The Healthgrids Ignacio Blanquer Universidad Politécnica de Valencia Spain EGEE Project, Medical Applications.

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Presentation transcript:

The Healthgrids Ignacio Blanquer Universidad Politécnica de Valencia Spain EGEE Project, Medical Applications

GGF – Healthgrids Workshop, 22 - September Contents Introduction and Objectives. Specific Considerations of Healthgrids. Requirements. Current Technologies. Lacks and Needs. Conclusions.

GGF – Healthgrids Workshop, 22 - September Introduction and Objectives Discuss the Main Requirements in Healthgrids and Current Technologies. Describe the Needs and Lacks of Grid Technologies in Health Applications. Discuss the Future Trends. Invite for Cooperation and Collaboration.

GGF – Healthgrids Workshop, 22 - September Terms and Concepts: eHealth eHealth Deals with Using Information and Communication Technologies to Develop an Intelligent Environment that eHealth Deals with Using Information and Communication Technologies to Develop an Intelligent Environment that Enables Ubiquitous Management of Citizens’ Health Status,Enables Ubiquitous Management of Citizens’ Health Status, Assists Health Professionals in Coping with some Major Challenges,Assists Health Professionals in Coping with some Major Challenges, or Integrates the Advances in Health Knowledge into Clinical Practice.or Integrates the Advances in Health Knowledge into Clinical Practice. Health Term is Considered in a Broad Sense. Health Term is Considered in a Broad Sense.

GGF – Healthgrids Workshop, 22 - September Terms and Concepts: Healthgrid Health Grids are Grid Services or Middleware Components that Deal with the Specific Problems that Medical Data Processing Involve. Health Grids are Grid Services or Middleware Components that Deal with the Specific Problems that Medical Data Processing Involve. Resources in Health Grids are Databases, Computing Power, Medical Expertise and Even Medical Devices. Resources in Health Grids are Databases, Computing Power, Medical Expertise and Even Medical Devices. Health Grids Aim at Assisting Epidemiology and Individualised Healthcare: Health Grids Aim at Assisting Epidemiology and Individualised Healthcare: Integrating Large Databases and Extracting Knowledge.Integrating Large Databases and Extracting Knowledge. Execute Complex Simulations on Biomedical Models.Execute Complex Simulations on Biomedical Models. Process Large Genomic Databases.Process Large Genomic Databases. Securely Exchange Medical Data and Share Applications for its Processing.Securely Exchange Medical Data and Share Applications for its Processing.

GGF – Healthgrids Workshop, 22 - September Healthgrid HealthGrids Imply New Requirements. Components Should Be Developed at Different Levels Grid Infrastructure. HealthGrid Middleware. High-level Components.

GGF – Healthgrids Workshop, 22 - September Specific Considerations of Healthgrids Security and Privacy. Access to Distributed Data. Heterogeneity of Data. Ubiquity on the Access. Computational HealthGrids.

GGF – Healthgrids Workshop, 22 - September Security and Privacy: Requirements Medical Data is Extremely Confidential. Protected by European (95/46/CE, 97/5/CE, 02/58/EC) and National Regulations (LOPD, LSSICE,…). Access Must Ensure that Identity of Patient Cannot be Guessed by Non- Authorised Users. Misuse of the Information can Lead to Economic Benefits. Privacy Leakage is Irreparable. Encryption is Required on the Access, Storage and Transmission of Medical Data. [Pseudo-] Anonymisation is Required in Data Accessible by Virtual Organisations. Access Control Rights For Critical Data Must Be Performed at File and User Levels.

GGF – Healthgrids Workshop, 22 - September Security and Privacy: Technologies Authentication and Authorisation are the Basic Pillars. Data Encryption Standard Pair of Keys Encryption (DSA, RSA, Blowfish). Data Transmission SSL-Based Protocols. Access Control Rights PKI and GSI Could be Sufficient if Data is Encrypted with User Public Keys from Grid Certificates. Although Data is Accessible, Information is not. Privacy Enhancing Technologies (CEN/TC251). WS-Privacy, WS-Policy and EPAL (Enterprise Privacy Authorisation Language). Tagged Information (HL7, DICOM,…) Could be Easily Anonymised, Plain Text of Diagnosis Could not.

GGF – Healthgrids Workshop, 22 - September Security and Privacy: Lacks and Needs Grid Infrastructure Automatic Data Storage Encryption and Decryption. Fine-Grain Access Control is Required (File-Based and User-Based Access Privileges). Auditing Mechanisms are Needed. Health-Related Layer Implementation of Privacy-Enhancing Techniques. Pseudo-anonymisation Components. Difficulty (Impossibility?) of Total Anonymisation of Many Medical Records (Medical Images, Data from very Rare Diseases). Laws Regarding the Processing of Electronic Data, Delegation of Rights and Legal Liability can be Very Restrictive.

GGF – Healthgrids Workshop, 22 - September Access to Distributed Data: Requirements Medical Data is Geographically Distributed. Many eHealth Applications will Benefit From the Coherent Access to Several Databases. Federation of Databases. Brokering Storage Resources. Compiled Access to Spread Patient Data. Management of Replicas. Metadata Cataloguing. Transparent to the User.

