 Physics and Astronomy Department, University of Florence, Florence, Italy 2 INFN - Florence Division, Florence, Italy 3 INFN - Catania Division, Catania, Italy 4 INFN Cagliari Division, Cagliari, Italy 5 INFN - Laboratori Nazionali del Sud, Catania, Italy 6 Physics and Astronomy Department, University of Catania, Catania, Italy 7 Department of Biomedical, Experimental and Clinical Sciences, University of Florence, Florence, Italy 8 SOD Fisica Medica, Azienda Ospedaliero-Universitaria Careggi, Firenze, Italy 9 Chemistry and Pharmacy Department, University of Sassari, Sassari, Italy 10 Fisica Sanitaria, Azienda Ospedaliero-Universitaria Senese, Siena, Italy

Introduction The proton Computed Tomography principle The PRIMA/RDH INFN proton Computed Tomography device Algebraic Reconstruction Techniques Test beam and phantom configuration Data analysis: – BI-SART reconstructed tomographies – Spatial and density resolutions starting from {0} using FBP as seed Conclusions Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 2

Proton Radiotherapy → f irst proposed by R.R. Wilson in 1946 "Radiological Use of Fast Protons", Radiology, 47: (1946) 3 Advantage : Highly conformational dose distribution i) lower dose to healthy tissues in front of it; ii) healthy tissues beyond tumor not damaged; Inaccuracies: Treatment planning presently performed by X-CT → expected errors typically of a few millimeters B. Schaffner and E. Pedroni Phys. Med. Biol. 43 (1998) 1579–1592 Direct measure of the stopping power maps Precision improvement when positioning and treatment are made in one go The proton Computed Tomography - principle pCT Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February

Tracks with multiple scattering L Measurements: entry position and angle Proton true trajectory L  straight line with confidence limits Measurements: entry and exit positions and angles L’ L’  straight line with confidence limits Measurements: entry and Exit position and angle + Most Likely Path (MLP) calculation L’’ L’’ curved trajectory with Norrower confidence limits 4 Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February

PARAMETERVALUE Proton beam kinetic energy MeV Proton beam rate 1 MHz Spatial resolution < 1 mm Electronic density resolution <1% Detector radiation hardness >1000 Gy Dose per scan < 5 cGy P1P1 P2P2 P3P3 P4P4 z x y Single particle proton tracking: silicon strip detectors → MLP Residual energy measurement: crystal calorimeter → energy loss A set of single event information can be processed by appropriate reconstruction algorithms to produce tomographic images. 5 pCT system design Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February

Most Likely Path in a pCT geometry Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 6 MLP example with 200MeV kinetic energy protons in 20cm of water: Entry: Y(0) = 0.2cm Y’(0) = -10mrad Exit: Y(20) = -0.1cm Y’(20) = +10mrad Silicon microstrip detectors: 320  m thick 200  m strip pitch MLP error envelope plus contributions from detector position measurement error (~ pitch/√12) and MCS inside the silicon sensors  The sensor thickness contribution affects only the MLP error at the edge of the phantom  ~  m 200MeV in 90MeV out Starting from D.C. Williams Phys. Med. Biol. 49 (2004) and R.W. Shulte at al. Med. Phys. 35 (11) (2008) 5 cm of air have been inserted in front and behind the 20cm H 2 O phantom

Proton Computed Tomography devices Four x-y silicon microstrip based tracking planes Proton entry and exit positions and directions Proton residual energy Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 7 Yag:Ce calorimeter p on n single sided Fz 200  m thick / 200  m pitch Phase 1 ~ 5x5cm 2 active area Phase 2 : 5x20cm 2 Results in the following refers to the small area device

Algebraic Reconstruction Techniques Iterative algorithm to reconstruct tomographic images (proton stopping power maps) from ‘projections’ (for pCT set of single proton events) Starting point (S(x,y,E) stopping power): Introducing the mass stopping power S/  : E 0 fixed energy Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 8

Algebraic Reconstruction Techniques Dividing by S/  at energy E: The left hand side doesn’t depend too much on the material composition (~2-4*10 -3 ) and could be replaced by the one measured for liquid water (NIST pstar tables - ) : Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 9

Algebraic Reconstruction Techniques Integrating along the proton path: E in is given by the accelerator, E out by the calorimeter and the ‘path’ by the tracker (Most Likely Path) Subdividing the object into a set of pixels, for the i th proton: Where w ij is the path length of proton i inside the pixel j Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 10 Wang, Med.Phys. 37(8), 2010: 4138

Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 11 Pixel 1 w ij Pixel j Pixel N Computational challenge: find the simplest (fastest) way to build the w ij matrix (could have billions of elements, most of them equal to zero) p in 200 MeV p out 90 MeV Phantom: 20 cm of water

Algebraic Reconstruction Techniques The problem is then to solve, for S j, the following set of equations: N = number of pixels; M number of protons In our case: – N = (128x128)=16384 pixels – M ~ 40(angles)*1.5x10 6 events Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 12

Algebraic Reconstruction Techniques The system could be solved using an iterative formula: Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 13 S k image vector at iteration k (stopping power) w i i th track length in each pixel (vector)  Tracker p i stopping power integral (number)  Calorimeter k relaxing factor (constant value or  0 as ~k -1 ) S 0 initial image: {0} or approx (i.e., from FBP reconstruction). ART implementations: A k = {1-event}: ART  too much ‘salt-pepper’ noise A k = {full data set}: SART (simultaneous ART)  better noise A k = {1/n of the full data set}: BI-SART (n-Block iterative SART)  good noise performance with faster convergence Gordon, R; Bender, R; Herman, GT J. Theor. Biol. (1970) 29 (3): 471–81.

