Detectives with tail (Bacteriophages) explain the diversity of Salmonella in animal systems in Chile. IS017 D Rivera1, V Toledo2, F Dueñas2, R Tardone2,

Slides:



Advertisements
Similar presentations
Understanding the Microbiology of Hen Housing Systems Deana R. Jones, PhD Egg Safety and Quality Research Unit USDA Agricultural Research Service Athens,
Advertisements

POSTER 82 CXCR4 using HIV-1 strains more abundant in PBMC than in plasma Chris Verhofstede 1 *, Linos Vandekerckhove 2, Veerle van Eygen 3, Kenny Dauwe.
Dangerous Dublin: The Virulent Salmonella Colette O’ Hare 1, Conor Burke 2, Suzanne Gray 3, Niall Delappe 1, Ger Doran 1, Grainne McHale 2, Dr. Gerard.
Detection and Enumeration of Food Pathogens with the BAX® PCR System Thomas P. Oscar, Ph.D. Research Food Technologist Welcome……thank you for coming!
Recombinant DNA Technology
Description of the enzymatic browning in avocado slice using GLCM image texture Stefany Cárdenas, Roberto Quevedo*, Emir Valencia and José Miguel Bastías.
Study of the role of L-Idonate Dehydrogenase in tartaric acid biosynthesis during table grape development Cinthya Araneda 1, Mauricio González-Agüero 2,
Molecular identification of Cryptosporidium species infecting Wisconsin dairy calves Department of Biology University of Wisconsin–Eau Claire Matt Brewer,
Pathogen Reduction Dialogue Panel 1 May 6, 2002 Food Safety Pathogens on the Farm David A. Dargatz DVM PhD USDA:APHIS Centers for Epidemiology and Animal.
EUROPEAN CONGRESS OF CHEMICAL ENGINEERING – ECCE 6 Characterization of an Extracellular lipase from Yarrowia lipolytica A.I.S. Brígida a, P.F.F. Amaral.
Escherichia coli O157:H7 and Shiga toxin-converting bacteriophage Edward G. Dudley, Ph.D Department of Food Science
Department of Food Science
F A C U L T Y O F L I F E S C I E N C E S U N I V E R S I T Y O F C O P E N H A G E N Sequence and comparative analysis of Leuconostoc dairy bacteriophages.
Molecular Genetics Lab Review. Bacterial Transformation Genetic transformation—host organism takes in and expresses foreign DNA Genetic engineering—manipulation.
DNA Technology. Overview DNA technology makes it possible to clone genes for basic research and commercial applications DNA technology is a powerful set.
Purification and Analysis of the Mycobacteriophage Moses Amy E. Schade & Stephanie E. Simon, Department of Biological Sciences, College of Arts and Sciences.
Taxonomy Species Concepts, & Biological Diversity EEOB September 2004.
By: Kayla Kotosky.
Salmonella enterica Bredeney: Third commonest cause of human infection in Ireland in 1999 C. A. O’ Hare, M. Cormican. G. Corbett-Feeney, S. Fanning and.
Prevalence of Cytochrome p450 CYP2C9*2 and CYP2C9*3 in the York Hospital Blood Bank. Andy Ngo Department of Biological Sciences, York College Introduction.
7-9 Scatter Plots Course 2 Warm Up Warm Up Problem of the Day Problem of the Day Lesson Presentation Lesson Presentation.
Shotgun sequencing reveals transkingdom alterations in immunodeficiency associated enteropathy Xiaoxi Dong (Oregon State University), Jialu Hu (Oregon.
EXPERIMENTAL APPROACH Series I: Isolation and Purification of Phage 1. We created an enrichment culture in order to grow bacteriophages and ultimately.
AP Biology What do you notice about these phrases? radar racecar Madam I’m Adam Able was I ere I saw Elba a man, a plan, a canal, Panama Was.
Confirmation of the Gene Cassette Swap of AR1 Tail Fibers to T4K10 Bacteriophage Using Genotypic and Phenotypic Methods Kassandra Willingham Department.
Musack Phage By: Ashley Johnson. Intro o Phage are viruses that infect bacteria o Phage are being looked at with the hope that they can be used to treat.
Geographical pattern of Q fever in Danish dairy cattle farms An epidemiological study of serological data from 2007 Material and methods Until 2003 antibodies.
