Diego Scardaci (EGI.eu)

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Presentation transcript:

Diego Scardaci (EGI.eu) EGI DataHub Training Diego Scardaci (EGI.eu) Technical Outreach Expert diego.scardaci@egi.eu

Outline What is the EGI DataHub Training testbed Exercise 1: Access Copernicus Data stored in the EGI DataHub Exercise 2: Create a new space in the EGI DataHub Create a new space Support it with your provider Upload data through the web interface Exercise 3: Access data with OneClient Mount a virtual file-system in your machine Create a new file in the virtual file-system Download the file from the EGI DataHub web interface Exercise 4: Share your data! Give access to your test data to the other attendees TODOs:

EGI DataHub EGI DataHub single point of entry for Data sets published and managed on EGI federated infrastructure provides access to reference scientific data of public interest hosts experimental or temporary scientific data supports fine-graind access policies 22-9-2018 DI4R Digital Infrastructures for Research, September 2016, Krakow

Training testbed

5 pre-installed providers available for you Testbed Central EGI DataHub datahub.egi.eu 5 pre-installed providers available for you deployed into the EGI Federated Cloud 5 groups to be formed 1 provider will be assigned to each group Access via ssh needs a key IP and credentials to access will be given to each group

Excercise 1 Access Copernicus Data stored in the EGI DataHub

Exercise 1 Access Copernicus Data in the EGI DataHub What you have to do: Login to the EGI DataHub You can use your EGI SSO or your institute IdP Access the PlGrid provider Download some Copernicus files

Log into the EGI DataHub (1) Open your browser and go to datahub.egi.eu Select EGI

Log into the EGI DataHub (2) Choose EGI SSO or your IDP Select Accept Insert your username and password Select Yes You are now logged in!

Access Copernicus Data 3. Select Go to your files 1. Select GO TO YOUR FILES 2. Select PlGrid provider

Provider view Click on a file to download it Go through the folders

Excercise 2 Create a new space in the EGI DataHub

Exercise 2 Create a new space in the EGI DataHub What you have to do: Create a new space in the EGI DataHub Support the new space with your provider Get a token to support the new space Login into the web admin interface of your provider Support the new space with some storage Upload some data on the new space through the web interface

Create a new space Create new space Choose a name

Support the new space with your provider Select the just created space Click on Get support and copy the token

Support the new space with your provider (1) Open your browser and access the OneProvider web administration interface: https://<OneProvider IP>:9443 Credentials Username: admin Password: password

Support the new space with your provider (2) Your provider is now supporting the new space Select Support Space Copy here your token Select the amount of storage NB: test provider can offer not more than 20 GB

Upload data in the new space (1) Go back to the EGI DataHub web interface The new space is now supported by your provider. 2. Select Go to your files in the map 1. Select your provider name under the space

Upload data in the new space (2) You will be redirected to the OneProvider user interface Select the new space

Upload data in the new space (3) Upload some files

Excercise 3 Access data with OneClient

Exercise 3 Access data with OneClient What you have to do: Get an access token from the EGI DataHub web interface Mount the virtual file-system with OneClient Access your OneProvider machine via ssh Configure and run OneClient Create a new file in the virtual file-system Download the new file from the EGI DataHub web interface Unmount the virtual file-system

Get an access token 2. Copy the Token 1. Select Access Tokens

Log into the OneProvider Log into the OneProvider shell ssh –i <your_key> ubuntu@<Oneprovider IP> Configure OneClient Create a folder to mount the OneData virtual file-system and export the mount point ~$ export PROVIDER_HOSTNAME=<Oneprovider IP> ~$ export ONECLIENT_AUTHORIZATION_TOKEN=‘<Token>’ ~$ mkdir onedata ~$ export MOUNT_POINT=/home/ubuntu/onedata

Mount the virtual file-system Check the content ~$ oneclient --authentication token $MOUNT_POINT --no-check-certificate Connecting to provider '147.228.242.168' ... Getting configuration ... oneclient has been successfully mounted in /home/ubuntu/onedata ~$ cd onedata/ ubuntu@stoor168:~/onedata$ ls -la total 4 drwxr-xr-x 1 root root 0 Sep 29 09:24 . drwxr-xr-x 7 ubuntu ubuntu 4096 Sep 29 12:26 .. drwxrwxr-x 1 root 1338303 0 Sep 29 11:59 MySpaceX drwxrwxr-x 1 root root 0 Sep 29 09:28 Sentinel2

Work with the virtual file-system Create a new file under your space Go back to the web interface and download the new file ~/onedata$ cd MySpaceX/ ubuntu@stoor168:~/onedata/MySpaceX$ cat TestOneClient.txt my first test with OneClient.

Unmount the virtual file-system ~$ fusermount -u /home/ubuntu/onedata

Exercise 4 Share your data

Go to the Oneprovider interface and generate space join token Share your data! Go to the Oneprovider interface and generate space join token

Give it to another group

Copy the invite user token

Give it to another group who should join your space