Lecture 12. Potential Energy Surface

Slides:



Advertisements
Similar presentations
Laurea specialistica in Scienza e Ingegneria dei Materiali
Advertisements

Introduction to Computational Chemistry NSF Computational Nanotechnology and Molecular Engineering Pan-American Advanced Studies Institutes (PASI) Workshop.
ChE 452 Lecture 16 Quantum Effects In Activation Barriers 1.
Potential Energy Surface. The Potential Energy Surface Captures the idea that each structure— that is, geometry—has associated with it a unique energy.
Introduction to Molecular Orbitals
Computational Chemistry
Lecture 23 Born-Oppenheimer approximation (c) So Hirata, Department of Chemistry, University of Illinois at Urbana-Champaign. This material has been developed.
Week 1: Basics Reading: Jensen 1.6,1.8,1.9. Two things we focus on DFT = quick way to do QM – 200 atoms, gases and solids, hard matter, treats electrons.
1 Cold molecules Mike Tarbutt. 2 Outline Lecture 1 – The electronic, vibrational and rotational structure of molecules. Lecture 2 – Transitions in molecules.
Separating Electronic and Nuclear Motions The Born-Oppenheimer Approximation All Computational Chemistry rests on a fundamental assumption called.
Molecular Modeling: Molecular Vibrations C372 Introduction to Cheminformatics II Kelsey Forsythe.
Quantum Mechanics Discussion. Quantum Mechanics: The Schrödinger Equation (time independent)! Hψ = Eψ A differential (operator) eigenvalue equation H.
Case Studies Class 5. Computational Chemistry Structure of molecules and their reactivities Two major areas –molecular mechanics –electronic structure.
Molecular Simulation. Molecular Simluation Introduction: Introduction: Prerequisition: Prerequisition: A powerful computer, fast graphics card, A powerful.
Lecture 5 The Simple Harmonic Oscillator
Potensial Energy Surface Pertemuan V. Definition Femtosecond spectroscopy experiments show that molecules vibrate in many different directions until an.
Lecture # 8 Quantum Mechanical Solution for Harmonic Oscillators
Chemistry 6440 / 7440 Vibrational Frequency Calculations.
Femtochemistry: A theoretical overview Mario Barbatti III – Adiabatic approximation and non-adiabatic corrections This lecture.
Potential Energy Surfaces
Chemistry 6440 / 7440 Computational Chemistry and Molecular Modeling.
Quantum Springs. Harmonic Oscillator Our next model is the quantum mechanics version of a spring: Serves as a good model of a vibrating (diatomic) molecule.
Objectives of this course
Introduction. What is Computational Chemistry?  Use of computer to help solving chemical problems Chemical Problems Computer Programs Physical.
Geometry Optimisation Modelling OH + C 2 H 4 *CH 2 -CH 2 -OH CH 3 -CH 2 -O* 3D PES.
Molecular Information Content
ChE 452 Lecture 24 Reactions As Collisions 1. According To Collision Theory 2 (Equation 7.10)
Lecture 6. Many-Electron Atoms. Pt.4. Physical significance of Hartree-Fock solutions: Electron correlation, Aufbau principle, Koopmans’ theorem & Periodic.
Rate Theories of elementary reaction. 2 Transition state theory (TST) for bimolecular reactions Theory of Absolute reaction Rates Theory of activated.
Ch 9 pages Lecture 22 – Harmonic oscillator.
Quantum Chemistry (Computational Chemistry) Instructor: Yun Hee Jang MSE 302, 2323) Web:
(1) Experimental evidence shows the particles of microscopic systems moves according to the laws of wave motion, and not according to the Newton laws of.
Coordinate Systems for Representing Molecules : Cartesian (x,y,z) – common in MM 2. Internal coordinates (Z-matrix) – common in QM ** It is easy.
MODELING MATTER AT NANOSCALES 3. Empirical classical PES and typical procedures of optimization Classical potentials.
Quantum Chemistry: Our Agenda (along with Engel)
Simple Harmonic Oscillator (SHO) Quantum Physics II Recommended Reading: Harris: chapter 4 section 8.
1 Statistical Mechanics and Multi- Scale Simulation Methods ChBE Prof. C. Heath Turner Lecture 18 Some materials adapted from Prof. Keith E. Gubbins:
1 CE 530 Molecular Simulation Lecture 14 Molecular Models David A. Kofke Department of Chemical Engineering SUNY Buffalo
Lecture 10. Chemical Bonding. H 2 Molecule References Engel, Ch. 12 Ratner & Schatz, Ch. 10 Molecular Quantum Mechanics, Atkins & Friedman (4th ed. 2005),
Chemistry 700 Lectures. Resources Grant and Richards, Foresman and Frisch, Exploring Chemistry with Electronic Structure Methods (Gaussian Inc., 1996)
Lecture 13. Geometry Optimization References Computational chemistry: Introduction to the theory and applications of molecular and quantum mechanics, E.
MSc in High Performance Computing Computational Chemistry Module Introduction to the Course Paul Sherwood CCLRC Daresbury Laboratory
Lecture 5. Many-Electron Atoms. Pt
Developing a Force Field Molecular Mechanics. Experimental One Dimensional PES Quantum mechanics tells us that vibrational energy levels are quantized,
Lecture 8. Chemical Bonding
2/09/2015PHY 752 Spring Lecture 111 PHY 752 Solid State Physics 11-11:50 AM MWF Olin 107 Plan for Lecture 11: Reading: Chapter 9 in MPM Approximations.
1/28/2015PHY 7r2 Spring Lecture 61 PHY 752 Solid State Physics 11-11:50 AM MWF Olin 107 Plan for Lecture 6: Reading: Chapter 6 in MPM; Electronic.
Computational Biology BS123A/MB223 UC-Irvine Ray Luo, MBB, BS.
Geometry Optimizations Lecture CompChem 2 Chemistry 347 Hope College.
Ch.1. Elementary Quantum Chemistry
Molecular Bonding Molecular Schrödinger equation
One Dimensional Quantum Mechanics: The Free Particle
CHAPTER 5 The Schrodinger Eqn.
Quantum One.
Ψ
Perturbation Theory Lecture 5.
Molecular Mechanics Molecular Dynamics.
Physical Chemistry Week 12
Scattering Theory: Revised and corrected
Quantum states of a diatomic molecule H2+ with stationary nuclei
Quantum Chemistry / Quantum Mechanics
Solution of the differential equation Operator formalism
PHY 752 Solid State Physics
Department of Electronics
Molecular Spectra By – P.V.Koshti.
Perturbation Theory Lecture 5.
By- Prof. R.S. Gupta GOVERNMENT (AUTONOMOUS) P.G. COLLEGE
Car Parrinello Molecular Dynamics
Atilla Ozgur Cakmak, PhD
The Harmonic Oscillator
Presentation transcript:

