For Monochromatic Imaging

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Presentation transcript:

For Monochromatic Imaging Learning from Raw Data For Monochromatic Imaging Wenxiang Cong, Ge Wang Biomedical Imaging Center, CBIS/BME/SoE Rensselaer Polytechnic Institute November 19, 2017

Outline Introduction Dual-energy Data Decomposition Monochromatic Imaging Discussions

Outline Introduction Dual-energy Data Decomposition Monochromatic Imaging Discussions

X-ray Monochromatic Imaging Quantify absorption, scattering, electrical density, and atomic number Reduce beam-hardening Perform material discrimination Facilitate detection & diagnosis

Basic Framework Numerical Training Dual-energy Datasets Projection Decomposition Dual-energy Network Monochromatic Projection Grayscale Image Monochromatic Network Monochromatic Reconstruction

Outline Introduction Dual-energy Data Decomposition Monochromatic Imaging Discussions

Projection Decomposition Based on the physical decomposition of the linear attenuation characteristics:

Single Variable Optimization The quartic equation has an analytic solution: W. Cong, D. Harrison, Y. Xi, G. Wang: Projection Decomposition Method for Dual-energy Computed Tomography, IEEE Transactions on Radiation and Plasma Medical Science, pending revision

Projection Decomposition PE Compton Truth Recon

Dual-energy Neural Network I1 I2 Radial Basis Function (RBF) neural network I1 and I2 are measured intensities of dual-energy data. Monochromatic projection = The neural network is trained for projection decomposition from dual-energy data

Radial Basis Function (RBF) method PE Compton Truth Recon

Outline Introduction Dual-energy Data Decomposition Monochromatic Imaging Discussions

X-ray CT Physical Model Model Mismatch!

Physical Model Based on the integral mean value formula, there is a energy for any x-ray path such that the measured intensity can be exactly formulated as a line integral: Energy relies on the x-ray path and materials. The polychromatic x-ray spectrum is the reason for beam-hardening in conventional CT images

Physical Model For an attenuation image at a specific energy level the line integral is accurate: The purpose is to compensate for inconsistent energy levels to match the ideal model through a function :

Learning from Sinogram Data The map can be established to describe the relationship between ideal data and CT images using deep learning techniques: The trained neural network will produce accurate data to overcome the beam-hardening problem and even facilitate monochromatic CT imaging.

Deep Learning Input data X= (x1, x2,…,xm) x1 x2 x3 xm is grayscale image pixel values associated with an x-ray beam, and P is a corresponding monochromatic projective value

Network training Neural network was designed to have four layers, one input layer, two hidden layers, and one output layer Activation function is rectified Linear Unit (ReLU) Training procedure was run in the TensorFlow framework Training is based on numerical simulation to generate monochromatic projection We just got real data with multiple energy in processing

Numerical Simulation (a) (b) Monochromatic reconstruction. (a) The ground truth, (b) the reconstructed image via deep learning.

Outline Introduction Dual-energy Data Decomposition Monochromatic Imaging Discussions

Discussions Realistic simulation with visible human datasets and others of similar nature Work in progress, processing more real datasets for the neural network training Deeper & more advanced neural network structures

Colorized Visible Human Based on dual-energy CT scans, we can generate real monochromatic training datasets for deep reconstruction (work in progress, in collaboration with professors with BIT, China)

Thanks!