Analysis of Hydrogen Bonding in the OH Stretch Region of Protonated Water Clusters Laura C. Dzugan and Anne B. McCoy June 26, 2015.

Slides:



Advertisements
Similar presentations
Infrared spectroscopy of metal ion-water complexes
Advertisements

Understanding Complex Spectral Signatures of Embedded Excess Protons in Molecular Scaffolds Andrew F. DeBlase Advisor: Mark A. Johnson 68 th Internatinal.
Molecular Modeling: Molecular Vibrations C372 Introduction to Cheminformatics II Kelsey Forsythe.
Photoelectron Spectroscopy Lecture 3: vibrational/rotational structure –Vibrational selection rules –Franck-Condon Effect –Information on bonding –Ionization.
Ryunosuke Shishido, Asuka Fujii Department of Chemistry, Graduate School of Science, Tohoku University, Japan Jer-Lai Kuo Institute of Atomic and Molecular.
19_01fig_PChem.jpg Spectroscopy. 18_12afig_PChem.jpg Rotational Motion Center of Mass Translational Motion r1r1 r2r2 Motion of Two Bodies Each type of.
Chemistry 6440 / 7440 Vibrational Frequency Calculations.
Vibrations of polyatomic molecules
Simulating the spectrum of the water dimer in the far infrared and visible Ross E. A. Kelly, Matt J. Barber, Jonathan Tennyson Department of Physics and.
Vibrational Spectroscopy HH O Bend. Diatomic Molecules So far we have studied vibrational spectroscopy in the form of harmonic and anharmonic oscillators.
VIBRATIONAL OVERTONE SPECTRA OF C 2 H 6 AND C 2 H 4 IN CRYOGENIC LIQUIDS Helena Diez-y-Riega and Carlos Manzanares Baylor University 2009.
Lecture 3 INFRARED SPECTROMETRY
Spectral Regions and Transitions
Infrared Spectroscopy of Doubly-Charged Metal-Water Complexes
INFRARED SPECTROSCOPIC STUDY ON FERMI RESONANCE OF THE EXCESS PROTON VIBRATION IN BINARY CLUSTERS Ryunosuke SHISHIDO, Asuka FUJII Department of Chemistry,
Vibrational Spectroscopy
A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.
Gang Ma, Xiangke Chen and Heather Allen The Ohio State University June 21 st 2007 Interfacial water structure of phospholipid Langmuir monolayers investigated.
Progress Towards the Accurate Calculation of Anharmonic Vibrational States of Fluxional Molecules and Clusters Without a Potential Energy Surface Andrew.
Free O  H Anharmonic Stretching Motions in H  (CH 3 OH) 1  3 with or without Attached Argon 2014/06/19, 10:56-11:11 AM Hsiao-Han Chuang 1 Jer-Lai Kuo.
Meng Huang and Anne B. McCoy Department of Chemistry and Biochemistry The Ohio State Univerisity.
States and transitions
DECODING THE EFFECTS OF LARGE AMPLITUDE VIBRATIONAL MOTIONS IN SPECTRA
Infrared spectroscopy of the hydrated sulfate dianion Columbus2006.
Christopher Leavitt Yale University Vibrational spectra of cryogenic peptide ions using H 2 predissociation spectroscopy.
Department of Chemistry, University of Georgia, Athens, GA National Science Foundation Infrared.
Spectroscopic signatures of bond- breaking internal rotation in HCP. Mark S Child and Matt P Jacobson Oxford University UK UK EPSRC.
Multiple Photon Absorption in Hydrated Cesium Ion Clusters Jordan Beck, Jim Lisy June 17,2008 OSU International Symposium on Molecular Spectroscopy.
Adrian M. Gardner, Alistair M. Green, Victor M. Tamé-Reyes, Victoria H. K Wilton and Timothy G. Wright Electronic and Photoelectron Spectroscopy of Toluene.
C-H Stretch 2962 and 2872 cm -1 C-H in CH 3 strong 2926 and 2853 cm -1 C-H in CH 2 strong 2890 cm -1 tertiary C-H weak All ± 10 cm cm -1 C-H stretch.
Infrared Photodissociation Spectroscopy of TM + (N 2 ) n (TM=V,Nb) Clusters E. D. Pillai, T. D. Jaeger, M. A. Duncan Department of Chemistry, University.
P. D. CARNEGIE, B. BANDYOPADHYAY AND M. A. DUNCAN
Ohio State (Current and recent): Laura Dzugan Jason FordSamantha Horvath Meng Huang Zhou LinMelanie Marlett Bernice Opoku-AgyemanAndrew PetitBethany Wellen.
Proton Sponges: A Rigid Organic Scaffold to Reveal the Quantum Structure of the Intramolecular Proton Bond Andrew F. DeBlase, Michael T. Scerba, Thomas.
Meng Huang, Anne B. McCoy and Terry A. Miller Department of Chemistry and Biochemistry The Ohio State University CH 2 XOO Systems (X = Cl, Br, I) FD05/06.
Metal Hydroxide Ion Pairs: Solvation Trends, Charge Transfer, and Vibrational Stark Shift Modulation. Jonathan M. Voss, Brett M. Marsh, Jia Zhou, Etienne.
H 2 Predissociation Spectroscopy: Arron Wolk Yale University Infrared Predissociation Spectroscopy of H 2 -tagged Dicarboxylic Acid Anions.
California State University, Monterey Bay CHEM312
Ohio State (Current): Charlotte E. HinkleSamantha Horvath Annie LesiakAndrew Petit Sara E. Ray Former group members who were involved in DMC development.
Vibrational Spectroscopy of Benzene-(Water) n with n=6,7 Daniel Tabor 1, Ryoji Kusaka 2, Patrick Walsh 2, Edwin Sibert 1, Timothy Zwier 2 1 University.
Proton Stretch in H 4 O 2 + : Effect of Ar Jheng-Wei Li, Ying-Cheng Li, Kaito Takahashi and Jer-Lai Kuo Institute of Atomic and Molecular Sciences, Academia.
Protonated Water Clusters Revisited: Investigating the Elusive Excess Proton Vibrational Signature using Cryogenic Ion Spectroscopy Joseph Fournier, Christopher.
Decoding Dynamical Information from Vibrational Spectra.
Magic Numbers in Large Hydrated Alkali Metal Clusters: K + and Cs + Matthew L. Ackerman, Jason D. Rodriguez, Dorothy J. Miller, and James M. Lisy University.
Pujarini Banerjee & Tapas Chakraborty Indian Association for the Cultivation of Science Kolkata, India International Symposium on Molecular Spectroscopy,
From the Bottom Up: Hydrogen Bonding in Ionic Liquids 6/19/2014 Olga Gorlova, Conrad Wolke, Joseph Fournier, Christopher Johnson and Mark Johnson.
Heavy Atom Vibrational Modes and Low-Energy Vibrational Autodetachment in Nitromethane Anions Michael C. Thompson, Joshua H. Baraban, Devin A. Matthews,
Evidence for Perturbations in Acetylene S 1 Levels from Stimulated Emission Pumping (SEP) Spectra A Coy Wink from the cis-Well? Barratt Park, Joshua H.
Jheng-Wei Li, Kaito Takahashi and Jer-Lai Kuo Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, Taiwan Vibrational Coupling in Solvated.
Infrared (IR) Spectroscopy for Structural Analysis Ridwan Islam.
Erin M. Duffy, Brett M. Marsh, Jonathan M. Voss, Etienne Garand University of Wisconsin, Madison International Symposium on Molecular Spectroscopy June.
Infrared Spectroscopy of Protonated Acetylacetone and Mixed Acetylacetone/Water Clusters Daniel T. Mauney, David C. McDonald II, Jonathon A. Maner and.
Lineshape analysis of CH3F-(ortho-H2)n absorption spectra in 3000 cm-1 region in solid para-H2 Yuki Miyamoto Graduate School of Natural Science and Technology,
Electronic Spectra of Coordination Compounds
Bryan Changala JILA & Dept. of Physics, Univ. of Colorado Boulder
Charge Oscillation in C-O Stretching Vibrations: A Comparison of CO2 Anion and Carboxylate Functional Groups Michael C. Thompson, J. Mathias Weber 72nd.
Near-Infrared Spectroscopy of Small Protonated Water Clusters
Daniel Tabor1, Patrick Walsh2, Timothy Zwier2, Edwin Sibert1
International Symposium on Molecular Spectroscopy
Lan Cheng Department of Chemistry The Johns Hopkins University
Britta A. Johnson and Edwin L. Sibert III
International Symposium on Molecular Spectroscopy
Vibrational Signatures of Solvent-Mediated Core Ion Deformation in Size-Selected [MgSO4Mg(H2O)n=4-11]2+ Clusters Patrick Kelleher, Joseph DePalma, Christopher.
Diatomic molecules
Funded by NSF (ES) and DOE (TZ)
PROBING THE MOLECULAR DYNAMICS OF A Cu(CD3OD) CLUSTER WITH
Vibrational Predissociation of the Methanol Dimer
F H F O Semiexperimental structure of the non rigid BF2OH molecule (difluoroboric acid) by combining high resolution infrared spectroscopy and ab initio.
Harmonic Oscillator.
IR-Spectroscopy Introduction Theory Instrumentation Sample preparation
Presentation transcript:

Analysis of Hydrogen Bonding in the OH Stretch Region of Protonated Water Clusters Laura C. Dzugan and Anne B. McCoy June 26, 2015

Chemical and biological systems Scientists would like to understand the dynamics of this highly mobile proton Zundel and Eigen Numerous theoretical and experimental studies M.A. Duncan, M.A. Johnson, K. Asmis, M. Okumura, K.D. Jordan, N. Agmon, G.A. Voth, etc. Protonated Water Clusters 1000 cm – cm –1

Experimental Spectra of H + (H 2 O) 3 and H + (H 2 O) 4 Johnson, M.A., Wolke, C.T., Fournier, J.A. Narrow peaks due to free OH stretches Broad, red-shifted peaks due to OH stretches involved in strong H- bonding This broad region is seen in other strongly H-bonded systems, such as CaOH + (H 2 O) 4 Intensity Photon Energy, cm –1

Harmonic – black Experiment – red Previous Study of CaOH + (H 2 O) 4 Johnson, C. J.; Dzugan, L. C.;…; McCoy, A. B.; Johnson, M. A. J. Phys. Chem. A 2014, 118, 7590.

Harmonic – black Experiment – red Calculations on CaOH + (H 2 O) 4 Similar geometries and energies Peaks are similar in the 3600 cm –1 to 3800 cm –1 region Other peaks are different by hundreds of cm –1 65 cm -1 0 cm cm cm -1 Johnson, C. J.; Dzugan, L. C.;…; McCoy, A. B.; Johnson, M. A. J. Phys. Chem. A 2014, 118, 7590.

Broadening was thought to be caused by coupling between the low frequency modes to the OH vibrational modes Developed a theoretical method to model this coupling by only focusing on the optimization of the high frequency modes Defined normal modes in internal coordinates because we do a partial optimization in internal coordinates Previous Study of CaOH + (H 2 O) 4 Johnson, C. J.; Dzugan, L. C.;…; McCoy, A. B.; Johnson, M. A. J. Phys. Chem. A 2014, 118, Experiment Scaled Harmonic Can we use the same method to model the broadening observed in H + (H 2 O) 3 and H + (H 2 O) 4 ? Can we determine the physics behind the broadening?

O-O-O angle |X(R)| 2 Procedure 1.Calculate the harmonic oscillator probability amplitude 2.Model low frequency modes Ψ(q w,R) = Φ(q w ;R)Χ(R), where q w are the OH stretch modes and the intramolecular HOH bends Randomly sample geometries from |X(R)| 2 using Monte Carlo sampling 3.Optimize geometries in OH stretch modes and the intramolecular HOH bends 4.Calculate the harmonic frequencies and intensities 5.Construct spectrum as sum of spectra for sampled geometries

Harmonic Spectra for H + (H 2 O) 3 & H + (H 2 O) 4 Method works for protonated water clusters, but could use modification Compare to electronic structure theory calculations done in normal modes based on Cartesian coordinates Can we extend our method through 2 nd order perturbation theory in internal coordinates? Intensity Photon Energy (cm –1 ) Experiment Scaled Harmonic VPT2 Calculation Level of theory/basis: MP2/aug-cc-pVDZ Intensity Photon Energy (cm –1 )

2 nd Order Perturbation Theory Harmonic approximation: Real molecules are not harmonic 2 nd order perturbation theory for internal coordinates rere r V(r) rere r rere Zero-order energy: 1 st order correction to the energy: 2 nd order correction to the energy : Can calculate transition energy for a vibration: E 1 – E 0 n=0 n=1 n=2

Determination of Hamiltonian Hamiltonian in internal coordinates: Need H 0, H 1, and H 2 for 2 nd order perturbation theory Taylor series expansion on H H1H1 H2H2 H1H1 H2H2 0 equil. H0H0 H0H0

Intensity Calculations With the 2 nd order frequencies and intensities determined, the anharmonic spectra for the protonated water clusters can be determined Expand the dipole in a Taylor series McCoy, A.B.; Sibert, E.L. J. Chem. Phys. 1991, 95, µ1µ1 µ2µ2 µ0µ0

2 nd Order Perturbation Theory Results More red-shifted than harmonic Shape is similar to harmonic Not noticeably “better” than harmonic Experiment Scaled Harmonic Anharmonic Intensity Photon Energy (cm –1 ) Intensity Photon Energy (cm –1 )

Anharmonicities Experiment VPT2 calculation Anharmonic calculation of all modes Anharmonic calculation of only HOH bends/OH stretches Fermi resonance causes shift from VPT2 calculation compared to anharmonic calculations Decoupling of the low frequency modes from the high frequency modes causes shift between our two anharmonic calculations There is coupling between the lower frequency and high frequency modes our model does not take into account - yet 1 1 Intensity Photon Energy (cm –1 )

Anharmonicities Experiment VPT2 calculation Anharmonic calculation of all modes Anharmonic calculation of only HOH bends/OH stretches Resonances causes slight shift from VPT2 calculation compared to anharmonic calculations Decoupling of the low frequency modes from the high frequency modes causes shift and split between our two anharmonic calculations There is coupling between the lower frequency and high frequency modes our model does not take into account – yet Can still investigate the cause of the broadening Intensity Photon Energy (cm –1 )

Correlations Can see correlations with H-bonded OH stretches w1 OH w2 OH Frequency (cm –1 ) r (Å) Lowest OH stretch frequency w1 w Frequency (cm –1 ) r (Å) 2nd lowest OH stretch frequency w1 OH w2 OH

Correlations w1 OH w2 OH w3 OH Frequency (cm –1 ) r (Å) Low OH stretch frequency w1 OH w2 OH w3 OH Frequency (cm –1 ) r (Å) Middle OH stretch frequency w1 OH w2 OH w3 OH Frequency (cm –1 ) r (Å) High OH stretch frequency w2 w1 w3

Conclusions Method works well in modeling the coupling between the low frequency modes and high frequency modes Harmonic is not accurate enough for protonated water clusters Extend through 2 nd order perturbation theory 2 nd order perturbation theory is more red-shifted, but shape of curve is the same Strongest correlation for the cause of the broadening is seen in the OH bond distances Future Work Higher order terms in the intensities Determine which other modes should be included in the reduced dimensional Hamiltonian

Acknowledgements Johnson Lab: Mark A. Johnson Joseph A. Fournier Conrad T. Wolke Back row: Bernice Opoku-Agyeman, Melanie Marlett, Zhou Lin, Laura Dzugan Front row: Jason Ford, Scott Garner, Anne B. McCoy, Meng Huang