Environmental stress exacerbate the emergence of Multidrug

Slides:



Advertisements
Similar presentations
The Critical Challenge of Antibiotic Resistance: Are Wastewater Treatment Plants a Concern? Kourtney Brown 1, Stefan Walston 2, Channah Rock 2, & Jean.
Advertisements

2011 National Environmental Health Association Meeting Crispin Pierce, Sasha Showsh, and Eli Gottfried (faculty) Tola Ekunsanmi, Michael Checkai, Jay Nielsen,
Antimicrobial resistance (AMR) profiling in Escherichia coli from farmed and wild animals in the Mekong delta of Vietnam Nguyen Thi Nhung Oxford University.
Prevalence of ESBL and MBL antibiotic resistance genes in Klebsiella pneumoniae in Pretoria Academic Hospital Maningi NE, Ehlers MM, Hoosen AA, Makgothlo.
Zachary Bendiks. Jonathan Eisen  UC Davis Genome Center  Lab focus: “Our work focuses on genomic basis for the origin of novelty in microorganisms (how.
Ceftazidime resistance in a Salmonella enterica serotype Bareilly in Ireland N.DeLappe, D Morris, C.O’Hare, E.Costello, G.Corbett-Feeney and M.Cormican.
Isolating and Purifying Novel Antibiotics from Soil Bacteria Heather Fisher, Department of Biological Sciences, York College of Pennsylvania Introduction.
Antimicrobial resistance surveillance in Ireland Results of invasive Escherichia coli infection (blood/CSF) surveillance, 2009 **** Data as of 01/12/2010.
The Antibiotic Sensitivity Test Presented by Marian Mikhail Undergraduate student Biology Major Health and Science Concentration Health and Science Concentration.
Vesicle-Mediated Transfer of Antibiotic Resistance Between Klebsiella pneumoniae and Serratia marcescens Ondraya Espenshade Department of Biological Sciences,
Rapid detection of pathogenic bacteria in surface water by bacteria universal primer The increase of urban population often results in higher percentage.
Mic 224 Lab 6 Streak Plate Technique and Antibiotic Sensitivity.
Antimicrobial Resistance patterns among nosocomial gram negative bacilli by E-test and disc diffusion methods in Sina and Imam Hospital.
Standing Up Against Antibiotic Resistance With Synergistic Approach
Chapter 18 Section 01. Core Case Study: The Global HIV/AIDS Epidemic According to the World Health Organization (WHO), in 2005 about 42 million people.
Supplemental testing methods
Antimicrobial resistance surveillance in Ireland Results of invasive Klebsiella pneumoniae infection (blood/CSF) surveillance, 2009 **** Data as of 01/12/2010.
The Evaluation Of Novel Βeta-Lactam Antibiotics On Clinical Bacterial Isolates. Melvin Grimes 1, Adrienne Murphy 1,Jason Carr 2,and Debra Jackson 1, 1.
REVISED ABSTRACT Background: Omadacycline (OMC) is the first of a new class of tetracyclines, the aminomethylcyclines, and is being developed as a once-daily.
Bacterial Infection in the Dungeness Crab, Cancer magister Sarah Dunn, Hannah Pramuk, David Scholnick and Györgyi Nyerges Pacific University, Department.
Materials & Methods Objective Extraintestinal pathogenic Escherichia coli in healthy broiler chicken in Italy: a combination of virulence with antibiotic.
Antimicrobial susceptibility patterns of Polish invasive isolates of Neisseria meningitidis in the years Marcin Kadłubowski 1, Anna Skoczyńska.
Biological Hazards Chapter 20 Section 2. Global Warming Affects  Wide Spread of global warming allows mosquitoes to flourish in regions of the world.
C-158 Genetic and Biochemical Characterisation of OXA-405, a New Extended Spectrum Class D -Lactamase from Serratia marcescens L. Dortet1,2, S. Oueslati1,
Tapasyapreeti Mukhopadhyay, Vrushali Patwardhan, Sarman Singh
Section 3: Bacteria, Viruses, and Humans
Characterization of B-lactam resistance mechanisms among UTI isolates collected from women attending primary care across Europe- RGNOSIS P th ECCMID.
Searching for antibiotic producing soil isolates
HEALTH PROMOTION.
Current Status of Antimicrobial Resistance
N°XXXX Rapid detection of extended-spectrum BETA-lactamase producing Enterobacteriaceae from urine using the ESBL NDP test Patrice Nordmann, Laurent Poirel,
Serotypes, genotypes and antimicrobial resistance patterns of human diarrhoeagenic Escherichia coli isolates circulating in southeastern China  Y. Chen,
Epidemiological and bacteriological findings
Afaq R. Afridi, Tanveer Ahmad, Arshad Hussain and Abdul Samad.
High Fecal Carriage of Antibiotic Resistant Enterobacteriaceae Strains among Food Handlers in the West Coast Region of The Gambia Bakary Sanneh1*, Olliemattou.
Introduction and Purpose References and Acknowledgements
Environmental Effects on Human Health
Antimicrobial Susceptibility Testing (AST)
Frequencies of detected ARGs
carbapenemase-positive Enterobacteriaceae
Antibiotic Resistance
JM Tyrrell1, M. Woodward2, RA. Howe3, TR. Walsh1
Reasons for non use of ACTs
Emergence of Klebsiella pneumoniae with an AmpC(DHA-1) and blaSHV-11 in a Belgian hospital. Timothy Vanwynsberghe1, Katia Verhamme2, Marijke Raymaekers3,
Introduction to Lab Ex. 14: Antibiotic Sensitivity
Percentage of Antibiotic Producers per Isolates Tested
Clinico-Pathological Conference (CPC) Meet
Today: Biotechnology Exam #2 Th 10/23 in class.
Antibiotics sensitivity of microorganism causing nosocomial infections
D-739/181 50th ICAAC Sept , 2010 Boston
Prevalence of CTX-M-14 type in Welsh Hospitals
RESULTS AND DISCUSSION
Antimicrobial Resistance: from Global to Local
Antibiotic Sensitivity
Antibiogram By:Dr. S. S. Khoramrooz In the name of God
Chapter 20: The Environment and Human Health
Impact of changes in CLSI and EUCAST breakpoints for susceptibility in bloodstream infections due to extended-spectrum β-lactamase-producing Escherichia.
ANTIBIOTIC RESISTANCE
Rapid detection of enterobacteriaceae producing extended spectrum beta-lactamases directly from positive blood cultures by matrix-assisted laser desorption.
Evaluation of a diagnostic flow chart for detection and confirmation of extended spectrum β-lactamases (ESBL) in Enterobacteriaceae  S. Polsfuss, G.V.
Phenotypic detection of extended-spectrum β-lactamase production in Enterobacteriaceae: review and bench guide  L. Drieux, F. Brossier, W. Sougakoff,
TRAINING PRESENTATION
Development and clinical validation of a molecular diagnostic assay to detect CTX-M- type β-lactamases in Enterobacteriaceae  J.D.D. Pitout, N. Hamilton,
Antibiotic susceptibility testing
I. Faria-Ramos, M. J. Espinar, R. Rocha, J. Santos-Antunes, A. G
Emergence of extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae during the years 2000 and 2004 in Helsinki, Finland  S.D.
Colonization of residents and staff of a long-term-care facility and adjacent acute-care hospital geriatric unit by multiresistant bacteria  A. March,
Transferable plasmid mediating resistance to multiple antimicrobial agents in Klebsiella pneumoniae isolates in Greece  I. Galani, E. Xirouchaki, K. Kanellakopoulou,
Multi-centre evaluation of a phenotypic extended spectrum β-lactamase detection guideline in the routine setting  T.N. Platteel, J.W. Cohen Stuart, A.J.
