DICOM Korea Workshop 2015 Yonsei University, Gangwon, Korea August 27, 2015 Analytic Workflow: From Images to Reports Kevin O’Donnell Toshiba Medical Research.

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Presentation transcript:

DICOM Korea Workshop 2015 Yonsei University, Gangwon, Korea August 27, 2015 Analytic Workflow: From Images to Reports Kevin O’Donnell Toshiba Medical Research Institute - USA, Inc. Sr. R&D Manager Chair, DICOM WG10 Past Chair, DICOM Standards Cmte

Dataflow & Workflow 2 Reporting Workstation PACS Processing Workstation Acquisition Modality RIS Reporting Worklist Modality Worklist Modality Performed Procedure Step (MPPS) Processing Worklist UPS Worklist UPS Events (Subscription) Instance Avail. Notif. Images

“Post-Acquisition” Workflow Example “Workitem” Tasks: 3D View Generation Computer Aided Detection Clinical Applications Pre-fetching Image Routing CD Burning Image Importing … 3

Unified Procedure Step (UPS) Add “Create Workitem” & “Push Workflow” Request another system to add item to worklist Replacement for implicit workflow (“push to a box and hope for the best”) Simplify Implementation GPWL had N:M relation of SPS:PPS State diagram was very complex Improve Status/Result Monitoring Getting PPS feed was awkward; required configuration and forwarding Both RESTful (UPS-RS) and DIMSE APIs

UPS Object Sched. Task Details Progress Performed Task Details Relationship A Workitem has its attributes grouped into 4 Modules: (this does not affect processing; just for logical organization) UPS Workitem Structure

UPS Object Sched. Task Details Progress Performed Task Details Relationship Relationship Module - Patient demographics - Admission details - Order details - Requested Procedure - Accession # - Reason for Requested Procedure - Requesting physician/department - etc… UPS Workitem Structure

UPS Object Sched. Task Details Progress Performed Task Details Relationship Scheduled Proc. Info. Module - Priority - Requested perform/completion time - Requested resources/location - Requested Procedure descrip./codes - Requested Processing parameters - List of Input data IDs & Location - Input Data Availability Flag - Requested Output Location - etc… UPS Workitem Structure

UPS Object Sched. Task Details Progress Performed Task Details Relationship Progress Module - UPS State (Scheduled, In-Progress, Completed, Canceled) - Progress Status – Numerical (e.g. % complete) - Progress Status – Description (e.g. Annealing phase complete) - Contact information for performer (e.g. phone #) - etc… UPS Workitem Structure

UPS Object Sched. Task Details Progress Performed Task Details Relationship Performed Proc. Info. Module - Time Performed/completed - Performing resources/location - Performed Procedure descrip./codes - Performed Processing parameters - List of Output data IDs & Location - etc… UPS Workitem Structure

UPS Object Sched. Task Details Progress Perf. Task Details Relationship A UPS Object is managed by one SCP. (It doesn’t move) 4 SOP Classes can be used to operate on a UPS object. Each SOP Class supports a few related operations. SCU/SCP not required to implement all the SOP Classes. Can implement SOP Classes based on the operations it needs. UPS SOP Classes

UPS Object Sched. Task Details Progress Perf. Task Details Relationship UPS Push SOP Class allows SCU systems to: * create (push) a new worklist item (i.e. instance) on a worklist * request cancellation of a worklist item UPS SOP Classes

UPS Object Sched. Task Details Progress Perf. Task Details Relationship UPS Pull SOP Class allows SCU systems to: * query a worklist for matching items * get details for a worklist item * take ownership/control (pull) of a worklist item * modify progress/status/result details for the worklist item * finalize a controlled worklist item as Completed or Canceled. UPS SOP Classes

UPS Object Sched. Task Details Progress Perf. Task Details Relationship UPS Watch SOP Class allows SCU systems to: * query a worklist for items of interest * subscribe/unsubscribe for change events for one worklist item * subscribe/unsubscribe for change events for all worklist items * get details for a worklist item * request cancellation of a worklist item UPS SOP Classes

UPS Object Sched. Task Details Progress Perf. Task Details Relationship UPS Event SOP Class allows SCU systems to: * receive change events for worklist items UPS SOP Classes

UPS Interfaces: DIMSE and RESTful DIMSE (Traditional DICOM Protocol) Push/Pull/Watch/Event SOP Classes RESTful (New Web Protocol) UPS-RS Supplement 171 (Final Text) HTTP Interface to UPS Service Mostly Request/Response for each DIMSE message Uses WebSockets for Events SCP can serve DIMSE clients & RESTful clients interacting with the same UPS workitems. 15

