National Biodiversity Information System

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Presentation transcript:

National Biodiversity Information System Brenda Daly South African National Biodiversity Institute

NBIS Data workflows Specify Custom FBIP queries IPT Consumer iSpot National data store 11 Museums FBIP queries IPT NBIS Access and Search Aid iSpot Consumer Spatial BGIS queries responses BRAHMS Custom National data store 75 Herbaria

concept - interoperable information structure Enrichment Taxonomic descriptions Plants Animals (incl invasives) Conservation information Red list assessment Risk Assessment Sustainable use Images Specimen Field Landscape Enrichment Ecosystem descriptions Terrestrial Freshwater Estuarine, Marine Conservation information Ecosystem threat status Ecological condition Ecosystem Protection level Images Landscape Composition Species Taxonomic Backbone = Checklist of spp (ind/int/inv) SPECIES Ecosystem classification (including hierarchy) ECOSYSTEM land-use, climate change, invasives PRESSURES GENETICS Spatial Specimens Relevé Observations Atlas Spatial Ecosystems maps Ecological condition Assessments/Plans Reference/Models Publications Peer reviewed Books, Grey Publications Peer reviewed Books, Grey Archive of research / experiments

Systems and Applications sanbi.org pza.sanbi.org amlibweb Search for information biodiversityadvisor.sanbi.org bgis.sanbi.org speciesstatus.sanbi.org species.sanbi.org redlist.sanbi.org newposa.sanbi.org BODATSA Search for data ipt.sanbi.org.za **ZODATSA bgis.sanbi.org metadata.sanbi.org *Living Collections ispotnature.org Contribute to research opus.sanbi.org nssl.sanbi.org eia.sanbi.org seis.sanbi.org.za transcribe.sanbi.org

What are we doing? Merging biodiversity sector needs (~13+2) to streamline the product offering and needs to project a uniform and integrated face to the end-users of biodiversity information; TOGAF 9 Enterprise Architecture. What are we doing?

Methodology

TOGAF is NOT a methodology for managing software development It has helped us identify what software to build or acquire; What need the software should satisfy; Outsourcing the work - what should go into the proposed build; How to monitor the development and implementation. What is TOGAF?

Business Benefits of EA Provides a common foundation and understanding of EA across SANBI and Data Partners. Provides an ability to better understand current organisational structures, systems and technologies, resulting in the ability to rationalise systems and technology and re-use where possible – resulting in reduced operating costs. Helps manage the “lifecycle” and evolution of EA, allowing SANBI to execute strategically, rather than tactically, based on a business vision and strategy. Business Benefits of EA

Phased Approach NBIS has been conceptualised in two phases: Phase 1: Scoping and design of the architecture Statement of Architecture Work System Requirements and Solution Specifications Phase 2: Implementation Phased Approach

Statement of Architecture Work (TOGAF) Statement of Architecture Work

Section 2 of NEMBA - SANBI’s purpose is to assist in achieving the objectives of the Biodiversity Act; Section 11 of NEMBA – Monitor and report on the status of biodiversity (indigenous, invasive and genetically modified organism). Coordinate and promote the taxonomy of South Africa's biodiversity. Manage, control and maintain all national botanical gardens; herbaria; museums and zoos. Provide biodiversity policy advice and access to biodiversity information; and support for climate change adaptation. Build the foundational biodiversity science. NEMBA Regulations – TOPS, CITES, Alien and Invasive National Priorities – NBSAP, NBF, NCCRP 2014-2019 Medium Term Strategic Framework (MTSF) National Biodiversity Strategy and Action Plan (NBSAP) National Biodiversity Framework (NBF) National Climate Change Response Policy (NCCRP) Business Drivers of EA

Enterprise Architecture Policy Business Architecture Principles: B01: Primacy of Principles B02: Maximise Benefit to the Enterprise B03: Info sys need to support SANBI’s mandate B04: Common Use Information Systems B05: Sharing of information B06: Service Orientation B07: Compliance with Law B08: Protection of Intellectual Property B09: Architecture Compliance B10: Living Architecture Application Architectural Principles: A01: Technology Independence A02: Application Documentation A03: Business Alignment A04: Software Configuration and Change Management A05: Systems Development Lifecycle (SDLC) A06: Ensure a consistent user experience across multiple channels (integration) Data Architectural Principles: D01: Data Management D02: Data is Accessible D03: Controlled Vocabulary and Data Definitions D04: Data Security D05: Sensitive Species Technology Architectural Principles: T01: Requirements-Based Change T02: Interoperability T03: Centrally managed information assets T04: Control Technical Diversity Set of Principles