Lecture 12. Potential Energy Surface References Computational chemistry: Introduction to the theory and applications of molecular and quantum mechanics, E. Lewars (2004) Chapter 2.4-2.5 Molecular Modeling, A. R. Leach (2nd ed. 2001), Chapter 5 (pp.250-273) Essentials of computational chemistry. Theories and Models, C. J. Cramer, (2nd Ed. Wiley, 2004) Chapter 2.4 Introduction to Computational Chemistry, F. Jensen (1999), Chapter 14

Quantum Mechanical Origins Schrödinger equation, fundamental to everything wave function H = Hamiltonian operator Time-independent form Born-Oppenheimer approximation Electrons relax very quickly compared to nuclear motions. Nuclei move in presence of potential energy obtained by solving electron distribution for fixed nuclear configuration, which is still very difficult to do routinely. Usually nuclei are heavy enough to treat classically. Nuclear coordinates Electronic coordinates

Born-Oppenheimer Approximation & Potential Energy Surface

Potential Energy Curve (1-Dimensional) B R E = E(R) Simplest form: Harmonic Oscillator Simplified

Potential Energy Surface (2-Dimensional) q R E = E(R,θ) Sliced to make 1D curve Sliced to make 1D curve (R fixed or optimized) (θ fixed or optimized)  Potential Energy Hypersurface (N-Dimensional)

1D Slice of Potential Energy Hypersurface Example: Torsional Energy Curve Torsion: dihedral angle (for A-B-C-D bond) fixed or optimized

(Equilibrium structure) Geometry optimization Stationary point. Minimum Energy minimum (Equilibrium structure) Energy minimization Geometry optimization A stone will roll down. A stone will stay. for all q for all q

Stationary point. Transition State * Minimum (isomer, confomer, reactant, product) Transition state (linking two minima) for all q for only one q (reaction coordinate) for other q’s Intrinsic reaction coordinate (IRC)

Stationary points in PES (Geometry optimization, Transition state search)