Aquatic Plants and Algae growth in Freshwater Ponds on Staten Island, New York Tottenville High School, College of Staten Island Nada Ahmed and Salma Ahmed.

Slides:



Advertisements
Similar presentations
Diagnosis with PCR This is a preparation of DNA. We zoomed in a portion of a gene. We know that two primers, Forward and Reverse, will hybridize at specific.
Advertisements

FRESH WATER BIODIVERSITY CONSERVATION BY FARIHA MUNIR AND SHEHZADI MAHA AND GROUP.
ECOSYSTEM SNAPSHOT: FRESH WATER HABITATS. FEATURED POPULATION: AMERICAN TOAD.
Water Quality in Local Lakes and Ponds Aquatic Ecology Unit.
Water Plants By Ian Michael Pettigrew. Table of Contents Questions About Water Plants………………1 Types of Water Plants……………………….2 Providing Food and Shelter………………….3.
FRESH WATER BIODIVERSITY CONSERVATION BY FARIHA MUNIR AND SHEHZADI MAHA AND GROUP.
A Study of the Red-Bellied Turtle (Pseudemys rubriventris) Population in Lake Marburg Located in Codorus Park,Hanover (PA) INTRODUCTION A population of.
A Study of Painted Turtles (Chrysemys picta) in Lake Marburg at Codorus State Park Olivia Yaple, Department of Biology, York College Introduction Methods.
Water Quality in Local Lakes and Ponds Aquatic Ecology Unit.
Susceptibility to Ranavirus Through Frogs and Salamanders Using q-PCR For Detection and Quantification Thomas Brigman Department of Biology, York College.
Turtle Power! Karen Catron LoveJoy Elementary 1 st Grade Dr. Nicole Valenzuela Laboratory of Molecular and Evolutionary Ecology What goes on in a lab with.
Think back to ecosystems….
DNA Barcoding of Algae and Bacteria from acqutic environments Authors: Geidily Beaton 1, Kathleen Guerrero 1 Mentor: Dr. Mangala Tawde 2 Introduction Benjamin.
Honors Project May 2, 2013 By: Alyssa Rogers Mentor: Dr. Christopher Lane BROWN ALGAL DIVERSITY IN BERMUDA REVEALED USING MOLECULAR TOOLS.
Examining Lichen Biodiversity in Fire Island through DNA Barcoding Authors: Urooba Abid, Samuel Croes, Danielle Hofmann, and Hamza Malick Mentor: Lorie.
Shinnecock Bay Crabs and Biodiversity Abstract: The birth of this project of an exploration in biodiversity began on an excursion to the Shinnecock Bay.
Introduction Biodiversity, in the simplest terms, means variation in living systems and that is extremely important to any habitat that wants to continue.
Using DNA Barcoding to Identify Freshwater Algae in Two Bodies of Water Lauren Cottral, Shweta Karmakar, Janalyce Torres Islip High School Results We were.
Something to Smile About: DNA Barcoding of St. John’s Wort Herbal Supplements Authors: Justin Rubino, Gus Moody Mentor: Vanaja Zacharopoulos, PhD Friends.
Fishy Labels Ethical Culture Fieldston School Zoe Antell, Eliza Epstein and Sarah Rockhill: Howard Waldman Abstract Lately there have been many rumors.
Unidentified Flora of the Upper Peconic River Authors: Angela Blangiforti, Theresa Blangiforti Sabrina Sauerwald, Edward Spagnuolo Teachers: Robert Bolen,
Plant Biodiversity in the Peconic River Methods ●First, 20 leaf samples from the Peconic River Otis Pike Preserve were collected. All the samples are from.
Genetic Diversity Of Freshwater Snails in The Peconic River Using the DNA Barcoding Method ●Biodiversity refers to the amount of genetic diversity in ecosystems.
