Daniel POP West University of Timisoara

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Presentation transcript:

Daniel POP West University of Timisoara Mediu Virtual de Cercetare pentru știinte naturale, climatologie și conservarea patrimoniului cultural Daniel POP West University of Timisoara The VI-SEEM project initiative is co-funded by the European Commission under the H2020 Research Infrastructures contract no. 675121

PSC03 meeting – Belgrade 19-20 October 2016 2 VI-SEEM Members Map created using http://philarcher.org/diary/2013/euromap/, Attribution-Share Alike 3.0 Unported PSC03 meeting – Belgrade 19-20 October 2016 2

PSC03 meeting – Belgrade 19-20 October 2016 3 VI-SEEM In a figure PSC03 meeting – Belgrade 19-20 October 2016 3

PSC03 meeting – Belgrade 19-20 October 2016 4 Objectives (1) Provide scientists with access to state of the art e-Infrastructure - computing, storage and connectivity resources - available in the region; and promote additional resources across the region. Infrastructure – 21500 CPU cores, 325000 GP-GPU cores and 18500 Intel Xeon Phi cores of HPC, 2900 grid cores, 10500 cloud VM cores, 11 PBytes of storage Integrate the underlying e-Infrastructure layers with generic/standardised as well as domain-specific services for the region. Promote capacity building in the region and foster interdisciplinary approaches Goal: minimum of 39 distinct applications and 45 research teams using the VRE PSC03 meeting – Belgrade 19-20 October 2016 4

PSC03 meeting – Belgrade 19-20 October 2016 5 Objectives (2) Provide functions allowing for data management for the selected Scientific Communities minimum of 30 distinct data sets Provide adequate user support and training programmes Enable research activities of international standing in the selected fields of Climatology, Life Sciences and Cultural Heritage PSC03 meeting – Belgrade 19-20 October 2016 5

PSC03 meeting – Belgrade 19-20 October 2016 6 Objectives PSC03 meeting – Belgrade 19-20 October 2016 6

PSC03 meeting – Belgrade 19-20 October 2016 7 Operational Services Infrastructure Provision of HPC, Cloud and Grid resources Operational services VI-SEEM Code repository Used to upload source codes produced in the context of the project, or host source code from communities https://code.vi-seem.eu/ VI-SEEM Service Catalogue Used to provide information about VI-SEEM Services to end users as well as for managing the service portfolio internally https://services.vi-seem.eu/ VI-SEEM Login The AAI infrastructure of the project. https://aai.vi-seem.eu VI-SEEM Helpdesk: https://support.vi-seem.eu PSC03 meeting – Belgrade 19-20 October 2016 7

PSC03 meeting – Belgrade 19-20 October 2016 8 Data Services VI-SEEM Simple Storage Used to store simple files, important for everyday use and collaboration STATUS: Available and integrated with VI-SEEM Login VI-SEEM Repository Used as a generic loner term dataset repository VI-SEEM Search Used to consolidate all data sets (via metadata harvesting) that are available to VI-SEEM STATUS: Available PSC03 meeting – Belgrade 19-20 October 2016 8

PSC03 meeting – Belgrade 19-20 October 2016 9 Data Services VI-SEEM Archiving For safe archiving of large data sets STATUS: Work in progress VI-SEEM Work Storage Used to transfer files among HPC centers for processing in HPC apps STATUS: Work in progress Data analytics Used to process data using Hadoop STATUS: Needs to be added to the service catalogue PID Service Used to generate permanent ID STATUS: Available but not integrated yet with the rest of the services PSC03 meeting – Belgrade 19-20 October 2016 9

PSC03 meeting – Belgrade 19-20 October 2016 10 Application Services VRE Platform (http://vre.vi-seem.eu) The main entry point for the user communities of the region and beyond STATUS: Available Scientific Application Environment Software modules that are installed and optimized for the use by the communities STATUS: In production. To be added to the service catalogue. Workflow and Software tools Used to provide a series of “processes” for scientific simulations STATUS: Workflows are available as documents PSC03 meeting – Belgrade 19-20 October 2016 10