Rob Edwards San Diego State University
Figure 1 : Soft agar overlay technique
Whole Genome Sequencing for Epidemiologists – A Brief Introduction
GENETIC MARKERS (RFLP, AFLP, RAPD, MICROSATELLITES, MINISATELLITES)
Ø Novel approaches for linkage mapping in dairy cattle
Meghan Hartwick, Cheryl Whistler, Erin Urquhart
Figure 1 : Soft agar overlay technique
N. NÓGRÁDY1, A. IMRE2, Á. KOSTYÁK3, J. PÁSZTI1 AND B. NAGY2
Phenotypic and genotypic typing of Salmonella enterica serovar Enteritidis isolates from poultry farms in Tunisia Guedda Intissar1, Abbassi Mohamed Salah1,
DIGESTION OF DNA WITH RESTRICTION ENZYMES
HIERARCHICAL CLASSIFICATION OF DIFFERENT CROPS USING
Heat tolerance responses to different thermal selection scenarios in the invasive fly, Drosophila subobscura. Luis E. Castañeda*, Angélica Jaramillo &
Salmonella Risk in Poultry Meat
Molecular study of two types of mutations in promoters of IL-2 and IL-10 genes in Iraqi patients with Tuberculosis Mazin S.Salman Awatif.
1-8 Scatter Plots Warm Up Problem of the Day Lesson Presentation
Salmonella Colonization Rates in Green Anoles of Southwest Louisiana
Surveillance of Foodborne Enteropathogen in Brazil
With Genetic Analyzers from Applied Biosystems
CYP3A Variation and the Evolution of Salt-Sensitivity Variants
Volume 137, Issue 2, Pages (August 2009)
Hyeshik Chang, Jaechul Lim, Minju Ha, V. Narry Kim  Molecular Cell 
Volume 23, Issue 4, Pages (April 2018)
Transcriptional Consequences of 16p11
Luisa De Sordi, Varun Khanna, Laurent Debarbieux  Cell Host & Microbe 
Volume 18, Issue 4, Pages (October 2015)
Plots of the number of sequences [log (x + 1) scale] from bacterial OTUs in both PCR replicates (PCR1 and PCR2) of the 348 wild rodents analyzed in the.
TED-Seq Identifies the Dynamics of Poly(A) Length during ER Stress
Volume 12, Issue 6, Pages (December 2003)
CYP3A Variation and the Evolution of Salt-Sensitivity Variants
Variable flagella expression among clonal toxin A−/B+ Clostridium difficile strains with highly homogeneous flagellin genes  H. Pituch, P. Obuch-Woszczatyñski,
Volume 14, Issue 7, Pages (February 2016)
Bacteria significantly correlated with DE miRNAs.
Changes in bacterial adhesion with hmLF addition and the purified glycan from hmLF. Changes in bacterial adhesion with hmLF addition and the purified glycan.
The Content of the Genome
Restriction Fragment Length Polymorphism (RFLP)
9-3 DNA Typing with Tandem Repeats
DES alters uterine gene expression primarily in the epithelium.
Alisdair R. Fernie, Jianbing Yan  Molecular Plant 
Minor variants expand the range of neonatal HSV-2 coding diversity.
Detection of spiked bacteria.
Phylogenetic tree of K. variicola from humans and animals.
Combination of pulsed-field gel electrophoresis (PFGE) and single-enzyme amplified fragment length polymorphism (SAFLP) for differentiation of multiresistant.