UPS-RS Summary Action TypeSectionMethod & Resource CreateUPS6.9.1POST {+SERVICE}/workitems{?AffectedSOPInstanceUID} UpdateUPS6.9.2POST {+SERVICE}/workitems/{UPSInstanceUID}{?transaction} SearchForUPS6.9.3GET {+SERVICE}/workitems{?query*} RetrieveUPS6.9.4GET {+SERVICE}/workitems/{UPSInstanceUID} ChangeUPSState6.9.5PUT {+SERVICE}/workitems/{UPSInstanceUID}/state RequestUPSCancellation6.9.6POST {+SERVICE}/workitems/{UPSInstanceUID}/cancelrequest CreateSubscription6.9.7 POST {+SERVICE}/workitems/{UPSInstanceUID}/subscribers/{AETitle}{?deleti onlock} {additional methods omitted for brevity} SuspendGlobalSubscription6.9.8 POST {+SERVICE}/workitems/ / {additional methods omitted for brevity} DeleteSubscription6.9.9 DELETE {+SERVICE}/workitems/{UPSInstanceUID}/ subscribers/{AETitle} OpenEventChannel6.9.10GET {+WSSERVICE}/subscribers/{AETitle} SendEventReport6.9.11N/A 16 See DICOM PS3.18 for details

UPS UPS Pull Workflow Example 3D Workstation Create UPS Worklist Manager (SCP) Performer (SCU) Watcher (SCU) Requester (SCU) Subscribe UPS Subscribe Global Query Get UPS Contents UPS State “In-Progress” UPS State “Complete” Set UPS Contents UPS State Event Get UPS Contents Dashboard System

Pull Workflow R I S 3D Workstation Give me a list of tasks that need to be done (C-FIND) UPS SCPSCU I will do that one (N-ACTION Set to IN-PROGRESS) I am finished (N-ACTION Set to COMPLETE) Record these details in the UPS (N-SET attribute values)

Push Workflow R I S 3D Workstation Please perform this task (N-CREATE with these attribute values) UPS SCUSCP I have started to do that task (N-EVENT it is IN-PROGRESS) I am finished (N-EVENT it is COMPLETE) I have updated details in the UPS (N-EVENT) Notify me about progress for that task (N-ACTION Subscribe) Give me the result details of the task (N-GET these attribute values)

Watch Workflow No central controller Workstation watches flow of N-EVENTs: “System X did A”, “System Y did B” Workstation decides “Hmmm, I think I will do C” Workstation creates a UPS for itself Interested Subscribers are notified of Workstation activity via N-EVENT; N-GET details as needed Similar to Ad hoc/Unscheduled Tasks Examples: CAD workstation sees N-EVENT that Mammo Acq. is complete; decides to do CAD processing Reporting station sees N-EVENT that CAD is complete; decides to queue reading worklist for that study

IHE Post-Acquisition Workflow IHE PAWF builds on DICOM UPS Essential Profile Features: Worklist managed processing –Automated & manual Progress notifications –Any interested system (RIS, Billing, Reading Worklist, Dashboard, Analytics) –Subscription-based Cancelation requests –With reason & contact Hosted applications (“DICOM plugins”) 21 Workitem Manager Workitem Performer Watcher Image Manager Workitem Creator Hosting System Hosted App DSS / Order Filler

DICOM Application Hosting Separate the application from the infrastructure Infrastructure (Hosting Systems) move and store data & results, and manage workflow Applications process and analyze that data, and provide results back to the infrastructure Minimize ‘reinvention of the wheel’. (See DICOM PS3.19) L. Tarbox - Analytic Workflow: From Images to Reports

Unix, Mac, PCInte r net ServerCommercial Vendor #2 … Commercial Vendor #1 Standard API One App, Many Hosts Portable applications ‘ plug into ’ any host that implements the standardized ‘ socket ’ L. Tarbox - Analytic Workflow: From Images to Reports

Benefits of Application Hosting Users One workstation supports any needed functionality Mix and Match applications from multiple providers IT Administrators Tired of changing infrastructure to accommodate new workstations simply to add functionality Application Developers Don’t have to re-write applications for dozens of workstations in the market Workstation Vendors Expand their list of offered applications without development effort L. Tarbox - Analytic Workflow: From Images to Reports

Typical Pull Workflow –Query, Claim, Update, Complete Input / Output References –Local to Performer; Local Image Manager; Other Image Manager Hosted applications (plugins) –Performer may choose to be a Hosting System –Apps may be 3 rd party 25 Workitem Manager Workitem Performer Image Manager Hosting System Hosted App Query Get Claim Retrieve Store Update Complete Start App Start Task Finalize Task Perform UPS Workitems

By Workitem Manager –Internal logic –Triggered by DSS/Order Filler scheduling –Triggered by Image Manager Data By Workitem Creator –Explicit create request –Can be grouped with any relevant system By Workitem Performer –Explicit create request –“Unscheduled”/Self-scheduled/Ad Hoc 26 Workitem Manager Workitem Performer Image Manager Workitem Creator DSS / Order Filler Create Procedure Scheduled Availability Query Procedure Updated Availability Notification Create Create UPS Workitems