Serotypes, genotypes and antimicrobial resistance patterns of human diarrhoeagenic Escherichia coli isolates circulating in southeastern China  Y. Chen,
Presentation transcript:

Environmental stress exacerbate the emergence of Multidrug Resistant Bacteria – Global health hazard Hemlata and ArchanaTiwari* School of Sciences, Noida International University, Gautam Budh Nagar, India Abstract: Environmental pollution triggers myriad of wildlife and public health hazards. Wastewater treatment as well as hospital effluents are “hot spots” for the transmission of resistant bacteria. Multidrug resistant bacteria (MDR) have been found widely in aquatic environments majorly in rivers where they originate from anthropogenic sources; such as hospital, municipal, and aquaculture effluents. Both anthropogenic and naturally occurring MDR in aquatic ecosystem triggers human health as infected by MDR through drinking water, aquatic edibles and direct contact with water bodies. Aquatic environment has direct intimate contact with human life due to continuity of the water body that may transport antibiotic resistance to every corner of the world as compared with soil. Waste water effluents nurture resistance genes and genetic elements that promote their genetic exchange between bacteria. Commensals or pathogens are important sources of resistance genes that cause human infections and disease. This leads to infections causing higher morbidity and mortality and imposing huge costs on our society. The selective pressure of above discussed factors emerges the new category of multidrug resistant bacteria named Extended Spectrum of β-lactamases (ESBLs) common ones include TEM, SHV, OXA, and recently evolved CTX-M of third generation cephalosporins for the treatment of severe infections. In this study water samples was collected from tertiary phase effluent spot Yamuna action sewage treatment plant, Haryana; that harbors a variety of MDR later on enter in ecosystem via food chain or food web and causing health hazard. We focused on prevalence of MDR genes in environment. 110 non-duplicate isolates screened, 70 were found to be positive for ESBL production through clinical and laboratory standards institute (CLSI) agency of USA. Environmental Selective pressure of different kinds of wastes accelerates the emergence of multi drug resistance bacteria. Innovative advanced water treatments approaches need to be investigated that are focused on the quality treatment and effectively measure. Introduction: Ecological nutrient cycling is the pathway of exchange of organic and inorganic materials and environment pollution through STP’s harbor the growth of Multidrug resistant bacteria. The selective pressure and exposure to heavy metals, pesticides, and herbicides as non-biodegradable naturally selects organisms with the genes of resistance necessary for their survival. These metals are used in various industries from which effluents are consequently discharged into the environment and accelerates this notorious phenomenon Methodology: Isolation and Screening of bacterial isolates: Water sample was collected from tertiary phase effluent spot of Yamuna action sewage treatment plant, Palwal, Haryana. Sample was serially diluted and spread on LA plates for selection of morphologically non-duplicate colonies and streaked to get pure culture. ESBL Test: Bacterial isolates were screened for ESBL production by preliminary test and Phenotypic Disc Confirmatory Test (PDCT) according to CLSI guidelines. Antibiotic Sensitivity test: Resistant isolates were tested for susceptibility towards wide range of antibiotics using Kirby-Bauer method and their MIC was determined. 