Volume 25, Issue 6, Pages e5 (June 2019)
Presentation transcript:

Detectives with tail (Bacteriophages) explain the diversity of Salmonella in animal systems in Chile. IS017 D Rivera1, V Toledo2, F Dueñas2, R Tardone2, C Hamilton-West2, C salazar2, D Peñaloza2, C Cáceres, P Soza2, A Moreno Switt2. 1 Escuela de Medicina Veterinaria. Universidad Andrés Bello, Santiago. Chile. 2 Departamento de Medicina Preventiva. Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile. Santiago. Chile. email: dacil.rivera@gmail.com INTRODUCTION Phages are the most abundant entities on the Earth, estimated in a magnitude of 1031. They also have a small genome, but always retaining the most successful genes for their evolution along with their host (Reyes et al, 2012). In order to explain the diversity of a system, it is very interesting to understand their presence and distribution, since they are considered excellent reporters of environments . Phages are biological entities very specific to their host, so their presence in the system is a reliable indicator of the presence of the host, which for our model corresponds to Salmonella. OBJECTIVE The objective of this study was to phenotypically characterize lithic Salmonella phages from cattle, birds and swines, either from backyard or industrial systems, birds from periurban systems, zoo reptiles and Altiplanic animals. METHODOLOGY 675 animal samples were analyzed for this study. Phage isolation was performed using the overlay method with 0.7% TSA, with a pre-enrichment using 4 strains of Salmonella hosts (Infantis, Heidelberg, Typhimurium and Enteritidis). Only lithic phages were selected. These phages were purified, titrated by spot method and stored at refrigeration temperature. Subsequently, they were characterized in terms of their host range using 26 different serotypes of Salmonella (Moreno et al, 2013). Results A Table 1. Number of isolated phage and Salmonella by host Salmonella Animal system Analyzed samples Number of Salmonella strain Number of phage isolated for host Salmonella Heidelberg Salmonella Infantis Salmonella Typhimurium Salmonella Enteritidis Total Backyard birds 35 31 9 15 43 63 Intensive cattle (Valdivia) 160 3 4 28 45 Intensive pork 36 11 5 8 22 Wild birds periurban 49 30 1 32 44 Wild birds wetlands 271 21 27 Reptilians 6 18 Altiplanic animals 13 Cattle Easter Island 47 10 75 90 total 675 99 25 48 24 250 343 B Table 2. Serotypes of host Salmonella more susceptible by system Figure 1. Number of isolated phages for Salmonella host Animal system Average lisis Salmonella serotypes more susceptible Cattle Easter Island 6,2 JAVIANA,HEILDERBERG,DUBLIN Y ENTERITIDIS Intensive cattle (Valdivia) 4 JAVIANA, DUBLIN Y ENTERITIDIS Backyard birds 4,6 Wild birds wetlands 6,7 PANAMA,MBANDAKA,NWPORT,BARANDERUP Wild birds periurban 3,5 JAVIANA,HEILDERBERG,DUBLIN Y ENTERITIDIS, 4,5,12:i:- Intensive pork 4,2 Reptilian 2,03 Altiplanic animals C TP: Backyard birds IP: Cattle Easter Island AS: Wild birds wetlands Figure 2. A. Heatmap of isolated phage from Easter Island cattle and Valdivia intensive bovine production systems both negative to Salmonella isolation. B. Heatmap of isolated phage from intensive pork, South American camelids and zoo reptilian. C. Phage of backyard birds, wild wetlands, wild peri-urban .The vertical axis is the Salmonella cluster, the horizontal axis is the phage cluster. Red represents lysis and blue don`t represent lysis Figure 3. Fragment Length Polymorphism RFLP. It shows different cutting patterns using the enzymes EcoI, EcoV, HindIII. Different patterns were found per system and was found to be insensitive among some phages from different systems. Conclusions The dynamics between phages and Salmonella, conditions the behavior of phages. In all the systems found phages of wide host range, the most extensive was the wild bird of wetlands. The most susceptible strains Salmonella, present in all the systems studied, were Enteritidis, Javiana and Typhimurium. It is important to be able to understand the role of phage-Salmonella dynamics in the different animal systems, since these systems are a source of maintenance, amplification and diversification of Salmonella enterica, considering that phages are one of the main engines of bacterial change. REFERENCIAS Reyes, A., Semenkovich, N. P., Whiteson, K., Rohwer, F., & Gordon, J. I. (2012). Going viral: next-generation sequencing applied to phage populations in the human gut. Nature Reviews Microbiology, 10(9), 607-617. Moreno Switt, A.I., den Bakker H, C.,Vongkamjan, K., Warnick, L, D., Cumming, K, J., and Wiedmann, M., 2013. Salmonella bacteriophage diversity reflects host diversity on dairy farms. Food Microbiol. 36, 275-285. Wongsuntornpoj, S., Moreno Switt, A.I., Bergholz, P., Wiedmann, M., Chaturongakul, S., 2014. Salmonella phages isolated from dairy farms in Thailand show wider host range than a comparable set of phages isolated from U.S. dairy farms. Vet. Microbiol. 172, 345–52. doi:10.1016/j.vetmic.2014.05.023 AGRADECIMIENTOS: Proyectos FONDECYT 11140108, Proyecto Regular UNAB DI-1300-16/RG and Martin Wiedmann (Cornell U.)