Semantic Web for Health Care and Life Sciences Workshop In conjunction with WWW2008 April 22, 2008

W3C’s Semantic Web for Health Care and Life Science Interest Group

Workshop Co-Chairs Huajun Chen, Zhejiang University Kei Cheung, Yale University Michel Dumontier, Carleton University Eric Prud’hommeaux, W3C Alan Ruttenberg, Science Commons Susie Stephens, Eli Lilly Yimin Wang, University of Karlsruhe

Program Committee Dean Allemang, TopQuadrant Christopher Baker, A-STAR Olivier Bodenreider, NLM, NIH Keith Boyce, ImmuneTolerance Cory Brouwer, Pfizer Bill Bug, UCSD Helen Chen, AGFA William Cheung, Hong Kong Baptist University Tim Clark, Harvard University Sudeshna Das, Harvard University Don Doherty, Brainstage Lee Feigenbaum, Cambridge Semantics Andrew Gibson, Manchester University Carole Goble, Manchester University Yufeng Guo, China Academy of Traditional Chinese Medicine Amarnath Gupta, SDSC Volker Haarslev, Concordia University Peter Haase, University of Karlsruhe William Hayes, BiogenIdec Yusheng He, Peking University Ivan Herman, W3C Vipul Kashyap, Partners Healthcare Marijke Keet, Free University of Bolen-Bolzano Phil Lord, Newcastle University M. Scott Marshall, University of Amsterdam Robin McEntire, GSK Parsa Mirhaji, University of Texas Mark Musen, Stanford University Fabian Neuhaus, NIST Eric Neumann, Clinical Semantics Chimezie Ogbuji, Cleveland Clinic Elgar Pichler, AZ Matthew Pocock, Newcastle University Daniel Rubin, Stanford University Matthias Samwald, DERI Galway Susanna Sansone, EBI Michael Schroeder, Dresden University Nigam Shah, Stanford University Amit Sheth, Wright State University Robert Stevens, Manchester University Rudi Studer, Karlsruhe University Adam West, Eli Lilly Katy Wostencroft, Machester University Xuezhong Zhou

Agenda Time Topic Presenter 08.30 – 08.45 Welcome Susie Stephens 08.45 – 09.35 Scaling the Walls of Discovery: Using Semantic IMetadata for Integrative Problem Solving Greg Tucker-Kellogg 09.35 – 10.00 Modeling the Pharmacogenomics of Depression Iwith OWL 1.1 Michel Dumontier, Muhammed Faizan, IJoseph Obeng, Natalia Villanueva- IRosales 10.00 – 10.30 Break 10.30 – 10.55 Web Ontology Engineering and Applications: A ICase Study in Chinese Medicine Yuxin Mao, Zhaohui Wu 10.55 – 11.20 Capturing and Modeling Neuro-radiological IKnowledge on a Community Basis, the Head IInjury Scenario Alexander Garcia, Zhuo Zhang, IMenaka Rajapakse, Christopher IBaker, Suisheng Teng 11.20 – 11.40 A Scale-Out RDF Molecule Store for Distributed IProcessing of Biomedical Data Andrew Newman, Jane Hunter, Yuan- IFang Li, Chris Bouton, Melissa Davis 11.40 – 12.00 Semantic Graph Mining for Biomedical Data Tony Yu, Huajun Chen 12.00 – 1.30 Lunch

Agenda Time Topic Presenter 1.30 – 2.20 BioMoby and CardioSHARE: Attempting to Merge Ithe Semantic Web and Web Services Worlds Mark Wilkinson 2.20 – 2.40 Entrez Neuron: an OWL/RDFa-based Web IApplication for Information Exploration and IIntegration in Neuroscience Matthias Samwald, Ernest Lim, Peter IMasiar, Luis Marenco, Huajun Chen, IThomas Morse, Gordon Shepherd, IPerry Miller, Kei Cheung 2.40 – 3.00 Linked Data in a Scientific Collaboration IFramework Dudeshna Das, Thomas Green, Louis IWeitzaman, Alister Lewis-Bowen, Tim IClark 3.00 – 3.30 Break 3.30 – 3.50 Finding Experts for clinical Trial Submissions Matthias Löbe Roland Mücke, IChristian Eder 3.50 – 4.50 Panel: Integrating Semantic Web Communities in IHealth care and Life Sciences Panelists: Christopher Baker, Xue IQiao Hou, Jeff Pan, Greg Tucker- IKellogg, Mark Wilkinson. Moderators: Huajun Chen, Eric IPrud’hommeaux 4.50 – 5.00 Wrap Up Michel Dumontier