Accelerations and the evolution of acceleration

Slides:



Advertisements
Similar presentations
DEB applications from eco- toxicity to fisheries and beyond Bas Kooijman Dept theoretical biology VU University Amsterdam
Advertisements

The energetics of maturation Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Amsterdam 2012/04/23.
 Dynamic Energy Budget Theory Tânia Sousa with contributions from :Bas Kooijman.
Laure Pecquerie Laboratoire des Sciences de l’Environnement Marin UMR LEMAR, IRD 21 st -22 nd April 2015, DEB Course 2015, Marseille.
Scaling relationships based on partition coefficients & body size have similarities & interactions Bas Kooijman Dept theoretical biology Vrije Universiteit.
Mechanistic modeling of zebrafish metabolism in relationship to food level and the presence of a toxicant (uranium) S. Augustine B.Gagnaire C. Adam-Guillermin.
Dynamic Energy Budget (DEB) theory by Elke, Svenja and Ben.
Energetics & Stoichiometry of plankton production Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
Tjalling Jager Dept. Theoretical Biology How to simplify biology to interpret effects of stressors.
Lecture 4 Covariation of parameter values. Scales of life 8a Life span 10 log a Volume 10 log m 3 earth whale bacterium water molecule life on earth whale.
Dynamische Energie Budget theorie Bas Kooijman Afd Theoretische Biologie Vrije Universiteit Amsterdam
DEB theory as framework for quantifying effects of noise on cetaceans Bas Kooijman Dept Theoretical Biology Washington, 2004/03/05.
Covariation & estimation of pars intro to practical part of DEB course 2011 Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
Estimation of DEB parameters Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
DEB-based body mass spectra
1-  maturity maintenance maturity offspring maturation reproduction Basic DEB scheme foodfaeces assimilation reserve feeding defecation structure somatic.
Modelkey: VUA-TB, WP Effect-3 Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
Application of DEB theory to a particular organism in (hopefully somewhat) practical terms Laure Pecquerie University of California Santa Barbara.
Lecture 3 Implications & extensions. Mass & energy balance The standard DEB model specifies fluxes of 4 organic compounds food, faeces, structure (growth),
Dynamic Energy Budget theory 1 Basic Concepts 2 Standard DEB model 3 Metabolism 4 Univariate DEB models 5 Multivariate DEB models 6 Effects of compounds.
Standard DEB model summary of tele-part of DEB course 2011 Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
Lecture 2 Standard DEB model. 1-  maturity maintenance maturity offspring maturation reproduction Standard DEB model foodfaeces assimilation reserve.
DEB theory, an introduction Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
DEB theory, an introduction Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
Kingdom Animalia What are animals? Animals eat to live: ‘ingestively’ heterotrophic Multicellular lack a cell wall.
From developmental energetics to effects of toxicants: a story born of zebrafish and uranium S. Augustine B.Gagnaire C. Adam-Guillermin S. A. L. M. Kooijman.
Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam What the egg can tell.
The Animal Kingdom Notes - pg. 129 EQ: What are the major functions of animals?
Intro to Animal Diversity
Population A population consists of all the members of a particular species that live within an ecosystem and can potentially interbreed.
Biodiversity of Fishes Growth Rainer Froese
Metabolic dynamics acceleration during the life cycle of an individual Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam
DEB theory - past and future MPDE 2013 Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Osnabrück,
Mass aspects & scaling Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Melbourne 2012/08/06 Contents.
Dina Lika Dept of Biology TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: AAA The covariation method of estimation Add_my_pet.
Biodiversity of Fishes: Life-History Allometries and Invariants Rainer Froese
 Dynamic Energy Budget Theory - I Tânia Sousa with contributions from :Bas Kooijman.
Animal Strategies I. Body Organization A. Complexity From Cells to Tissues to Organs to Systems.
 Dynamic Energy Budget Theory - I Tânia Sousa with contributions from :Bas Kooijman.
Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Add_my_pet a data and.
Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Estimating DEB parameters.
Dina Lika Dept of Biology TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: AAA Covariation of parameter values UNIVERSITY.
 Dynamic Energy Budget Theory Tânia Sousa with contributions from : Gonçalo Marques and Bas Kooijman.
Dynamic energy budgets in individual based population models
Characteristics of living things made of one or more cells
Biodiversity in the context of DEB theory
Kingdom Animalia.
Dynamic Energy Budget Theory
Olivier Maury, Olivier Aumont, Jean-Christophe Poggiale
Biological Principles
Theoretical Ecology course 2012 DEB theory
The Porifera and Cnidaria
Population Dynamics The study of population characteristics and how they change over time Although several species may share a habitat they each have.
Population Biology Chapter 4.
Biodiversity of Fishes Growth
From embryo to senescence with DEB theory for metab org
Scope for quantitative bioeconomics
Biodiversity of Fishes: Life-History Allometries and Invariants
Archaea Domain belonging to archaebacteria. Prokaryotic organisms
The scaling of metabolism in the perspective of DEB theory
Animal Strategies I. Body Organization A. Complexity
Biodiversity in the context of DEB theory
Models in stress research
Section 1: How Populations Change
Biodiversity, Species Interactions, and Population Control
Population Ecology.
16-2 Evolution as Genetic Change
What did we learn from the Add_my_Pet data base?
Accelerations and the evolution of acceleration
Characteristics of living things made of one or more cells
Presentation transcript:

Accelerations and the evolution of acceleration This lectures assumed that chapters 1-4 of Kooy2010 are known Bas.Kooijman@vu.nl Tromsø, 2017/05/21-30 deb.akvaplan.com/debschool.html

Contents What is acceleration? 5 types of acceleration Examples 3 items to discuss

Standard DEB model: growth Rhizoprionodon acutus milk shark Since acceleration means a deviations from standard DEB predictions, it makes sense to have a look at them first (this and next sheet) Change in length at birth is small than the initial one: Scaled reserve density e is infinite initially but between 1 and 0 after birth

Standard DEB model: respiration Crocodylus johnstoni, Data: Whitehead 1987 embryo yolk O2 consumption, ml/h weight, g Respiration is a weighted sum of squared and cubed length. time, d time, d (Post) embryonic respiration = a L2 + b L3

Metabolic acceleration Def: long-term increase of respiration relative to standard DEB expectation Types of acceleration R: maturation X: food (diet) A: assimilation M: morph T: temperature Short-term increase in respiration (no metabolic acceleration) heat increment of feeding boosts of activity migration pregnancy/ lactation Different types of acceleration of metabolism are presently recognised. This was possibly because the standard DEB model quantifies the typical trajectory of respiration. Reproduction hardly contributes to respiration directly, only indirectly

Type R acceleration Change in allocation to boost maturation Increase in respiration Decrease in growth Hit maturity threshold earlier at smaller size This type of acceleration of metabolism does not directly involve an increase in assimilation, the 4 other types do. Mueller et al 2012, Comp. Biochem. Physiol. A 163: 103-110

Type R acceleration acceleration no yes development indirect direct Pseudophryne bibronii Crinia georgiana The DEB definition of direct development: birth coincides with metamorphosis: tadpoles don’t assimilate. Two species of myobatrachid frogs don’t accelerate and keep  constant. Two species of myobatrachid frogs accelerate development by lowing  between hatch and birth, resetting  after metamorphosis. This change increases maturation and respiration and decreases growth. The direct developers show that  is not changed systematically between hatch and birth among myobatrachid frogs. direct Geocrinia vitellina Crinia nimbus

Type R acceleration 12 °C Crinia georgiana Pseudophryne bibronii hatch Mueller et al 2012, Comp. Physiol. Biochem. A, 163:103-110 Crinia georgiana max dry weight 500 mg hatch birth hatch birth metam metam 12 °C Pseudophryne bibronii age, d These two myobatrachid frogs are very similar in many respects, but the tadpoles of P. bibronii live in permament pools, while that of C. georgiana in temporary ones that dry up, soon after their metamorphosis. The latter accelerate development by lowering  temporarily, which also reduces growth. In this way it can leave the pond at the age of 110 days, while P. bibronii needs 200 d. Hatch coincides with birth for P. bibronii. C. georgiana is 4 mg at metamorphosis, P. bibrionii 35 mg dry, while the maximum weights are 500 and 200 mg, respectively. Both frogs have a (constant) somatic maintenance rate of some 400 J/d.cm3. The graphs in the middle just enlarge the graph on the right till birth. The step-up in respiration at birth is due to the onset of assimilation. Mueller C., Augustine, S., Kearney, M., Seymour, R. and Kooijman, S.A.L.M. 2011 Tradeoffs between maturation and growth during accelerated development in frogs Comp. Physiol. Biochem. A, 163:103-110 Data: Casey Mueller Model fit: Starrlight Augustine max dry weight 200 mg hatch birth hatch birth metam metam

Type X acceleration Def: increase of food intake during ontogeny, but no change in potential food intake Known examples concern change in food type This is the first of 4 types of increase in assimilation. Type X does not increase assimilation capacity, only actual assimilation

Type X acceleration Caenorhabditis elegans Perca fluviatilis C. elegans initially feeds on organic compounds; When its mouth is big enough, it feeds on bacteria When perch are big enough, they can shift to piscivory, which increases their assimilation Caenorhabditis elegans Byerly et al 1976 Developmental Biol. 51: 23-33. Perca fluviatilis Persson et al 2004 Ecol. Mon. 74: 135–157 organic compounds → bacteria zooplankton → fish

Type A acceleration Def: increase of potential food intake during ontogeny, but no change in mobilisation Known examples concern sex dimorphy Increase in reserve capacity This type of increase in metabolism increases assimilation capacity, so if enough food is available also actual assimilation and food intake. The effect is that maximum reserve density is increased, since energy conductance, which controls reserve mobilisation is not increased.

Type A acceleration Mirounga leonina Doryteuthis pealei southern elephant seal Doryteuthis pealei longfin inshore squid Male squid increase assimilation at birth, male elephant seals at puberty. Squid sport not only type A acceleration, but also (a bit) type M acceleration. This is not visible in the growth curve, but in the incubation times: embryos develop slower than juveniles and adults. Details can be found in the add_my_pet collection.

Type M acceleration Def: increase of potential food intake during ontogeny, combined with increase in potential mobilisation Increase of specific assimilation {pAm} and energy conductance v with length from birth to metamorphosis No change in reserve capacity One-parameter extension of standard DEB model: maturity level at metamorphosis Applies to all species with morphological metamorphosis, but also to some taxa without Type M acceleration is the most common type. About

Type M acceleration metam birth scaled length scaled time Gompertz The Gompertz curve has three parameters; after scaling of time and length, only scaled length at birth remains as parameter. The expo-von Bertalanffy curve has 4 parameters; after scaling, the scaled growth rate at metamorphosis is the forth parameter. Acceleration is quantified as the ratio of the lengths at metamorphosis and birth. The scaled growth rate at metamorphosis of the expo-von Bertalanffy curve is larger than that of the Gompertz one. scaled time Gompertz expo-von Bertalanffy

Type M acceleration scaled functional response f 1 scaled length 0.8 0.6 scaled time

Ecdysozoa Platyzoa Lophotrochozoa Spiralia Protostomia Bilateria Ctenophora Cnidaria Tunicata Leptocardii Echinodermata Mixini Cephalaspidorphi Chondrichthyes Actinopterygii Amphibia Reptilia Aves Mammalia Chaetognatha Rotifera Gastrotricha Platyhelminthes Annelida Mollusca Tardigrada Nematoda Crustacea Arachnida Enthognatha Insecta 1 2 5 10 Sarcopterygii Deuterostomia Ecdysozoa Lophotrochozoa Platyzoa Radiata Anthocephala Bryozoa Protostomia Spiralia Bilateria Porifera Metabolic acceleration in animal taxa, as quantified in the add_my_pet collection. The legends to the colors refer to the acceleration factor Lj / Lb, with which {pAm} and v at birth (start of acceleration) have to multiplied to arrive at the values at metamorphosis, (end of acceleration).

Type M acceleration max min Relative growth is independent of acceleration at birth, but accelerating species generally grow faster at puberty

Type T acceleration Def: increase of all rates due to ontogenetic increase in body temperature of endotherms Mostly confined to birds. Embryos are ectothermic Neonate heating capacity not sufficient to maintain target temperature

Type T acceleration t-T inferred from t-L curve t-T and t-L curves fitted simultaneously