GGF – Healthgrids Workshop, 22 - September Access to Distributed Data: Technologies Information Technologies OGSA-DAI (Open Grid Services Architecture Data Access and Integration), WSRF or WS. Projects and Initiatives Biomedical Informatics Research Network (BIRN), Medical Data Storage and Processing on the GRID (MEDIGRID). Efforts on the Federation of Biomedical Related Databases: EntReZ, SRS. Trends in Evidenced-based Medicine are Increasing the Integration of Distributed Medical Knowledge.

GGF – Healthgrids Workshop, 22 - September Access to Distributed Data: Lacks and Needs Deployment DataGrid Infrastructure Must be Deployed Including Hospitals. Technology Trustworthy Federation of Resources. Virtualize Queries. Support of Different Database Implementations Management of Replicas do not Need Read/Write Access but Patient Records Must Be Updatable. Intelligent Storage Brokers, Making the Process of Searching more Efficient. Unlimited Access to Global Data Without Compromising Privacy.

GGF – Healthgrids Workshop, 22 - September Heterogeneity of Data: Requirements Medical Data is Multimedia and Heterogeneous. Different Storage Formats. Different Modalities and Protocols Difficult Interoperability. Standardisation is Compulsory for Global Processes and Knowledge Extraction. Biomedical Data is Also Heterogeneous Compatible Classifications and Definitions are Needed to Make Databases Interoperable.

GGF – Healthgrids Workshop, 22 - September Heterogeneity of Data: Technologies Medical Information Exchange Protocols General Patient Data: HL7, CEN ENV Vital Signs: ENV13734/5, OpenECG. Images: DICOM 3.0. Normalised Formats are being Defined (SMF,…). Ontologies Medical Ontologies (Unified Medical Language System-UMLS, from the American National Library of Medicine, SNOMED, MEDLINE Citations) do Exist in Medical Practice and Research. Genetic and Genomic Ontologies are Being Consolidated.

GGF – Healthgrids Workshop, 22 - September Heterogeneity of Data: Lacks and Needs Data Compatibility Develop Multiple Components to Homogenise Formats. Target Current Information Standards. Gateway and Format Coding/Decoding Modules Must Be Implemented on Top of Grid Storage Layers Semantic Compatibility Standard Normalised Formats are Needed. Medical Ontologies are Needed In Electronic Format. Domain-specific meta-data will Enable Interoperability (Basic for Epidemiology Studies).

GGF – Healthgrids Workshop, 22 - September Ubiquity on the Access: Requirements A User Must be Able to Access Grid Data and Services from any Computer: Not Requiring a Grid Middleware to be Installed. Preserving the Security and Personalised Access. Not Requiring Administrative Privileges Neither Complex Installation. Configuration Must be Easily Removable. Requirements on the User Side Must be As Minimum as Possible. Maximum Independence of Software and Hardware Platform. Requirements Must not Exceed Conventional Resources Available.

GGF – Healthgrids Workshop, 22 - September Ubiquity on the Access: Technologies / Lacks and Needs Technologies Standard Web-Based Transmission. Web-Browser Certificates. Proxy Repositories.  Repositories of Access Credentials (MyProxy). Portal-Based Grid Applications  Genius Portal. Lacks and Needs Improvement in the Relation of Web-Browser Certificates and Grid Certificates. Higher-level API for Portal Grid Development. More Efficient Management of Input and Output.

GGF – Healthgrids Workshop, 22 - September Computational HGrids: Requirements HPC Execution of Grand-Challenge Jobs. High-Throughput Execution. Typical Computational Requirements Resource Reservation. Load Balancing. Efficient Scheduling.

GGF – Healthgrids Workshop, 22 - September Computational HGrids : Technologies / Lacks and Needs Technologies Job-Based Grid Infrastructures. Special Needs  Efficient Parallel Jobs Execution: MPI-G.  Short Jobs Execution.  Interactive Jobs. Lacks and Needs More Efficient Resource Brokers. Shorter Grid Overhead.

GGF – Healthgrids Workshop, 22 - September Conclusions The Needs of HealthGrids are Mainly Focused on the Data Management. Needs from the Computational Point of View are Very Alike Other Disciplines. Several Components Should be Developed the Closest to the Basic Grid Middleware (Encryption, RB, SB, PET,…). Other Higher-Level Components can Constitute a Health-Grid Middleware Layer (Medical Data Format Plug-ins, Health Portals, Medical Ontologies,…).

GGF – Healthgrids Workshop, 22 - September Conclusions Upgrade Grid Infrastructures with the Requirements of Healthgrids (Specially Security and Data Storage). EGEE is Identifying Requirements and Case Studies and Feeding them into the EGEE Middleware. Deploy a Health-Grid Infrastructure. Effective Health-Grid Applications (Efficient and Oriented to a Wide Community of Users) are Needed.

GGF – Healthgrids Workshop, 22 - September Contact Ignacio Blanquer GRyCAP Universidad Politécnica de Valencia Camino de Vera s/n Valencia Tel: web: