Publishing data & software Iulia Georgescu

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Presentation transcript:

Publishing data & software Iulia Georgescu

Determination of the speed of light Data Story: 1676 Journal des sçavans Ole Rømer (1644–1710)

350 years of scientific publishing 1665 Philosophical Transactions of the Royal Society and Journal des sçavans (1665-1792) 2015 >14,000 ISI journals ~58 million papers in Web of Science

Jim Gray The Fourth Paradigm Empirical (describing natural phenomena) Theoretical (using models, generalizations) Computational (simulating complex phenomena) Data exploration (theory, experiment & simulation) How has science publishing changed?

Isaac Newton 1671 James Clerk Maxwell 1864 Watson & Crick 1953 Wilhelm Roentgen 1896

Changing paradigm The old type of narrative: data to support a hypothesis Data-intensive science: Large amounts of data Should be made accessible to others Exploratory use data interesting in itself

Filter and publish? or Publish and filter? Data Story Filter and publish? or Publish and filter?

A possible answer: data journals Scientific Data (NPG) Data in Brief, Genomics Data (Elsevier) Geoscience Data Journal (Wiley)

The concept of Data journals Data must be well described before others can use it and benefit from it Scientists who share data in a reusable manner deserve credit through citable publications Data quality matters

How does it work? Include methods and technical analyses supporting the quality of the data Publish alongside a journal article Describe standalone datasets that don’t fit in other publications Release data used in previous research articles

How to write a data descriptor? Title Abstract Background & Summary Methods Technical Validation Data Records Usage Notes Figures & Tables References Data Citations Research article Title Abstract Introduction Main results Discussion Outlook Methods Figures & Tables References Supplementary Info No tests of new scientific hypotheses

How about data & software reviews? Coming up in Nature Reviews Physics in 2019

The future Publishing data & software will become more widespread Scientists and funders will come to appreciate these new articles on the same footing as primary research Challenges: educating scientists to write and peer-review these new articles and establish guidelines for good scientific practice