MedDRA® Coding Basics MedDRA® is a registered trademark of the International Federation of Pharmaceutical Manufacturers and Associations (IFPMA)

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Presentation transcript:

MedDRA® Coding Basics MedDRA® is a registered trademark of the International Federation of Pharmaceutical Manufacturers and Associations (IFPMA)

Course Objectives/Overview Gain knowledge of MedDRA’s structure, scope, and characteristics Learn the reasons we “code” data Learn about the “MedDRA Term Selection: Points to Consider” document Learn some basic coding approaches, including some coding “pearls”

MedDRA Overview

Objectives for MedDRA Development Result of an ICH initiative (M1) To provide: An international multi-lingual terminology Standardized communication between industry and regulators Support of electronic submissions Application through all phases of the development cycle Core slide

Objectives for MedDRA Development (cont) To provide (cont): Classification for a wide range of clinical information Support for multiple medical product areas A terminology that saves time, resources, and money Core slide

MedDRA Definition MedDRA is a clinically-validated international medical terminology used by regulatory authorities and the regulated biopharmaceutical industry. The terminology is used through the entire regulatory process, from pre-marketing to post-marketing, and for data entry, retrieval, evaluation, and presentation. Core slide

Scope of MedDRA OUT IN Not a drug dictionary Frequency qualifiers Diseases Diagnoses Signs Symptoms Therapeutic indications Investigation names & qualitative results Medical & surgical procedures Medical, social, family history Medication errors Product quality, device issues Numerical values for results Patient demographic terms Core slide. Updated v13.0 based on discussions with trainers. JH. Changed wording for drug product terms and equipment, device, diagnostic product terms (outside circle). Added medication errors, product quality and device issues inside circle. Referred to “other terminologies” instead of listing them. Clinical trial study design terms Severity descriptors Terms from other terminologies Not an equipment, device, diagnostic product dictionary

MedDRA Structure System Organ Class (SOC) (26) High Level Group Term (HLGT) (335) High Level Term (HLT) (1,709) Preferred Term (PT) (18,786) Lowest Level Term (LLT) (68,258) Core slide. Updated v13.0 term numbers. JH.

MedDRA Term Level Definitions SOC - Highest level of the terminology, and distinguished by anatomical or physiological system, etiology, or purpose HLGT - Subordinate to SOC, superordinate descriptor for one or more HLTs HLT - Subordinate to HLGT, superordinate descriptor for one or more PTs PT - Represents a single medical concept LLT - Lowest level of the terminology, related to a single PT as a synonym, lexical variant, or quasi-synonym (Note: All PTs have an identical LLT) Core slide.

System Organ Classes Blood and lymphatic system disorders Cardiac disorders Congenital, familial and genetic disorders Ear and labyrinth disorders Endocrine disorders Eye disorders Gastrointestinal disorders General disorders and administration site conditions Hepatobiliary disorders Immune system disorders Infections and infestations Injury, poisoning and procedural complications Investigations Metabolism and nutrition disorders Musculoskeletal and connective tissue disorders Neoplasms benign, malignant and unspecified (incl cysts and polyps) Nervous system disorders Pregnancy, puerperium and perinatal conditions Psychiatric disorders Renal and urinary disorders Reproductive system and breast disorders Respiratory, thoracic and mediastinal disorders Skin and subcutaneous tissue disorders Social circumstances Surgical and medical procedures Vascular disorders Core slide. 10

High Level Group Term Subordinate only to SOCs and superordinate descriptor for one or more HLTs SOC Cardiac disorders Core slide. HLGT Coronary artery disorders HLGT Cardiac arrhythmias HLGT Cardiac valve disorders 11

High Level Term Subordinate to HLGTs and superordinate descriptor for the PTs linked to it SOC Cardiac disorders HLGT Cardiac arrhythmias Core slide. HLT Cardiac conduction disorders HLT Rate and rhythm disorders NEC HLT Supraventricular arrhythmias 12

