ASU Saguaro 09/16/2016 Jung Hyun Kim.

Slides:



Advertisements
Similar presentations
UNIX System Programming Installing OpenSolaris. 2/86 Contents How to setup a virtual machine guest How to install OpenSolaris as a guest How to update.
Advertisements

Southgreen HPC system Concepts Cluster : compute farm i.e. a collection of compute servers that can be shared and accessed through a single “portal”
HPCC Mid-Morning Break Interactive High Performance Computing Dirk Colbry, Ph.D. Research Specialist Institute for Cyber Enabled Discovery.
WORK ON CLUSTER HYBRILIT E. Aleksandrov 1, D. Belyakov 1, M. Matveev 1, M. Vala 1,2 1 Joint Institute for nuclear research, LIT, Russia 2 Institute for.
Introduction to HPC resources for BCB 660 Nirav Merchant
ISG We build general capability Introduction to Olympus Shawn T. Brown, PhD ISG MISSION 2.0 Lead Director of Public Health Applications Pittsburgh Supercomputing.
MSc. Miriel Martín Mesa, DIC, UCLV. The idea Installing a High Performance Cluster in the UCLV, using professional servers with open source operating.
VIPBG LINUX CLUSTER By Helen Wang March 29th, 2013.
HPC at HCC Jun Wang Outline of Workshop1 Overview of HPC Computing Resources at HCC How to obtain an account at HCC How to login a Linux cluster at HCC.
1.First Go to
Lab System Environment
O.S.C.A.R. Cluster Installation. O.S.C.A.R O.S.C.A.R. Open Source Cluster Application Resource Latest Version: 2.2 ( March, 2003 )
QuikTrac 5.5, a validated Motorola Software Solution, allows you to take your Host ERP screens and extend them out to fixed or mobile devices including.
Training & Support for End Users of Cisco Unified Communications Agenda:  Flash Demo  VoIPT on the Phone  Modules / Pricing  Installation Process.
Creating and running an application.
Page 1 Printing & Terminal Services Lecture 8 Hassan Shuja 11/16/2004.
Using the Weizmann Cluster Nov Overview Weizmann Cluster Connection Basics Getting a Desktop View Working on cluster machines GPU For many more.
Tier 3 Status at Panjab V. Bhatnagar, S. Gautam India-CMS Meeting, July 20-21, 2007 BARC, Mumbai Centre of Advanced Study in Physics, Panjab University,
ISG We build general capability Introduction to Olympus Shawn T. Brown, PhD ISG MISSION 2.0 Lead Director of Public Health Applications Pittsburgh Supercomputing.
Linux Operations and Administration
© 2006 Cisco Systems, Inc. All rights reserved.Cisco PublicITE I Chapter 6 1 Router Initialization steps.
Remote & Collaborative Visualization. TACC Remote Visualization Systems Longhorn – Dell XD Visualization Cluster –256 nodes, each with 48 GB (or 144 GB)
Getting Started: XSEDE Comet Shahzeb Siddiqui - Software Systems Engineer Office: 222A Computer Building Institute of CyberScience May.
Parallel MATLAB jobs on Biowulf Dave Godlove, NIH February 17, 2016 While waiting for the class to begin, log onto Helix.
Modules, Compiling WRF, and Running on CHPC Clusters Adam Varble WRF Users Meeting 10/26/15.
Geant4 GRID production Sangwan Kim, Vu Trong Hieu, AD At KISTI.
Using ROSSMANN to Run GOSET Studies Omar Laldin ( using materials from Jonathan Crider, Harish Suryanarayana ) Feb. 3, 2014.
© D. J. Foreman, Structure of an O/S. © D. J. Foreman, Overview  Required functionality –Handle interrupts –Manage resources Processes.
Advanced Computing Facility Introduction
Linux & Joker – An Introduction
Norwalk LUG May Meeting
Interacting with the cluster ssh, sftp, & slurm batch scripts
Workstations & Thin Clients
Fundamental of Databases
Hands on training session for core skills
GRID COMPUTING.
Auburn University
Welcome to Indiana University Clusters
Programming Tools Most of the programming assignments will require using the C language. We will use a current version of the GCC C compiler. What’s GCC?
Assumptions What are the prerequisites? … The hands on portion of the workshop will be on the command-line. If you are not familiar with the command.
Welcome to Indiana University Clusters
Installing Galaxy on a cluster :
Getting Started with R.
Creating and running applications on the NGS
Basics on DB access Elke A. Rundensteiner.
Joker: Getting the most out of the slurm scheduler
Hodor HPC Cluster LON MNG HPN Head Node Comp Node Comp Node Comp Node
OSG Connect and Connect Client
MaterialsHub - A hub for computational materials science and tools.
Quicken Connection issues Number More info :
Short Read Sequencing Analysis Workshop
Quicken Problems with Application
Quicken File Password related Issues
Quicken 2018 Support Team
Quicken File Password related Issues
Quicken Runs Slowly in Multi-User Mode
Quicken capital one download error
How to Import Data to Newer Version of Quicken
How to Import Data to Newer Version of Quicken
Bruce Pullig Solution Architect
College of Engineering
CCR Advanced Seminar: Running CPLEX Computations on the ISE Cluster
Advanced Computing Facility Introduction
Initial job submission and monitoring efforts with JClarens
High Performance Computing in Bioinformatics
Hitachi Storage Service Manager
Quick Start Guide   Installation GM Pro 7.4 5/10/2019.
Programming Tools Most of the programming assignments will require using the C language. We will use a current version of the GCC C compiler. What’s GCC?
Short Read Sequencing Analysis Workshop
Maxwell Compute Cluster
Presentation transcript:

ASU Saguaro 09/16/2016 Jung Hyun Kim

Creating an account https://researchcomputing.asu.edu/

Creating an account

Connection via SSH (Interactive mode) Host name: saguaro.asu.edu User name: ASUAD account Port number: 22 [jkim294@saguaro2 ~]$ mybalance Your account has unlimited CPU hours

Connection via SSH (Interactive mode) 2. interactive -n 8 --mem 16000 -t 0-4 -p cluster n: # of cpu cores mem: RAM size (16000 -> 16GB) Alternative way: --mem-per-cpu=2000 t: the duration of a session to run (days-hours) p: partition serial: 24 hours partition (default) long: more than 24 hours partition cluster: cluster partition

Connection via SSH (Interactive mode) 3. Loading applications module load matlab/2015b module load gcc/4.9.3 module unload gcc/5.2.0 4. Run your program/script

Connection via SSH (Interactive mode) Check system info Cat /proc/cpuinfo

Connection via NoMachine GUI version Setup Download & install NoMachine Client from https://saguaro1.asu.edu/howto/logging_in_with_nx.php Download sauaro.nxs file from https://saguaro1.asu.edu/howto/logging_in_with_nx.php

Connection via NoMachine

Connection via NoMachine Terminal GUI

Running jobs and status check Saguaro Cluster Status https://saguaro1.asu.edu/smallstatus.php Running jobs https://saguaro1.asu.edu/jobs.php?jobtype=running&sortcolumn=Job%20ID&sortdir=asc Waiting jobs https://saguaro1.asu.edu/jobs.php?jobtype=pending

Problems on interactive & NoMachine modes Should not close the shell No notification when it is done Sbatch Script