Comparisons of “even” mock communities (a) and “staggered” mock communities (b) sequenced by MiSeqPE300 and HiSeqPE250. Comparisons of “even” mock communities.

Slides:

Advertisements

Similar presentations

Advertisements

16S rRNA gene abundance and total gene expression of Tannerella species in healthy patient and periodontitis patient samples. 16S rRNA gene abundance and.

فرایند تسهیلگری در مددکاری جامعه ای

Mean VAS pain scores at baseline and at each protocol-specified follow-up time point through 2 years. Mean VAS pain scores at baseline and at each protocol-specified.

Mean ODI disability scores at baseline and at each protocol-specified follow-up time point through 2 years. Mean ODI disability scores at baseline and.

Patients with SLE have elevated ERV expression.

Changes in archaeal diversity during great ape diversification.

The effect of bisphenol A (BPA) on colon and liver inflammation.

Chenguang Zheng, Kevin Wood Bieri, Yi-Tse Hsiao, Laura Lee Colgin

Gut environment context affects C

Uncovering a Tumor Suppressor for Triple-Negative Breast Cancers

Influence of do-not-resuscitate (DNR) order specification on overall survival in chronic obstructive pulmonary disease (COPD) patients (log rank test p

Sequencing at 10,000x using Illumina paired reads

Changes in evaluation indicators from baseline to 12 weeks per visit.

Bacterial biomarkers associated with disease severity.

Differential abundance of bacterial families.

Optimized KatharoSeq protocol applied to a JPL cleanroom facility.

Voluntary but not forced exercise alters food consumption in mice.

Rank abundance plots by taxonomic genus assignments for metagenomic data (top three rows) and metatranscriptomic data (bottom two rows). Rank abundance.

Succession of the butyrate-producing community after birth.

Differences in microbiome between control and BPA-exposed rabbit offspring and dams according to linear discriminant analysis effect size (LEfSe). Differences.

Comparison of microbial communities in adult and children visitors and villagers. Comparison of microbial communities in adult and children visitors and.

Structure of benthic microbial communities of residential and industrial land use types before and after two rain events in urban waterways are shown.

Baseline Patients with coronary artery disease (CAD) and high (n=98) versus normal (n=1512) high-density lipoprotein (HDL) levels Doreen DeFaria Yeh, et.

Field community comparisons via 16S and between sequencing runs.

Abilities of C. muridarum with or without mutations in tc0668 and/or tc0237 to spread to the GI tract and induce hydrosalpinx in the genital tract. Abilities.

Metabolite predictability across metabolic categories (A) and disease states (B) in the vaginal microbiome. Metabolite predictability across metabolic.

Plasma biomarker concentrations between study groups.

Label frequency and average enrichment of taxa.

RNA abundance correlates with fitness.

The SI-Induced Increase in PA Levels Is Mediated by PbrPLDδ1 in Pollen

Comparisons of “even” mock communities (a) and “staggered” mock communities (b) sequenced by MiSeqPE300 and HiSeqPE250. Comparisons of “even” mock communities.

Fig. 4. Effect of royal jelly on silkmoth fat body cells and eggs.

Table 1. Menthol preference index (MPI) and average number of eggs laid per female (EPF) in F0 and F1 lines.The statistical significance of MPI was assessed.

Microbial communities of the differently treated mice with lupus cluster separately after treatment. Microbial communities of the differently treated mice.

Alterations in cardiorespiratory fitness and body composition following exercise interventions, protein interventions, and combined interventions. Alterations.

Benchmarks of OTU picking tools on artificial communities.

(A) yellow cDNA comparison among wild-type and ch mutants

Growth of Salmonella and E. coli in egg white.

(A and B) Unweighted (A) and weighted (B) UniFrac clustering of three 16S rRNA hypervariable regions using fragment insertion SATé-enabled phylogenetic.

Ability of C. muridarum with or without mutations in tc0668 and/or tc0237 to induce hydrosalpinx in C3H/HeJ mice following intravaginal inoculation. Ability.

Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Heatmaps reveal.

miR-145 regulates embryo attachment.

Differences in Verrucomicrobia genera across plant community types.

Beta-amplitude effects cannot be explained by differences in initial amplitude or phase stability. Beta-amplitude effects cannot be explained by differences.

Fig. 1. Effects of royal jelly on silkmoth body size.

OTU and family-level changes in murine gut as a result of acarbose feeding on a high-starch diet. OTU and family-level changes in murine gut as a result.

John P. Boehmer et al. JCHF 2017;5:

Dynamic changes in the levels of sex hormones (panel A for LH and panel B for LH/FSH), brain-gut mediators (panel C for ghrelin and panel D for PYY), and.

Differential alterations of metabolites associated with synthesis of lipopolysaccharide (A) and peptidoglycan (B) in strains PAK and PAKpmrB6 in response.

Nucleotide sequences of the IS1016-bexAdeletion region of type b strain Hib and type a strains 1, 2, and 5. Nucleotide sequences of the IS1016-bexAdeletion.

Antitumor immunity caused by DS-8201a.

Fig. 1 The seven nasal CSTs and their respective bacterial densities shown in boxplots and composition shown in heatmap visualization and non-metric multidimensional.

Pre- and post-vorinostat values of ER-related gene expression using the Oncotype DX 21-gene assay. Pre- and post-vorinostat values of ER-related gene expression.

Comparison between early-life and year 2 AMR levels.

Normalized abundance of tetracycline resistance genes in Swedish infants by AMR++. Normalized abundance of tetracycline resistance genes in Swedish infants.

Fig. 3 Evaluating the accuracy of speech separation and attention decoding methods. Evaluating the accuracy of speech separation and attention decoding.

Convergent expansion in less predominant B-lineage clones.

Forest plot of major bleeding: the measure of the effect of morphine versus nonmorphine on major bleeding in each study was plotted using OR and 95% CI.

Relative abundance of taxa in the 16S rRNA PCR amplicon and gDNA mock communities. Relative abundance of taxa in the 16S rRNA PCR amplicon and gDNA mock.

Microbial taxonomy and interaction of oral biofilms over time.

Acarbose reversibly changes the structure of the murine gut community.

Time to culling for mastitis among J5 vaccinates and controls

Distinct antibiotic pretreatments have differential impacts on C

Fig. 3. Association between peak CTL019 expansion and response.

Comparison of 16S sequencing and shallow shotgun recovery of species-level taxa. Comparison of 16S sequencing and shallow shotgun recovery of species-level.

Association between genome size and the dN/dS ratio for archaeal (A; n = 21) and bacterial (B; n = 28) genome pairs and association between coding density.

Time to culling for all reasons among J5 vaccinates and controls

Comparison of C. muridarum organisms with or without a deficiency in pGP3 for their ability to induce hydrosalpinx in the upper genital tract and spread.

Kros of Single grf Knockout Mutants.

Presentation transcript:

Comparisons of “even” mock communities (a) and “staggered” mock communities (b) sequenced by MiSeqPE300 and HiSeqPE250. Comparisons of “even” mock communities (a) and “staggered” mock communities (b) sequenced by MiSeqPE300 and HiSeqPE250. Values that are significantly different for a clone by MiSeqPE300 versus HiSeqPE250 are indicated with an asterisk before the clone name (P < 0.05 by Wilcoxon rank sum test). Significant differences in the whole-community composition by MiSeqPE300 and HiSeqPE250 were found only in the even mock community (P < 0.05 by ANOSIM test). Yi-Chun Yeh et al. mSystems 2018;3:e00023-18 Copyright © 2018 Yeh et al.