Saltwater Algae vs Freshwater Algae
Soil organisms in a grass area affected by saltwater
What is the Makeup of the Community of Organisms Living on Rock Substrate Near the Post in the Long Beach High School Pond? Matthew Amato, Joseph Carrasco,
Biodiversity of Seaweed on Long Island
Evidence of Two Invasive Aquatic Species in Lake Ronkonkoma
Funded by the Thompson Family Foundation
Biodiversity of Macroinvertebrates at Argyle Lake
Identifying Species In The Peconic River Using DNA Barcoding Method
Species Biodiversity in the Peconic River
Damselfly Biodiversity in the Peconic River
Comparison of Plant Species in Big Egg Marsh in Jamaica Bay, NY
Coding the Surface: Examining the Composition of a Recurring Unknown Culture of Organisms in Van Cortlandt Lake Ryan Conard,1 David Goldberg,1 Zander Harpel,1.
Biodiversity in Oyster Reefs: A DNA Barcoding Approach
Diversity of Damselflies: The Damselflies of Van Cortlandt Park
The extraction of microorganisms in the Great South Bay
FIGURE 2: SAMPLES COLLECTED FIGURE 1: STEPS OF DNA BARCODING
The bacterial ecology of the sheep mammary gland
The Biodiversity of Snails in Van Cortlandt Park
DNA Barcoding of Damselfly Nymphs
Biodiversity of Ants: DNA Barcode of Formicidae Collected in Two Different Locations Relative to Pollution Funded by the Thompson Family Foundation Authors:
Rachel Bautzmann, Mentor: Dr
Qualitative and quantitative assessment of DNA extracted
Identifying a Novel Species Through DNA Barcoding
Terrestrial Species of the Peconic River
Effects of Pollution on Biodiversity of Algae in Bodies
Ants Effect on Soil Composition
Authors: Danish Farooq, Gregory Kowalczyk, Michael Steffanetta
Results Abstract Introduction Discussion Materials & Methods
Funded by the Thompson Family Foundation
Tables & Figures Abstract Introduction Discussion Materials & Methods
Authors: Lauren Aslami3 and Sabrina Li3
The Various Effects of Playground Substrates on Invertebrates
The Biodiversity of Algae on Long Island Methods and Materials:
Jenna Marcotte1, Emily Picchiello1, John Halloran1
Alexi Flores, Olivia Reid, Ethan Young, Adriana Zarcone
Biodiversity in the Forge River
Testing Marine Copepod Diversity Throughout the Connetquot River
Biodiversity in the Peconic and Forge River
The Biodiversity of Aquatic Invertebrates in
The Effect of Humans in The Environment
Biodiversity of Long Island Macroinvertebrate In the Connetquot River
Abstract Materials & Methods Results Acknowledgements References
Identification of Aquatic Macroinvertebrates in a Pond on Long Island
. . Using DNA Barcoding To Measure The Biodiversity in Ants in Residential Areas And Park Areas Authors: Emily Augulis1, Paige Dreher1, Sarah Hussain1.
DNA Barcoding of Ground Plants in Prospect Park
Figure 5: Sequence Results Table 1: Water Quality Tests
Authors: Heather Abbene and Stephanie Ross Mentor: Frederick Feraco 1
Presentation transcript:

Aquatic Plants and Algae growth in Freshwater Ponds on Staten Island, New York Tottenville High School, College of Staten Island Nada Ahmed and Salma Ahmed Co-Mentors: Eugenia Naro-Maciel, Seth Wollney Abstract Our main objective was to explore aquatic plants and algae on Staten Island in two approaches, the first of which is that we barcode the samples and then compare them with current literature. Aquatic plants and turtle shell algae were collected in the summer of 2015 on varying areas on Staten Island. C. picta and C. serpentina, also known as the painted turtle and the snapping turtle, respectively, are two known species that carry epizoic algae that we investigated. The materials needed are the Rbcl primer and the GE beads to aid in the DNA extraction process. Twelve out of thirteen results were successfully barcoded and the samples included six genera of aquatic plants. Even though our successful sequences did not include algae, it gave us much more information on the topic as a whole. With these results it was interesting to find invasive aquatic plants within Long Pond, which is considered one of the most natural places on Staten Island. Introduction C. picta and the C. serpentina, also known as the painted turtle and the snapping turtle, respectively, are two known species that carry epizoic algae. The green algae Basicladia chelonum is mostly epizoic in fresh water turtles, and was commonly found on the shells, as well as the heads and tails of these species of turtle. To this day, only one species of Basicladia chelonum has been found occurring regularly on fresh water turtles. In some cases the turtle is merely seen as a substrate, where it