2009. 04. 14 NJSDGP003_부미경 PCR 1. Sample list 2. Primer list.

Slides:



Advertisements
Similar presentations
Diagnosis with PCR This is a preparation of DNA. We zoomed in a portion of a gene. We know that two primers, Forward and Reverse, will hybridize at specific.
Advertisements

PCR Techniques. Basics of PCR Primers –15-60bp (60bp is limit synthesized by IDT) –Annealing temp ideally >55C (portion that anneals to your template)
Troubleshooting DNA Sequences: Guidelines and Suggestions.
1 st Strand Synthesis in Reverse Transcription AAAAAAAA 3’ N6 TTT TTTTT 5’ 5’ 3’ Random primer Oligo(dT) primer Sequence specific primer 1 st strand cDNA.
1 Vol. 01. p Vol. 01. p Vol. 01. p.20.
1 Vol. 03. p Vol. 03. p Vol. 03. p.21.
1 Vol. 02. p Vol. 02. p Vol. 02. p.19.
1 Vol. 03. p Vol. 03. p Vol. 03. p.16.
1 Vol. 02. p Vol. 02. p Vol. 02. p.30.
Detection of the human Mitochondrial DNA A Polymerase Chain Reaction Experiment.
1 Vol. 03. p Vol. 03. p Vol. 03. p.35.
1 Vol. 02. p Vol. 02. p Vol. 02. p.10.
1 Vol. 01. p Vol. 01. p Vol. 01. p.14.
DNA Science Day 1 Amplifying and Cutting Physical Biology Bootcamp October 2006 Caltech.
DNA Science Day 1 Amplifying and Cutting APh162 Winter 2005 Caltech.
Working summary Wang Qian. Analyse the 16SrDNA fragment by DGGE The samples come from China. DNA extraction : use the Wizard Genomic DNA Purification.
The polymerase chain reaction (PCR) rapidly
1. Sample & Primer CEDDGP001- 카톨릭의대 정의달 * 총 10 개 샘플중에서 4, 14, 24, 28, 36 샘플에 대해서만 PCR 실험을 수행하였다. PCR 실험 수행시 DNA 농도를 100ng/ul 로 희석하여 사용하였다.
PCR POLYMERASE CHAIN REACTION Dauphin Island Graduate Neurobiology.
Progress Report 10/7/14. Projects Expression of iGluRs in Xenopus Oocyte Color Choice Behavior Assay – Generation of Positive Control Lines.
DNA Methylation mapping
PCR condition EF taq Tm : 45~60 ℃ Template : gDNA 2 95 ℃ 2 min 95 ℃ 30 sec Tm 20 sec (30cycles) 72 ℃ 4 min 72 ℃ 5 min 4 ℃ 연대의대 소아과 - PCR results (gDNA.
Polymerase Chain Reaction (PCR) Developed in 1983 by Kary Mullis Major breakthrough in Molecular Biology Allows for the amplification of specific DNA fragments.
Lab meeting Noh ji eun. Calreticulin PCR purification -AccuPrep PCR purifiction kit -Components Buffer 1 (PCR Binding buffer) 250 ㎕ Buffer.
Chapter 08 Author: Kelly Elkins © 2013 Elsevier, Inc. All rights reserved.
Polymerase Chain Reaction Aims  To understand the process of PCR and its uses. Starter - Match each term with its correct description (work in pairs)
NYKRCP004 RT- PCR report PCR Condition Temp.TimeCyclesFinal Reaction vol. 45 ℃ 30min1 50ul 95 ℃ 15min 1 95 ℃ 30sec ℃ 30sec 72 ℃ 40sec.
Biotechniques. DNA sequencing To determine the base sequence of DNA fragments. DNA replicated into smaller fragments incorporating fluorescent tags Fragments.
The polymerase chain reaction
Amplification of a DNA fragment by Polymerase Chain Reaction (PCR) Ms. Nadia Amara.
Detection of the human VNTR using PCR* *A Polymerase Chain Reaction Experiment.
SPECIFICITY and SENSITIVITY – Performance of Applied Conventional PCR Assays Supplementary Table 3: All microbial reference strains that were applied in.
Practical exam  Preparatory period: 30 minutes  Exam period: 2 hours  4 tasks  Task 1: Prepare a single solution  Task 2: Setup a PCR  Task 3: Design.
Today House Keeping Plasmid extraction, EcoRI digest PCR plants 15.ppt Bianca/microarrays (gels)
Introduction to PCR Polymerase Chain Reaction
Lab 22 Goals and Objectives: EDVOKIT#300: Blue/White Cloning of a DNA Fragment Calculate transformation efficiencies Compare control efficiency to cloned.
PCR mediated mutagenesis 2013 년도 2 학기 생화학 실험 (2) 5 주차 조교 : 안성원.
이희두. Polymerase Chain Reaction  Technique widely used in molecular biology  With PCR it is possible to amplify a single or few copies of DNA across.
M Gradient PCR using Taq polymerase with 125ng primer concentration M: 1 kb ladder 1: 60°C 2: 62°C 3: 64.4°C 4:66.8°C 5: 69.2°C 6:71.5°C 284D.
QIAmp kit can also be used for samples of less than 180 mg (e.g., forensic samples). In such cases, follow one of the standard protocols, without.
Introduction to PCR Polymerase Chain Reaction
PCR & visualise products on gel
PCR conditions: 94ºC for 15 min
L bp 500 bp 250 bp Annealing Temperature in Degrees C V4 16s – 506f-Y/806rB ITS2 – ITS3NGS_mix/ITS4NGS.
Overview Wednesday Thursday Labs 12, 13 & 14 due March 7th
ST gDNA prep groups Ethidium bromide causes cancer!!
PCR Polymerase Chain Reaction
Gradient PCR using Taq polymerase with 125ng primer concentration
PCR uses polymerases to copy DNA segments.
3. PCR Page 376 – 377.
PCR-based genotyping assays
© 2013 Elsevier, Inc. All rights reserved.
الفعل ورد الفعل ♠ ♠ ♠ مجلس أبوظبي للتعليم منطقة العين التعليمية
ChIP DNA Sample Preparation
PCR uses polymerases to copy DNA segments.
PCR uses polymerases to copy DNA segments.
EDLC(Embedded system Development Life Cycle ).
Implications of Using the ND1 Gene as a Control Region for Real-Time PCR Analysis of Mitochondrial DNA Deletions in Human Skin  Andrew Harbottle, Kim.
Introduction to Polymerase Chain Reaction (PCR)
Restriction Enzyme Digestions
Martin J. Somerville, Kathleen A. Sprysak, Mark Hicks, Basil G
PCR uses polymerases to copy DNA segments.
C.2.10 Sample Questions.
C.2.8 Sample Questions.
PCR uses polymerases to copy DNA segments.
C.2.8 Sample Questions.
PCR uses polymerases to copy DNA segments.
Genomic DNA Sample Preparation
MLST analysis of Bacillus strains of this study and related species of the B. cereus sensu lato group. MLST analysis of Bacillus strains of this study.
PCR uses polymerases to copy DNA segments.
Presentation transcript:

