Bio-Inspired Metal-Oxo Catalysts for C–H Bond Functionalization

Slides:



Advertisements
Similar presentations
4th period d-block elements 4th Period. d-block elements  center block of periodic table transition elements d-sub level partially filled in one or more.
Advertisements

Oxidative Addition/Reductive Elimination
5 Slides About: Dioxygen Activation in Non-Heme Iron Enzymes Gerard Rowe University of South Carolina - Aiken.
NOTES: Unit 1-Basic Chem Review NAME HOUR.
The Organic Chemistry of Enzyme-Catalyzed Reactions Chapter 5 Dioxygenation.
Chapter 10. VSEPR - Lewis structures do not help us predict the shape or geometry of molecules; only what atoms and bonds are involved. To predict shape.
How does CFT measure up? I. Colours of Transition Metal Complexes
Organometallic Chemistry an overview of structures and reactions Peter H.M. Budzelaar.
Spinel Structures. CFT aids in understanding the arrangements of metal ions in spinel structures (R.C. Chpt.12). READ R.C. WHERE SPINEL STRUCTURES ARE.
Lecture 26 MO’s of Coordination Compounds MLx (x = 4,6) 1) Octahedral complexes with M-L s-bonds only Consider an example of an octahedral complex.
Chapter 1—An Introduction to Organic Chemistry and Carbon
Chapter 11 Chemical Bonds: The Formation of Compounds from Atoms Objectives: Describe the trends in the periodic table Describe the trends in the periodic.
INTRODUCTION OF D-BLOCK ELEMENTS. Why are they called d-block elements? Their last electron enters the d-orbital.
COORDINATION COMPOUNDS COMPLEX By s. r. ratnam.
The Chemistry of Life. Atoms The basic unit of matter Greek, atomos meaning “unable to cut” Named after Democritus...there has to be a limit =atom.
Christian R. Goldsmith Auburn University Department of Chemistry and Biochemistry.
The Kinetic Study of Oxidation Reactions of (TDFPP)FeIVO, Model Compound of Heme Iron Center in Cytochrome P450 Se Ryeon Lee Department of Chemistry Johns.
CHEM 7784 Biochemistry Professor Bensley
CARBON CARBON EVERYWHERE!! Macromolecules. Importance of carbon Single Double bonds with Oxygen Single Double bonds with Nitrogen Single Double Triple.
Chapter 9 Molecular Geometries and Bonding Theories
What determines an element’s chemistry. When atoms combine they form compounds. Electrons of an atom are found in different energy levels. Valence electrons.
BONDING THEORIES SCH4U Grade 12 Chemistry. Lewis Theory of Bonding (1916) Key Points:  The noble gas electron configurations are most stable.  Stable.
Organic Pedagogical Electronic Network Properties of Hydrogen Bonding Created by Max Taggart Edited by Margaret Hilton Honors Organic Chemistry Chem 2321.
Organic Pedagogical Electronic Network C–H bond Hydroxylation at Non-Heme Carboxylate-Bridged Diiron Centers Omar Villanueva, Cora MacBeth Emory University.
Mechanism of biopetrin-dependent enzymes
Valence Bond Theory: Getting New Geometries From Atomic Orbitals 2 p y = C sp 3 hybrid orbital 2 s orbital C 2 p z CH 4 : Tetrahedral 2 p x.
Reactants and Products  A chemical reaction is the process by which atoms or groups of atoms in substances are reorganized into different substances.
Chemical bonds. Bonding, the way atoms are attracted to each other to form molecules, determines nearly all of the chemical properties we see. Chemical.
Radical Reactions in Biological Systems
Unit 6: Chemical Bonding and Intermolecular Forces
Hammett plots in the world of enzymes
Organic Chemistry Second Edition Chapter 11 David Klein
Quantum Tunneling in Organic Chemistry
Fischer and Schrock Carbenes: A Brief Overview
Chapter 6 An Overview of Organic Reactions
Chem 250 Writing Assignment Lab 4 – Personal Care Product 10/10/14 one page summary of primary article due 10/24/14 annotated bibliography due 11/14/14.
Presented by Arianne Hunter Sharma Lab Literature Meetings
Chemical Reactions and Enzymes
CHM 4311.
Proline hydroxylases for use in biocatalysis
Introduction to Organic Chemistry
BIO201 SPRING 2018 Introduction to Biochemistry & Biotechnology
Enzymes.
Reactants and Products
Chapter Seven Molecular Geometry & Bonding Themes
Chapter 6: Chemistry in Biology
Links Keywords C2 Elements, Compounds and Mixtures C2.2 Bonding
Chapter 9.
Holtz, K. M. et al. J. Biol. Chem. 1999;274:
The Chemistry of Life.
Hydrogen atom transfer to a high-valent iron imido
CARBON CARBON EVERYWHERE!!
The Shapes of Molecules
Mechanism of Alkaline phosphatase
Covalent Bonding - Orbitals
Deciphering Reaction Mechanism with Intermediate Trapping
Zach Niemeyer, Justin Salvant University of Utah
Reactants are the starting substances, on the left side of the arrow.
Hybridization -often, molecular geometry is based on hybrid orbitals
Cytochrome P450 Oxidase Created by Joseph Aman
ENZYMES Unit 1 Biochemistry.
Oxidative damage cell death pathway model.
Volume 11, Issue 10, Pages (October 2004)
Covalent Bonding - Orbitals
Identify and Investigate the role of enzymes.
Hybridization - The Blending of Orbitals
Ch. 5 Atoms and Bonding Section 1: Atoms, Bonding, and the Periodic Table Objective – I will explain how the reactivity of elements are related to valence.
Bonding TheorIES SCH4U Grade 12 Chemistry.
Confirmation of the Improbable
Electron Dot Structure or Lewis Dot Structures
Presentation transcript:

