Genome Database for Rosaceae Newly designed GDR, Genome Database for Rosaceae Sook Jung, Taein Lee, Chun-Huai Cheng, Ping Zheng, Jodi Humann, Sushan Ru, Kristin Scott, Morgan Frank, Jing Yu, Ksenija Gasic, Jim McFerson, Kate Evans, Cameron Peace, Lisa DeVetter, Dorrie Main

GDR Data 16 Genome assemblies 242,182 Genes 180 Genetic Maps 2,900,263 Markers 2,695 QTLs and MTLs 18,641 Germplasm 10,511,195 Genotypes 876,885 Phenotypes 6,888 Publications

GDR Homepage

Genus overview page

Genus page: Genomes

Genome page

Genus page: Synteny viewer New synteny analysis among Prunus persica v2.0, Fragaria vesca v2.0, Malus x domestica v3.0p, and Pyrus communis v1.0

Tools Quick Start (Genomics)

Search Genes

Gene Search Results

Gene/mRNA parsed from NCBI nr database

Tools Quick Start (Genetics)

Search Markers

Marker Search Result

Marker Page

Search SNP Markers

Tools Quick Start (Breeding)

Breeders Toolbox: Phenotype Search

Breeders Toolbox: Phenotype Search

Breeders Toolbox: Phenotype Search Result Breeders toolbox will be replaced with the new BIMS system where breeders can upload their own data

Main Header Bar

Main Header Bar: Search

SNP Genotype Search

SNP Genotype Search Result

Search QTL

Search results

Main Header Bar: Data

Data Overview

Main Header Bar: Data

Gene Class in Rosaceae

Gene Class in Rosaceae

Rosaceae Trait Ontology

Future Development BIMS (Breeding Information Management System) Map Viewer (Integrated comparative map viewer) Site-wide search Bio-Mart type search/download tools All these are being developed as Tripal Modules Current Mainlab modules (template/loader, data display, search modules) have been released

Funding and Acknowledgement