Examples of PTs SOC = Cardiac disorders HLGT = Cardiac arrhythmias HLT = Rate and rhythm disorders NEC Core slide. PT Arrhythmia PT Bradycardia PT Tachyarrhythmia 13

Examples of LLTs SOC = Cardiac disorders HLGT = Cardiac arrhythmias HLT = Rate and rhythm disorders NEC Core slide. PT = Arrhythmia LLT Dysrhythmias LLT Arrhythmia NOS LLT Arrhythmia LLT (Non-current) Other specified cardiac dysrhythmias 14

Non-Current Terms Non-current terms are flagged at the LLT level within MedDRA Not recommended for continued use Retained within the terminology to preserve historical data for retrieval and analysis Terms that are vague, ambiguous, out-dated, truncated, or misspelled Terms derived from other terminologies that do not fit MedDRA rules Core slide.

MedDRA Codes Each MedDRA term assigned an 8-digit numeric code The code is non-expressive Codes can fulfill a data field in various electronic submission types (e.g., E2B) Initially assigned alphabetically by term starting with 10000001 New terms are assigned sequentially Supplemental terms are assigned codes Core slide.

A Multi-Axial Terminology Multi-axial = the representation of a medical concept in multiple SOCs Allows grouping by different classifications Allows retrieval and presentation via different data sets Purpose of Primary SOC Determines which SOC will represent a PT during cumulative data outputs Is used to support consistent data presentation for reporting to regulators Core slide. 17

A Multi-Axial Terminology (cont) A PT can be associated with one or more SOCs One of the associations is primary; all others are secondary A PT will have one and only one path to any particular SOC MedDRA can express multi-axiality at the PT, HLT, or HLGT level Core slide. 18

A Multi-Axial Terminology (cont) SOC = Respiratory, thoracic and mediastinal disorders SOC = Infections and infestations HLGT = Respiratory tract infections HLGT = Viral infectious disorders Core slide. HLT = Viral upper respiratory tract infections HLT = Influenza viral infections PT = Influenza 19

A Multi-Axial Terminology (cont) PTs in the following SOCs only appear in that particular SOC and not in others, i.e., they are not multi-axial Investigations Surgical and medical procedures Social circumstances Core slide.

Rules for Primary SOC Allocation PTs for diseases, signs and symptoms are assigned to prime manifestation site SOC Congenital and hereditary anomalies terms have SOC Congenital, familial and genetic disorders as Primary SOC Neoplasms terms have SOC Neoplasms benign, malignant and unspecified (incl cysts and polyps) as Primary SOC Exception: Cysts and polyps have prime manifestation site SOC as Primary SOC Infections and infestations terms have SOC Infections and infestations as Primary SOC Core slide. 21

Primary SOC Priority If a PT links to more than one of the exceptions, the following priority will be used to determine primary SOC: 1st: Congenital, familial and genetic disorders 2nd: Neoplasms benign, malignant and unspecified (incl cysts and polyps) 3rd: Infections and infestations Core slide.

Why Do We Code?

What Is “Coding”? Code 1 : a systematic statement of a body of law; especially one given statutory force 2 : a system of principles or rules <moral code> 3 a : a system of signals or symbols for communication b : a system of symbols (as letters or numbers) used to represent assigned and often secret meanings 4 : genetic code 5 : a set of instructions for a computer Core slide. 24

Why Do We Code? Retrieve Present Analyze Communicate Core slide. 25

Role of a Terminology Provides a TOOL to represent data/ concepts using “place-holder” terms Assists in retrieval, analysis, and comprehension of data Core slide. 26

What Does MedDRA Offer? Size and specificity (“granularity”) Hierarchy/grouping terms “Support” SOCs widen data collection/analysis options Up-to-date and medically rigorous User-responsive STANDARDIZATION Core slide. 27

“MedDRA Term Selection: Points to Consider” Document

“MedDRA Term Selection: Points to Consider” An ICH-endorsed guide for MedDRA users Developed to promote medically accurate and consistent use of MedDRA in exchange of data (ultimately, for “medically meaningful” retrieval and analysis) In some cases with more than one option for selecting terms, a “preferred option” is identified but this does not limit MedDRA users to using that option Core slide.