2009. 04. 14 NJSDGP003_부미경 PCR 1. Sample list 2. Primer list

NJSDGP003_부미경 PCR 3. PCR condition 3-1. PCR Condition 2009. 04. 14 NJSDGP003_부미경 PCR 3. PCR condition 3-1. PCR Condition 3-3. PCR Reaction Combination Temp. Time Cycles Final Reaction vol. 94 ℃ 5 min 1 25ul 30 sec 30 55 ℃ 1 min 72 ℃ 72℃ 7 min 4℃ Storage

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-arc 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-arc 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-aroE 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-aroE 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-glpF 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-glpF 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-gmk 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-gmk 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-pta 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-pta 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-tpi 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-tpi 1 2 3 4 5 6 7 8 9 10 11 12 13 1415 16 17 18 1920 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 52 5354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-yqiL 2% 0.5x TAE gel 2009. 04. 14 NJSDGP003_부미경 PCR 4. The Result of PCR- Primer-yqiL 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 1819 20 21 22 23 24 25 2627 28 29 30 31 32 33 34 35 36 37 38 39 4041 42 43 4445 46 47 48 4950 51 525354 55 56 5758 59 60 6162 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-arc purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-arc purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-aroE purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-aroE purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-glpF purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-glpF purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-gmk purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-gmk purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-pta purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-pta purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-tpi purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-tpi purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 50ng 57 58 59 60 61 62 63 2% 0.5x TAE gel

NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-yqiL purify 후 2009. 04. 14 NJSDGP003_부미경 PCR 5. The Result of PCR- Primer-yqiL purify 후 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 50ng 41 42 43 44 45 46 47 48 57 58 59 60 61 62 63 49 50 51 52 53 54 55 56 50ng 2% 0.5x TAE gel