Subscribe / Unsubscribe –Globally or for Individual Workitems Applications/Usage –Schedule subsequent tasks –Report progress –Bill for performed tasks –Populate reading worklist –Drive dashboard –Analyze dept. performance –Claim assigned workitems 27 Workitem Manager Workitem Performer Watcher Query Manage Subscriptions Send Notification… Created Claimed Progress Updated Completed Created for WP1 Monitor UPS Workitems

Cancel UPS Workitems Workitem Manager –Can directly cancel unclaimed workitems –Otherwise notifies Performer Workitem Performer –Cancels at its own discretion Watcher –Waits for Notification task was either Completed or Canceled 28 Workitem Manager Workitem Performer Watcher Workitem Creator Request Cancel Send Notification… Canceled Cancel Requested Canceled

Applications

Various co-existing patterns possible Top-down Original order invokes full set of UPS E.g. Protocol code -> standard processing; dept. policy Daisy chain Each step completion triggers next UPS Push, Pull & Watch variants Ad Hoc Performance Performing system self-schedules own UPS E.g. human has initiated processing Ad Hoc Request E.g. Radiologist decides additional work-up is required; Reporting system creates UPS Scheduling Post-Processing

Notifications of processing tasks Both pre-planned and ad hoc Associate by accession # Can monitor UPS creation and completion Processing outputs = Reporting inputs Full set of instances is identified Storage/retrieval location identified Input Readiness State flag Feeding into Reporting

Billing System = Watcher Notifications of processing tasks What has (actually) been performed What has been canceled When was it done Linked to patient ID & accession # Who ordered it Billing for Post-processing

IHE Remote Radiology Reporting Workflow (RRR-WF) 33 Academic Specialist Reporting Worklist “Nightthawk” Radiologist Central Hospital

Remote Radiology Reporting Workflow (RRR-WF) Worklist model Scheduled tasks Relationship to Patient, Order, Workflow Lists of inputs and outputs Notification of Progress/completion Data flow can use: XDS, XDS-I DICOMweb WADO, STOW DICOM C-STORE, C-MOVE UPS-RS for Reporting Task Manager A repository Watcher  Open Event Channel [RAD-Y1]  Send UPS Notification [RAD-87]  Query UPS Workitems [RAD-81]  Get UPS Workitem [RAD-83]  Claim UPS Workitem [RAD-82]  Update UPS Workitem [RAD-84]  Complete UPS Workitem [RAD-85]  Request UPS Cancelation [RAD-88]  Manage UPS Subscription [RAD-86] Task Requester  Create UPS Workitem [RAD-80]  Request UPS Cancelation [RAD-88]  Manage UPS Subscription [RAD-86]  Get UPS Workitem [RAD-83]  Open Event Channel [RAD-Y1]  Send UPS Notification [RAD-87] Task Performer ← Open Event Channel [RAD-Y1] → Send UPS Notification [RAD-87] ← Manage UPS Subscription [RAD-86] A consumer → Retrieve Imaging Data → Store Report → Retrieve Report A consumer A creator

UPS-RS for Reporting

dicom.nema.orgdicom.nema.org -> The DICOM Standard Part 4,Annex CC Part 3,C.30 Part 17, Annex BBB -> Technical Frameworks Scheduled Workflow.b Profile Post-Acquisition Workflow Profile Remote Radiology Reporting Workflow Profile and many more… References

UPS Deletion Locks Reliable Watcher (SCU) Problem: SCP might delete a completed UPS before SCU gets needed details (e.g. due to Network latency or outage) Missing a UPS could prevent Watcher from: monitoring completion extracting details creating subsequent UPS Instances, referencing UPS 1 outputs as UPS 2 inputs Mechanism  SCU Sets a Deletion Lock flag during subscription  SCP can’t delete UPS with outstanding Deletion Locks  SCU removes Deletion Lock after retrieving final state of UPS  SCP free to delete UPS after all deletion locks removed  SCP documents how it handles orphans

UPS are transient but can be locked/logged Time scheduled Time started Time completed Even intermediate progress for some tasks Track various activities Image import, special reconstructions, automated processing, QC, image export SWIM

UPS Re-Assignment If you’ve put it In-progress Cancel your workitem & Create a replacement workitem (copy the details from the original) Alternatively (trickier) Communicate the Transaction ID (“secret key”) to the system that is taking over.

UPS Profiling Use cases will drive configuration parameters Codes for work tasks (RadLex, DICOM, Site, …) Object types to be provided as input and as output Names of worklists managed by worklist manager Profiling = Use case driven specification of use of standards First example is Radiotherapy, DICOM Part 17 Annex BBB

Deployment Supported in some toolkits & open source Radiotherapy Incorporated in IHE RO Profiles Released in Products (see IHE Integration Statements) Radiology