Term Selection PTC (cont) Developed by a working group of the ICH Steering Committee Regulators and industry representatives EU, Japan, USA Canadian observer, MSSO, JMO Current version available on MedDRA MSSO Web site (http://www.meddramsso.com/subscriber_library_ptc.asp) Core slide. Updated v13.0. JH. Updated the weblink.

General Principles Quality of source data Level of term selection Use of “Current”/”Non-current” Lowest Level Terms (LLTs) Choice of term Do not subtract or add information Quality Assurance Core slide.

Quality of Source Data Obtain clarification of data that are confusing, ambiguous, or unintelligible Can be optimized by careful design of data collection forms and proper training of relevant staff REMEMBER: No terminology (including MedDRA) will help in understanding data that is of poor quality; best to get good information at the beginning Core slide

Level of Term Selection Use of “Current”/”Non-current” LLTs Lowest level term(s) that “most accurately reflects the reporter’s words ” should be selected Example: “Abscess on face”  select “Facial abscess,” not simply “Abscess” Select current LLTs only Non-current terms for legacy conversion/ historical purposes Core slide.

Choice of Term Avoid company-specific “work-arounds” for MedDRA deficiencies. If concept not adequately represented in MedDRA, submit Change Request to MSSO. If no exact match in MedDRA, use medical judgment to match to an existing term that adequately represents the concept Core slide.

Do Not Subtract or Add Information Select terms for every ADR/AE reported, regardless of perceived relationship to drug If diagnosis reported with characteristic signs and symptoms, acceptable to select term only for diagnosis Do not make diagnosis if only signs/symptoms reported Example: “Abdominal pain” + “Increased serum amylase” + “Increased serum lipase”  inappropriate to select “Pancreatitis” Core slide.

Quality Assurance Human oversight of automated coding results Qualification of coder/review staff Errors in MedDRA should be addressed by submission of Change Requests to MSSO; no ad hoc structural alterations to MedDRA Core slide. 36

FDA-Defined Coding Errors Missed Concepts All medical concepts described after the product is taken should be coded Example: “The patient took drug X and developed alopecia, increased LFTs and pancreatitis”. Manufacturer only codes alopecia and increased LFTs (missed concept of pancreatitis) Example: “The patient took drug X and developed interstitial nephritis which later deteriorated into renal failure”. Manufacturer only codes interstitial nephritis (missed renal failure concept) Core slide. Acknowledgement: Dr. Toni Piazza-Hepp, Office of Surveillance and Epidemiology, CDER 37 37

FDA-Defined Coding Errors (cont) “Soft Coding” Selecting a term which is both less specific and less severe than another MedDRA term is “soft coding” Example: “Liver failure” coded as hepatotoxicity or increased LFTs Example: “Aplastic anemia” coded as unspecified anemia Example: “Stevens Johnson syndrome” coded as rash Core slide. Acknowledgement: Dr. Toni Piazza-Hepp, Office of Surveillance and Epidemiology, CDER 38 38

Conflicting/Ambiguous/Vague Information Conflicting information: Example: if “Hyperkalemia with a serum potassium of 1.6 mEq/L”  “Serum potassium abnormal” can be selected Ambiguous information: Example: “GU pain”  “Pain” can be selected (“GU” could be “genito-urinary” or “gastric ulcer”) Vague information: Example: “Patient experienced every listed adverse event”  “Unevaluable event” can be selected Core slide.

Body site vs. Event specificity If MedDRA term describes both site and event, that term should be selected Example: “Skin rash on face”  “Rash on face” can be selected If no MedDRA term describes both site and event, term for event should be selected (i.e., event takes “priority” over site). Example: “Skin rash on chest”  “Skin rash” can be selected Core slide.

