Quantitative and molecular analysis of noroviruses RNA in blood from children hospitalized for acute gastroenteritis in Belém, Brazil  Tulio Machado Fumian,

Slides:



Advertisements
Similar presentations
Supplementary Fig. S1. 16S RNA Neighbor-joining (NJ) tree of Brevibacterium metallicus sp. nov. NM2E3 T (in bold) and related species of genus Brevibacterium.
Advertisements

Human respiratory syncytial virus genomic and antigenic variants isolated in two hospitals during one epidemic, in Santiago, Chile  Vivian Luchsinger,
Journal of Clinical Virology
Early diagnosis of dengue in travelers: Comparison of a novel real-time RT-PCR, NS1 antigen detection and serology  Eili Huhtamo, Essi Hasu, Nathalie.
Frequency and phylogeny of norovirus in diarrheic children in Istanbul, Turkey  A.A. Ozkul, Bekir S. Kocazeybek, Nuri Turan, Gábor Reuter, Kamil Bostan,
BK polyomavirus-associated hemorrhagic cystitis among pediatric allogeneic bone marrow transplant recipients: Treatment response and evidence for nosocomial.
A qualitative PCR minipool strategy to screen for virologic failure and antiretroviral drug resistance in South African patients on first-line antiretroviral.
Volume 86, Issue 3, Pages (September 2014)
Human parechovirus seroprevalence in Finland and the Netherlands
Can HPV vaccine have other health benefits more than cancer prevention
Noroviruses associated with outbreaks of acute gastroenteritis in the State of Rio Grande do Sul, Brazil, 2004–2011  Juliana da Silva Ribeiro de Andrade,
C.J. Kyle, C.C. Wilson  Forensic Science International 
Molecular characterization of dengue virus 1 from autochthonous dengue fever cases in Croatia  I.C. Kurolt, L. Betica-Radić, O. Daković-Rode, L. Franco,
Molecular surveillance of measles and rubella in the WHO European Region: new challenges in the elimination phase  S. Santibanez, J.M. Hübschen, M.C.
Accurate genotyping of hepatitis C virus through nucleotide sequencing and identification of new HCV subtypes in China population  Y.-Q. Tong, B. Liu,
Molecular epidemiology suggests Venezuela as the origin of the dengue outbreak in Madeira, Portugal in 2012–2013  L. Franco, I. Pagan, N. Serre Del Cor,
Genetic detection of Dobrava/Belgrade virus in a Czech patient with Haemorrhagic fever with renal syndrome  A. Papa, H. Zelená, D. Barnetová, L. Petroušová 
E. Descloux, C. La Fuentez, Y. Roca, X. De Lamballerie 
M.V. Assous, A. Wilamowski  Clinical Microbiology and Infection 
Volume 57, Issue 6, Pages (December 2012)
W. Li, L. Liu, X. Jiang, X. Guo, M. Garnier, D. Raoult, P. Parola 
Investigation of human parvovirus B19 occurrence and genetic variability in different leukaemia entities  A.C. da Costa, I. Bendit, A.C.S. de Oliveira,
Comparison of microscopy, real-time PCR and a rapid immunoassay for the detection of Giardia lamblia in human stool specimens  T. Schuurman, P. Lankamp,
Recurrent and persistent respiratory tract viral infections in patients with primary hypogammaglobulinemia  Leena Kainulainen, MD, Tytti Vuorinen, MD,
J. Lu, H. Zeng, H. Zheng, L. Yi, X. Guo, L. Liu, L. Sun, X. Tan, H
West Nile virus outbreak in Israel in 2015: phylogenetic and geographic characterization in humans and mosquitoes  Y. Lustig, Z. Kaufman, B. Mannasse,
Accurate genotyping of hepatitis C virus through nucleotide sequencing and identification of new HCV subtypes in China population  Y.-Q. Tong, B. Liu,
L. Dubourg  Clinical Microbiology and Infection 
Visual detection of IS6110 of Mycobacterium tuberculosis in sputum samples using a test based on colloidal gold and latex beads  P. Upadhyay, M. Hanif,
Clostridium innocuum is a significant vancomycin-resistant pathogen for extraintestinal clostridial infection  J.-H. Chia, Y. Feng, L.-H. Su, T.-L. Wu,
A. Papa, K. Dumaidi, F. Franzidou, A. Antoniadis 
Detection of causative agents of tick-borne rickettsioses in Western Siberia, Russia: identification of Rickettsia raoultii and Rickettsia sibirica DNA.
Male patient with acute hepatitis E in Genoa, Italy: figatelli (pork liver sausage) as probable source of the infection  A.R. Garbuglia, A.I. Alessandrini,
Next-generation sequencing technology in clinical virology
Hepatitis E virus as a newly identified cause of acute viral hepatitis during human immunodeficiency virus infection  P. Colson, C. Dhiver, R. Gérolami 
Multiple genotypes and subtypes of hepatitis B and C viruses in Belarus: similarities with Russia and western European influences  C.M. Olinger, N.V.
A novel phlebovirus in Albanian sandflies
Ehrlichia canis phylogenetic analysis of the Borgo (Corsica) strain
A. Papa, K. Xanthopoulou, S. Gewehr, S. Mourelatos 
Comparative phylogenetic analysis of sapoviruses based on complete RdRp and VP1 nucleotide sequences. Comparative phylogenetic analysis of sapoviruses.
The oral cavity as a natural reservoir for Streptococcus sinensis
Identification of a novel cosavirus species in faeces of children and its relationship with acute gastroenteritis in China  J.-M. Yu, Y.-Y. Ao, L.-L.
W. Ibrahim, N. Boukhadra, D. Nasri-Zoghlami, P. Berthelot, S. Omar, T
Hepatitis B virus in Buenos Aires, Argentina: genotypes, virological characteristics and clinical outcomes  S.C. Pezzano, C. Torres, H.A. Fainboim, M.B.
Development of a real-time PCR assay for the specific detection and identification of Streptococcus pseudopneumoniae using the recA gene  V. Sistek, M.
Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for species identification of Acinetobacter strains isolated.
Molecular characterization of dengue virus 1 from autochthonous dengue fever cases in Croatia  I.C. Kurolt, L. Betica-Radić, O. Daković-Rode, L. Franco,
Outbreak of hand, foot and mouth disease/herpangina associated with coxsackievirus A6 and A10 infections in 2010, France: a large citywide, prospective.
MW polyomavirus and STL polyomavirus present in tonsillar tissues from children with chronic tonsillar disease  J. Peng, K. Li, C. Zhang, Q. Jin  Clinical.
Detection of human coronavirus NL63, human metapneumovirus and respiratory syncytial virus in children with respiratory tract infections in south-west.
Bufavirus genotype 3 in Turkish children with severe diarrhoea
A 1-year study of the epidemiology of hepatitis A virus in Tunisia
N. Jazmati, M. Hellmich, B. Ličanin, G. Plum, A.J. Kaasch 
HBV subgenotype misclassification expands quasi-subgenotype A3
Emergence of Crimean–Congo haemorrhagic fever in Greece
S. De Grazia, G.M. Giammanco, C. Colomba, A. Cascio, S. Arista 
Human isolates of Aeromonas possess Shiga toxin genes (stx1 and stx2) highly similar to the most virulent gene variants of Escherichia coli  A. Alperi,
D. -L. Zhang, Y. Jin, D. -D. Li, W. -X. Cheng, Z. -Q. Xu, J. -M. Yu, M
H. Leblebicioglu, C. Eroglu  Clinical Microbiology and Infection 
Amplification and pyrosequencing of near-full-length hepatitis C virus for typing and monitoring antiviral resistant strains  P. Trémeaux, A. Caporossi,
N. Santos, G. S. Mendes, R. C. Silva, G. A. Pena, M. Rojas, A. R
Molecular epidemiology and genetic diversity of human astrovirus in South Korea from 2002 to 2007  A.Y. Jeong, H.S. Jeong, M.Y. Jo, S.Y. Jung, M.S. Lee,
Human infection with novel G3P[25] rotavirus strain in Taiwan
K. S. Ko, T. Kuwahara, L. Haehwa, Y. -J. Yoon, B. -J. Kim, K. -H
L. Zhang, D. Raoult, P.-E. Fournier 
T. A. Nguyen, L. P. Hoang, L. D. Pham, K. T. Hoang, S. Okitsu, M
Mixed infection with Beijing and non-Beijing strains in pulmonary tuberculosis in Taiwan: prevalence, risk factors, and dominant strain  J.-Y. Wang, H.-L.
Sandfly fever virus outbreak in Cyprus
Novel West Nile virus lineage 1a full genome sequences from human cases of infection in north-eastern Italy, 2011  L. Barzon  Clinical Microbiology and.
Volume 53, Issue 4, Pages (October 2010)
Presentation transcript:

Quantitative and molecular analysis of noroviruses RNA in blood from children hospitalized for acute gastroenteritis in Belém, Brazil  Tulio Machado Fumian, Maria Cleonice A. Justino, Joana D‘Arc Pereira Mascarenhas, Tammy K.A. Reymão, Erika Abreu, Luana Soares, Alexandre C. Linhares, Yvone Benchimol Gabbay  Journal of Clinical Virology  Volume 58, Issue 1, Pages 31-35 (September 2013) DOI: 10.1016/j.jcv.2013.06.043 Copyright © 2013 Elsevier B.V. Terms and Conditions

Fig. 1 Noroviruses (NoVs) GII viral load among the positive stool samples with and without NoVs RNA in blood (p=0.0472), and serum samples, represented by qRT-PCR cycle number at which the fluorescence meet the threshold in the amplification plot (Ct). Children with double infection of NoVs and group A rotavirus (n=6) are not shown. Journal of Clinical Virology 2013 58, 31-35DOI: (10.1016/j.jcv.2013.06.043) Copyright © 2013 Elsevier B.V. Terms and Conditions

Fig. 2 Phylogenetic dendrogram based on partial capsid nucleotide sequences of noroviruses (NoVs) GII strains detected from stool (n=14) and serum samples (n=2) of hospitalized children with acute gastroenteritis. NoV prototypes were obtained from GenBank, and genotypes and their respective accession numbers are indicated at the right. Fecal (F) and serum (S) samples are marked with a filled and an unfilled diamond, respectively. The scale bar at the bottom of the tree indicates distance. Bootstrap values (2000 replicates) are shown at the branch nodes and values lower than 60% are not shown. Journal of Clinical Virology 2013 58, 31-35DOI: (10.1016/j.jcv.2013.06.043) Copyright © 2013 Elsevier B.V. Terms and Conditions