16S rDNA profiling: 16S rRNA genes were amplified using gene specific primers and sequenced. Amplification of blaCTX genes: ESBL genes blaCTX were amplified from genomic DNA using gene specific primers and sequenced. Results: A total of thirty colonies growing on Luria agar plates were used for screening of ESBL production. Screenings of isolates for ESBLs production: Preliminary Test: Twelve isolates were found positive in preliminary test for ESBL. Phenotypic Disc Confirmatory Test (PDCT): A total of twelve isolates were confirmed for ESBL production in PDCT showing a ≥ 5 mm increase in zone diameter for antibiotic CAZ and CTX + clavulanic acid than antibiotic alone. Antibiotic Sensitivity test: Phenotypicaly ESBL positive E.coli isolates were subjected to susceptibility tests towards eight different antibio- tics for the determination of Zone of Inhibition (ZOI). 16S rRNA gene based characterization of bacterial isolates: PCR successfully amplified approximately 650bp fragment corresponding to partial 16S rRNA gene. The amplified product was sequenced. PCR amplification of blaCTX gene: ̴ 860 bp fragment corresponding to complete blaCTX gene was successfully amplified from genomic DNA of eleven ESBL positive isolates. Fig 1: Bacterial colonies growing on LA media. 1 2 3 4 5 6 7 8 9 10 11 12 M ̴ 650 bp Fig 5: PCR based amplification of 16S rRNA gene (~650 bp). Lane M: 100 bp DNA ladder Lane 1-12: Amplified 16S rRNA gene in different isolates. Table 1: Zone of inhibition of CAZ, CTX and CTR. Isolates Ceftazidime Cefotaxime Ceftriaxone AT1 21 28 AT2 20 AT3 23 AT6 22 30 AT7 19 25 24 AT8 18 AT9 12 AT13 34 AT14 27 33 AT15 26 31 AT16 AT18 EC KP 09 16 16S rRNA Gene Oligo Sequence Forward Seq. GGCGGACGGGTGAGTAATG Reverse Seq. ATCCTGTTTGCTCCCCACG Fig 2: Plates showing zone of inhibition for antibiotics CAZ, CTX and CTR. blaCTX Gene Oligo Sequence Forward Seq. SCVATGTGCAGYACCAGTAA Reverse Seq. GCTGCCGGTYTTATCVCC 1 2 3 4 5 6 7 8 9 10 11 +C M ̴860 bp Table 2: ZOI (mm) of antibiotic and antibiotic + clavulanic acid Bacterial Isolates Ceftazidime Ceftazidime + Clavulanate Cefotaxime Cefotaxime + Clavulanate AT1 30 31 26 AT2 20 21 24 22 AT3 33 35 AT6 38 AT7 11 28 29 32 AT8 25 AT9 13 AT13 39 36 AT14 34 AT15 AT16 27 AT18 35s EC KP 09 16 23 Fig 3: Plates showing a ≥ 5 mm increase in zone of inhibition Fig 6: PCR based amplification of blaCTXgene (~860 bp). Lane M: 100 bp DNA ladder . Lane 1-11: Amplified blaCTX-M gene product. Lane +C: Positive control Fig 7: Phylogenetic Tree of identified isolates with different variants of blaCTX-M. Table 3: ZOI (mm) of different antibiotics against bacterial isolates. AK AMP CIP CX CXM IPM OF TOB Isolates ZOI S/I/R AT1 17 S 12 R 06 18 22 I AT2 15 16 20 28 AT3 11 13 10 AT6 19 AT7 21 24 27 AT8 25 AT9 37 30 41 35 AT13 AT14 AT15 14 23 AT16 08 AT18 26 EC 31 KP Conclusion: Bacterial isolates collected from STP were found to harbour ESBL genes which are of common occurrence among clinically important isolates. Out of twelve ESBL+ isolates, eleven were found positive for blaCTX-M genes representing a high prevalence of ESBL genes among environmental isolates. Isolates resistant to β-Lactams were also tolerant to other classes of antibiotics presenting a multidrug resistant phenotype. Study of resistance pattern in environmental isolates would help to prevent development and spread of resistance genes. Fig 4: Zone of inhibition of different antibiotics against bacterial isolate.  References Hemlata, Arif Tasleem Jan and Archana Tiwari (2016). CDM. 17, 0000-000. Davies J and Davies D (2010). Microbiol. Mol Biol Rev. 74: 417-433. WHO (2014) Global Tuberculosis Report. Berdy J (2012). J Antibiot. (Tokyo). 65: 385–395. Positive control : Klebsiella pneumoniae (ATCC 700603); Negative control: E.coli (ATCC 25922) Acknowledgement :