Investigations Medical condition vs. laboratory result “Hypoglycemia”  “Hypoglycemia” can be selected “Decreased glucose”  “Glucose decreased” can be selected Unambiguous laboratory result Value reported is clearly out of reference range. Example: “Glucose 40 mg/dL”  “Glucose low” can be selected Ambiguous laboratory result “Glucose was 40” (note: no units)  “Glucose abnormal” can be selected Core slide.

Investigations (cont) If diagnosis/condition and diagnostic (test) result provided, appropriate to code only diagnosis/ condition Example: “Elevated potassium, K 7.0 mmol/L, and hyperkalemia”  “Hyperkalemia” can be selected Do not combine separate tests results into one single term Example: “Increased alkaline phosphatase, increased SGPT, increased SGOT and increased LDH”  “Alkaline phosphatase increased,” “SGPT increased,” “SGOT increased,” and “LDH increased” can be selected Core slide.

Points to Consider About “Points to Consider” A “living document,” intended to grow and change as MedDRA advances from version to version A “companion document” to MedDRA Recommended to be used as the basis for individual organizations’ post-MedDRA implementation coding conventions Core slide. 43

MSSO’s MedDRA Browsers MedDRA Desktop Browser Download from MSSO Web site View/search MedDRA and SMQs Export functionality MedDRA Web-Based Browser https://www.meddrabrowser.org/dsnavigator/ Requires specific user ID and password Access to all MedDRA versions in English and available EU languages (and Chinese, if subscribed) Core slide. New in v13.0. Suggest showing this slide before doing browser demonstration. 44

Browser Demonstration/ Approaches to Finding the Best LLT

Coding Example 1 Specificity The patient suffered from a hypersensitivity reaction to the drug.

Coding Example 2 Symptoms The patient states she has been experiencing headaches.

Coding Example 3 Investigations Lab results indicate the patient has increased SGOT and increased SGPT.

Coding Example 4 Drug product terms Patient with a history of codeine abuse was excluded from the study. Patient B was admitted to a drug rehabilitation facility for cocaine abuse.

Coding Example 5 Patient demographics A 45 year old female patient was diagnosed with breast cancer.

MedDRA Coding “Pearls” Be aware of MedDRA’s specificity Exploit MedDRA’s hierarchy – if an LLT is close to what you need, look at its “siblings” and “parent” Highly recommended to check where LLT lies in MedDRA (i.e., check the hierarchy above to be sure it represents the verbatim term accurately)

MedDRA Coding “Pearls” (cont) A “top-down” navigation may be useful at times Think like an autoencoder  if it’s not “renal” try “kidney”; if it’s not “skin”, try “cutaneous”, etc. Use available resources for difficult verbatim terms (web search, medical dictionaries, colleagues)

MedDRA Coding “Pearls” (cont) And most important of all… get more coding training!

Summary In this webinar, we: Reviewed the structure, scope, and characteristics of MedDRA Learned the reasons we “code” data and the role of a coding terminology Were introduced to the “MedDRA Term Selection: Points to Consider” document and some of its specific principles Learned basic approaches to coding, including some coding “pearls”

MSSO Contacts Mail Telephone Fax Products and Services MedDRA MSSO 3975 Virginia Mallory Drive Chantilly, VA, USA 20151 Telephone Toll-free Worldwide 877.258.8280 (AT&T) Fax 703.272.5635 Products and Services Core slide. 55

MSSO Contacts (cont) To Subscribe by Help desk E-mail Web site Phone mssosubscribe@ngc.com Web site www.meddramsso.com click on “Subscribe to MedDRA” Help desk Phone International AT&T Toll Free: 877.258.8280 Direct Dial (USA): 703.272.5849 mssohelp@ngc.com Core slide. 56

Questions?