only provides an area for the algae to grow and disperse. Algae can also benefit the turtle by serving as a supplemental food source, though this is likely not the case with Basicladia chelonum. Other studies have shown that algal association with fresh water turtles may in fact provide insight into some history of these communities. Past studies have barcoded and identified the certain types of algae that grow on snapping and painted turtles. Our main objective comes in two parts: the first is to barcode and sequence the algae we collected and compare them with the current literature. The second main objective was to explore aquatic plants on Staten Island ponds using DNA barcoding. Materials & Methods The aquatic plants and turtle shell algae were collected in the summer of 2015 on varying areas on Staten Island. Turtle shell algae was collected from Sharrott’s Pond and Walker Pond, while the pond algae and aquatic plants were collected in Long Pond and Fresh Kills C2 Rain Water Basin. Figure 1 shows a map of Staten Island and depicts all the different lakes and ponds where the samples were collected. The samples that were collected were: algae from the backs of turtle shells, pond algae, and aquatic plants. The pond algae and aquatic plants were collected with dip nets and the turtle shell algae was scraped from the backs of turtles. In total there was twelve samples collected. The twelve samples of algae and aquatic plants were subjected to PCR using GE beads and a primer. After the samples went through the PCR process they were run through gel electrophoresis then sequenced at Genewiz. The results were then edited and BLASTed using DNA Subway. Figure 1: This image depicts Staten Island and the various ponds and parks in which the samples were from. Credit to "Anthony Cak - ASRC, CUNY". Results Out of thirteen samples twelve were successfully sequenced using an rbcl primer (Table 1). Four were identified as being from the genus Myriophyllum. Three of the four were of the same species, M. heterophyllum, and one of them differed and was part of the M. simulans species. Five samples were from the genus Ludwigia, four were from the species L. adscendens, and one was from the species L. peploides. We also had an Abies firma, Nuphar advena, Potamogeton alpinus, and Lemna japonica, which were all one of a kind finds. Tables & Figures Table 1:This table is a representation of all the samples collected, the identified genus and species with common name, and the number of mismatches found from DNA Subway. Discussion Our two main objectives was to barcode algae from turtle shells and to explore aquatic plants on Staten Island through the use of DNA barcoding. Based on the results from DNA subway we were surprised to find out that out of the twelve samples barcoded none of the samples were algae. Instead all the samples were varying aquatic plants and one sample was a fir plant. One reason we might not have gotten algae is the primer we used. Rbcl is less reactive to algae than to aquatic plants, and one hypothesis is that Rbcl is more susceptible to plant material rather than algae. So instead of the algae sample was amplified the aquatic plant was. This shows that in future studies with algae Rbcl is not a good primer to work with. References Garbary DJ, Bourque G, Herman TB, Mcneil JA. Epizoic Algae from Freshwater Turtles in Nova Scotia. Journal of Freshwater Ecology. 2007; 22(4):677–685. Neil WT, Allen ER. Algae on Turtles: Some Additional Considerations. Ecology. 1954; 35(4):581–584. Acknowledgements We would like to thank both our mentors Eugenia Naro-Maciel and Seth Wollney who were always there to help us throughout our DNA extraction. In addition, we would like to thank the College of Staten Island for providing a space for us to work in ever week. Finally we would like to thank the Urban Barcoding Research Program for giving us this opportunity to do this research. Without this program none of this research would have been possible. ID NumberSpecies Common name Blast Results Number of Mismatc hes CPPT- L12L10R 12 Myriophyllum simulansWatermilfoil FK023-CAbies firmaFir FKC-P1 Ludwigia adscendens Water primrose FKC-P2 Ludwigia adscendens Water primrose FKC-P3Nuphar advenaPond lily FKC-P4 Myriophyllum heterophyllumWatermilfoil LP Myriophyllum heterophyllum Watermilfoil LP Ludwigia adscendens Water primrose LP Potamogeton alpinusPondweed AB LP15-142Lemna japonicaDuckweed AY WP Ludwigia adscendens Water primrose WP Ludwigia peploides Water primrose HRST- L1R8 Myriophyllum heterophyllumWatermilfoil