Statement of Principle Name B01: Primacy of Principles Statement These principles of information management apply to all organisations (including data partners) within the enterprise. Rationale The only way we can provide a consistent and measurable level of quality information to decision-makers is if all SANBI programmes / projects and Data Partners abide by the principles. Implications Without this principle, exclusions, favouritism, and inconsistency would rapidly undermine the management of information. Information management initiatives will not begin until they are examined for compliance with the principles. A conflict with a principle will be resolved by changing the framework of the initiative. Statement of Principle

System Requirements and Solution Specifications (TOGAF) System Requirements and Solution Specifications

7 Focus areas Function of the product How it will help Stakeholder analysis Roles and responsibilities Policy analysis Baseline and target vision Budget and time-scale for product development if there is no solution 7 Focus areas

Function of the Product Provides the specific purpose and familiarises the reader with the application. Case study: Citizen Science Platform © National Environmental Education Foundation Function of the Product

Contribution of the Product Evaluates the products contribution to the SANBI capability portfolio. Case study: Institutional repository (Opus) Long-term preservation of SANBI’s intellectual outputs; Management (self-archiving), documentation (metadata) and dissemination of scholarly articles; Access to all works produced by SANBI; Facilitates Annual Performance Plan (APP) reporting Contribution of the Product

Stakeholder Analysis Who the product will be used by? Case study: Invasive species Stakeholder Need to know Government (setting national targets) Checklist of invasive species with the correct and valid scientific names. Ecosystems affected and how? Which species have the greatest impact? What invasive alien species control or eradication programmes are underway? How effective have these been? How could their effectiveness be improved? What lessons have been learned from their implementation? What additional species should be controlled or eradicated? Scientists Biogeography (the branch of biology that deals with the geographical distribution of living organisms) to answer fundamental questions about why certain species occur where they do, and why certain types of species occur together. Seek solutions to problems that arise when alien species become invasive. Citizen scientists The identities of invasive species and characteristics of environmental change Stakeholder Analysis

Roles and responsibilities Those responsible, accountable, consulted and informed Case study: BODATSA Job title Responsibility South African National Plant Checklist Co-ordinator Maintain the plant checklist with changes identified in the literature being incorporated into the checklist within a reasonable amount of time on an ongoing basis. Alien Checklist Co-ordinator In collaboration with the Centre for Invasion Biology maintain the checklist of alien plants of South Africa. Herbarium curators Manage plant distribution and taxonomic data at partner herbaria e-Flora Coordinator Populating BODATSA with relevant floristic information, such as morphological descriptions, distribution and ecological information, images, common names, uses and references. Data Content Manager Management, maintenance and co-ordination of the activities and processes related to the content of the SANBI’s plant collections database (BODATSA). Researchers Conducting original research that utilise existing collections Taxonomists Taxonomic experts who use the system to classify species Biodiversity Information Management staff System maintenance and ensuring that the data is published online Roles and responsibilities

Biodiversity Planning Model Analysis of policy, legislation, strategies and action plans relate or affect the product. Case study: Sensitive Species System Supporting Policies Biodiversity Planning Model URL Digital Access to Sensitive Taxon Data Policy http://biodiversityadvisor.sanbi.org/wp- content/uploads/2012/09/SANBI- Biodiversity-Information-Policy-Series- Digital-Access-to-Sensitive-Taxon.pdf Policy Analysis

Baseline and target vision Case study: PlantZAfrica Baseline Vision Offering popular articles for gardeners and landscapers. Target Vision PlantZAfrica data is duplicating the data from BODATSA so allowance needs to be made for PlantZAfrica integration. This is in contravention of the ‘Centrally managed information assets’, the ‘Common Use Information Systems’ and the ‘Maximise Benefit to the Enterprise’ architectural principles. Benefits Reduce technology spend Ease of maintenance Future-proof Baseline and target vision

Budget and Time-scale for Product Case study: Species Red List Assessment System Comparison of existing systems based on: Business Requirements Technical System Requirements Security Support   Conservation Assessment Module (CAM) Rapid Risk Assessment Application (RRAPP) Species Information Service (SIS) TSP MS Access Database Developer BRAHMS (Oxford University) National Centre for Plant Conservation (CNC Flora) IUCN SANBI Budget and Time-scale for Product

Community’s use of data standards (transfer, sharing and citation); Participating in standard process (unique identifiers – GUIDs, URLs, LSIDs) Licencing of data (replication) and applications; Shared and centralised access to the data (feasibility study); Establish hosting centres for biodiversity data; Develop tools for data discovery Long-term sustainability Data Partners

Progress to-date

Thank you