Bio-Inspired Metal-Oxo Catalysts for C–H Bond Functionalization A.S. Borovik and Sarah Cook University of California-Irvine

Metal-Oxo Centers: Bonding Fundamentals Overview: Metal-oxo complexes are important species in the activation of strong C–H bonds in biological systems. The high reactivity of metal-oxo complexes results from the way their valence electrons are arranged, and this arrangement depends strongly on the geometry around the metal center. All metal-oxo species contain multiple bonds: one σ bond and at least one π bond that comes from donation of electrons on the oxygen atom into empty orbitals on the metal center. This donation causes the oxo ligand to be electrophilic. Geometric Configurations Octahedral Tetrahedral Trigonal Bipryamidal d-Orbital Arrangements σ anti-bonding π anti-bonding σ anti-bonding σ anti-bonding non-bonding Energy π anti-bonding non bonding non bonding π anti-bonding Bond order = 3 Bond order = 3 Bond order = 2 Bond order = (# electrons in bonding orbitals – # electrons in anti-bonding orbitals) / 2 Wiki Pages: https://en.wikipedia.org/wiki/Oxo_ligand Other References: Borovik, A.S. Chem. Soc. Rev. 2011, 40, 1870-1874. Gunay, A., K. H. Theopold Chem. Rev. 2010, 110, 1060-1081.

Metal-Oxo Centers in Biology: Cytochrome P450 The electrophilicity of the oxo ligand increases as the metal center loses electrons. As a result, the active oxidizing species in many biological enzymes often contain metal centers in the +4 or +5 oxidation state. This increased electrophilicity allows the metal-oxo species to react with thermodynamically strong C–H bonds via abstraction of an H-atom (H•) to generate a radical on the organic substrate. Proposed mechanism for C–H bond functionalization by cytochrome P450 enzymes. Structure of the iron-oxo complex in the active site of cytochrome P450. Selective hydroxylation of progesterone by cytochrome P450 17A1 during the biosynthesis of steroid hormones. R. R. Ortiz de Montellano, Chem. Rev. 2010, 110, 932–948; J. Rittle and M. T. Green, Science, 2010, 330, 933-937. Haider S, Patel J, Poojari C, Neidle S, J. Mol. Biol. 2010, 400, 1078-1098.

Metal-Oxo Centers in Biology: Non-Heme Enzymes Bicyclization reaction perfomed by isopenicillin-N synthase. Hydroxylation of proline by prolyl-4-hydroxylase in the post-translational modification of proteins. Baggaley, K. H., Brown A. G., Schofield C. J., Nat. Prod.Rep., 1997, 14, 309–333.; Baldwin, J. E., Bradley, M. Chem. Rev. 1990, 90, 1079-1088.; Gorres, K. L., Raines, R. T., Crit. Rev. Biochem. Mol. Biol. 2010, 45, 106-124.

Metal-Oxo Centers in Synthetic Chemistry The high reactivity of the metal-oxo species in biological enzymes with strong C–H bonds provides motivation for synthetic inorganic chemists to develop systems that allow similar metal-oxo complexes to be generated σ* Energy π* nb [FeIV(O)(N4Py)]2+ σ* nb Energy C–H bond activation reactions performed by the Fe(IV)–oxo complex [FeIV(O)(N4Py)]2+. π* [MnVH3buea(O)]– Kaizer, J. et al. J. Am. Chem. Soc. 2004, 126, 472-473. Taguchi, T. et al. J. Am. Chem. Soc. 2012, 134, 1996-1999.

Problems Determine the bond order for an octahedral metal-oxo complex whose d-orbital arrangement is shown below and that contains: 0 d-electrons 4 d-electrons 6 d-electrons If all metal-oxo compounds must contain multiple bonds (have a bond order of 2 or more), could a metal- oxo complex be prepared for the above electron counts in octahedral symmetry? σ anti-bonding Energy π anti-bonding non bonding

Problems 2. Draw an arrow-pushing mechanism for how the iron(IV)-oxo compound in the enzyme ten-eleven translocation dioxygenase reacts with 5-methylcytosine to form 5-hydroxymethylcytosine during the repair of damaged DNA. Hashimoto, H. et al, Nature 2014, 506, 391-395.

Metal-Oxo Centers in Biology: α-Ketoglutarate dependent dioxygenases The electrophilicity of the oxo ligand increases as the metal center loses electrons. As a result, the active oxidizing species in many biological enzymes often contain metal centers in the +4 or +5 oxidation state. This allows the metal-oxo species to react with strong C–H bonds via abstraction of an H atom (H•) to generate a radical on the organic substrate. Reaction of the Fe(IV)–oxo species in taurine dioxygenase with the substrate taurine. 5-methylcytosine is hydroxylated by ten-eleven translocation dioxygenase in a step of the repair of damaged DNA. Structure of the iron complex in the active site of taurine dioxygenase before formation of the reactive Fe(IV)–oxo species. Biochemistry 2003, 42, 7497-7508. Hashimoto, H. et. al, Nature 2014, 506, 391-395.

Contributed by: A.S. Borovik and Sarah Cook University of California-Irvine, 2014