Test The Svedberg Laboratory (Uppsala) Beam energy at pCT detector ~ 175 MeV Instantaneous beam intensity 10kHz protons – 40 angles (0 o -351°): 1.5*10 6 events per angle Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February14

Phantom Dimensions limited by the system field of view To have a reasonable energy measurement error the phantom material should not be tissue eqivalent:  E PMMA (5cm)~22MeV (to be compared with the calorimeter resolution at 200MeV  E calo ~4-5MeV) → Aluminium for the phantom body with Iron and Copper insert to simulate high constrast material (e.g., muscle-bone structure). Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 15 An empty hole and a uniform section added to evaluate space resolution for different constrasts and to get density r.m.s. measurements.

Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 16 Top Fe Cu Air Back Phantom design - Aluminum + Cu / Air / Fe inserts - one empty hole and a few uniform sections to evaluate space resolution for different constrast and density r.m.s. Expected Stopping Power values: Aluminium: MeV/cm (we used Anticorodal  5% discrepancy) Iron: MeV/cm Copper: MeV/cm φ=4mm φ=6mm φ=3mm φ=2mm 45mm

pCT dose evaluation CategoryRelative abundance to Cat. 3DE PhantomEvent type MeVNucl. Int. Phantom MeVNucl Int. Calorimeter 3150 MeVUseful event MeVToo much scattering MeVGeometry leakage Dose required for total tomography ( 10 6 p/cm 2 ) : ~ 2mGy

BI-SART reconstructed tomographies BI-SART algorithm - data divided into 4 blocks; No a-priori knowledge of the phantom boundary required (only an external, larger, container); proton tracks calculated using MLP formulas; GPU parallelism implemented to reduce computing time: iteration ~1’ for a 512x512 pixels image with 2x10 6 events; Relaxation parameters chosen to get best density r.m.s. resolution in approx 10 iterations. Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 18

BI-SART starting for empty picture Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 19 Iteration 11 color palette : Stopping Power (at 175 MeV) as calculated by the algorithm

Resolutions Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 20 iter. #  iter. # 11 The edge resolution has been obtained fitting the edge of the tomography with an error function and quoting the sigma The density resolution is the r.m.s. of the pixel stopping power distribution in a uniform region of the phantom BI-SART (from {0}

Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February  m at iter. # 11 The internal insert resolution has been obtained fitting the edge of the inserts with an error function and quoting sigma BI-SART (from {0} Internal Hole Resolution 45mm φ=4mm φ=2mm φ=6mm φ=3mm

FBP reconstructed tomographies The Filter Back Projection algorithm use only straigth tracks This is not true for protons because of multiple scattering Nonetheless we apply the FBP algorithm* to reconstruct a pCT image This image can be compared with BI-SART images and/or used as a starting point for the iterative algorithm Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February  m pixel size, RSP normalize to SART image FBP – hard filter *E. Vanzi et al. NIM A 730 (2013) 184–190

BI-SART starting from {0} or FBP Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 23 Starting from {0} Starting from FBP-Hard filter Much more uniform Better spatial resolution

Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 24 Starting from FBP Better spatial resolution starting from FBP- hard filter 650  m at  m at  m at  m at 50 Edge resolution BI-SART starting from {0} / FBP Starting from {0}

Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 25 More uniform when starting from {0} Density resolution BI-SART starting from {0} or FBP Starting from FBP-hard filter Starting from {0}

Conclusions A small-area proton Computed Tomography device has been tested in 175 MeV proton beam; BI-SART reconstruction algorithms implemented with GPU; Reconstructed tomographies with density and spatial resolutions fitting medical requirements (~1% ; < 1mm) ; Total time processing ~ 15’ for a 512x512 pixels image with 2x10 6 events; FBP-hard filter used as a seed improve image spatial resolution but worsen density resolution. In near future filter will be used to control the trade-off between resolution and noise. Forthcoming : Large-area pCT test beams with tissue equivalent non-homogeeneous phantoms. Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 26

FBP -filtering Mara Bruzzi Univ. Firenze - VCI Conference, Wien, February 27 n = order c = cut off frequency of the filter Decreasing order filter becomes harder. Spatial resolution improve but noise becomes more relevant. E. Vanzi et al. NIM A 730 (2013) 184–190