European Life Sciences Infrastructure for Biological Information www.elixir-europe.org ELIXIR’s needs from the EOSC Steven Newhouse, EMBL-EBI Part of the.

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Presentation transcript:

European Life Sciences Infrastructure for Biological Information ELIXIR’s needs from the EOSC Steven Newhouse, EMBL-EBI Part of the ELIXIR Compute Platform ExCo

Biological and Medical Research Infrastructures ELIXIR— European Distributed Infrastructure for life-­‐ science information BBMRI— Biobanking and BioMolecular resources Research Infrastructure EATRIS— European Infrastructure for Translational Medicine ECRIN— European Clinical Research Infrastructure Network EU-OPENSCREEN— European Infrastructure of Open Screening Platforms for Chemical Biology EMBRC— European Marine Biological Resource Centre Euro-BioImaging— European Research Infrastructure for Biological Imaging Infrafrontier— Infrastructure for mouse disease models and phenotype data Instruct— Integrated Structural Biology unlocking the Secrets of Life ISBE— Infrastructure for Systems Biology Europe MIRRI— Microbial Resource Research Infrastructure Common Issues Large diverse user data sets Analysis against reference data sets Sensitive data and restricted movement Ethical review around access International collaborations

What is ELIXIR? Sustainable European infrastructure for biological research data Facilitate research Safeguard data and build sustainable data services (~130 service providers) Deliver services through ELIXIR Nodes building on national strengths and priorities ELIXIR Hub drives coordination (17 members & 2 observers)

ELIXIR Platforms Data Standards Tools Compute Industry Training Scientific Use Cases Marine meta-genomics Integrating data for crops & plants Infrastructure for Rare diseases Framework for secure analysis of human access-controlled data Training

Expectations from EOSC Provide a vendor neutral, collaborative, secure and trusted environment for all types of life science research projects Unlock value by ensuring research data is Findable, Accessible, Interoperable and Reusable Promote reproducibility and excellence in research by ensuring long-term preservation and long-term availability of research data and tools Establish integrated services from multiple non-commercial and commercial providers that can support the needs of the ELIXIR community and that of science generally

What does EOSC need to demonstrate? Research Services Domain Services Flagship Application Users Data standards Meta-data Data set repositories Data resources Tools & Portals …. Compute & Storage Services Network Services Federated identities Persistent identifiers Research Object Mgmt Data transfer Support & Training Consultancy …. Compute & Storage Services PanCancer EuroBioImaging ELIXIR Sci Use Cases …. Public & Commercial e-Infrastructures Private Clouds Public Clouds E-Infrastructures …

European Open Science Cloud (EOSC) Services for Open Science in Europe Sustainable, Elastic, Reliable, Available, … Long-term preservation & availability of research data and tools Both for specific science domains and generally Vendor neutral, collaborative, secure and trusted environment Delivery from both the public and private sector Able to supporting all forms of research project National, international, public-private partnerships and private enterprises. Research Reproducibility (papers, software & data) Embed the research life-cycle into the infrastructure