PSC03 meeting – Belgrade 19-20 October 2016 11 Application Services Regional community datasets Used to share research data sets STATUS: Some exist and they are stored in different services i.e. Clowder, LAS, VI-SEEM repo, or remote community repositories, need to be integrated with VI-SEEM Search service. Application Level Services Application specific services STATUS: Clowder (for Cultural Heritage), Live Access Server (for Climate) and ChemBioServer (for Life Sciences) are available. Need to identify new ones and add all of them to the service portfolio PSC03 meeting – Belgrade 19-20 October 2016 11

VRE Content for Climate Community VRE Portal Up and Running Scientific application environment: Added Optimized applications and libraries for Climate Community List of codes added Regional Community Datasets Added Regional Climate Simulation Datasets from Cyprus and Bulgaria https://vre.vi-seem.eu/index.php/regional-community-datasets/climate-datasets Application-Level Services for the regional communities: Live Access Server up and running 12

Live Access Server (LAS) LAS up and running on local server at CyI: http://las.vi-seem.eu LAS enables end-users to visualize data with on-the-fly graphics, request custom subsets of variables in a choice of file formats, access background reference material about the data (metadata), and compare (difference) variables from distributed locations. Rich Initial content Feature datasets from global data repositories Include regional data readily available LAS Implementation workflow added to VRE LAS tutorial added to Training Portal (https://training.vi-seem.eu/) Allow remote data hosting & access: Aim to allow individual sites to host data Individual partners can run interconnected LAS or just serve data through open protocols LAS Virtual Machine Image produced to be made available on VRE <Event> – <Place> <Date (DD-Month-YYYY)> 13

<Event> – <Place> <Date (DD-Month-YYYY)> 14 LAS features Highly configurable server designed to provide flexible access to geo-referenced scientific data. Present distributed data sets as a unified virtual data base through the use of DODS networking. Ferret is the default visualization application used by LAS, though other applications (Matlab, IDL, GrADS, ...) can also be used. Can also export to Google Earth (still in beta). <Event> – <Place> <Date (DD-Month-YYYY)> 14

<Event> – <Place> <Date (DD-Month-YYYY)> 15 LAS functionality LAS enables the web user to: visualize data with on-the-fly graphics request custom subsets of variables in a choice of file formats access background reference material about the data (metadata) compare (difference) variables from distributed locations LAS enables the data provider to: unify access to multiple types of data in a single interface create thematic data servers from distributed data sources offer derived products on the fly remedy metadata inadequacies (poorly self-describing data) offer unique products (e.g. visualization styles specialized for the data) <Event> – <Place> <Date (DD-Month-YYYY)> 15

<Event> – <Place> <Date (DD-Month-YYYY)> 16 LAS GUI <Event> – <Place> <Date (DD-Month-YYYY)> 16

Romanian applicaitons BVL (Banatica Virtual Library), Biblioteca Centrala Universitara “Eugen Todoran” 1st integration phase Banatica collection 1000+ bibliographical references 200 digitized books Integrated in Clowder platform Running OCR – Work in progress for the next 6 months HIRECLIMS, Administratia National de Meteorologie 2nd integration phase gridded dataset from observations consisting of 9 essential climate variables with daily values (1961-2013) on a spatial resolution of 10 km for the Romanian territory (ROCADA) access to resources has been granted need to (re)start <Event> – <Place> <Date (DD-Month-YYYY)> 17

PSC03 meeting – Belgrade 19-20 October 2016 18 1st Call for Projects 1st call important Dates: Opening date: 14th October 2016 Closing Date: 14th November 2016 Clarification provided by applicants if needed: 18th November 2016 Allocation decision: January 2017 Allocation Start Date of awarded proposals: January 2017 Allocation end date of award: January 2018 for computational services, January 2019 for some data services. Final report from successful projects: May 2017 2nd call will be launched begin of 2017 3rd call will be launched end of 2017 PSC03 meeting – Belgrade 19-20 October 2016 18

Climate Research Open Call Areas Open Calls in the scientific field of Climate Research:  CR Area A: Regional climate modelling to better understand and predict climate change and impacts, and phenomena such as dust storms. CR Area B: Air quality modelling, including atmospheric chemistry and air pollution transport. CR Area C: Weather forecast and extreme weather prediction, model development, application. <Event> – <Place> <Date (DD-Month-YYYY)> 19

<Event> – <Place> <Date (DD-Month-YYYY)> 20 To conclude Regional Datasets Storage and computational resources Live Access Server Apply for next Open Calls for Projects <Event> – <Place> <Date (DD-Month-YYYY)> 20