Optimising direct PCR from anagen hair samples

Slides:



Advertisements
Similar presentations
The most efficient STR loci in forensic genetics in population of central Poland R. Jacewicz, M. Jedrzejczyk, J. Berent Forensic Science International:
Advertisements

A comparison of AmpFlSTR Identifiler™ Kit versus AmpFlSTR Identifiler Plus™ Kit in challenging bone samples by using normal and increased PCR cycle number 
Collection protocols for the recovery of biological samples
A comparison of AmpFlSTR Identifiler™ Kit versus AmpFlSTR Identifiler Plus™ Kit in challenging bone samples by using normal and increased PCR cycle number 
The end of bad hair days  Oliva Handt, Adrian Linacre 
V. Kallupurackal, T. Kausel, A. Sulzer, P. Voegeli, A. Kratzer 
Genetic profiling from challenging samples: Direct PCR of touch DNA
S. Alimat, S. Hadi, W. Goodwin 
R. Alghafri, W. Goodwin, S. Hadi 
N. Cerri, S. Cisana, V. Cortellini, A. Verzeletti, A. Agostino, F
An evaluation of miniSTR markers for casework applications
Performance of the RapidHIT™200
A. Barbaro, P. Cormaci, G. Falcone 
S. Burch, A. Sulzer, P. Voegeli, N.V. Morf, M. Gysi, A. Kratzer 
Use of universal reporter primers in multiplex PCR of autosomal loci
Duration of in situ fluorescent signals within hairs follicles
Forensic identification of 12 mammals species based on size variation of mitochondrial cytochrome b gene using multiplex PCR assay  M. Črček, K. Drobnič 
Probabilistic modelling for DNA mixture analysis
Efficiency of DNA IQ System® in recovering semen DNA from cotton swabs
C. Davies, J. Thomson, F. Kennedy 
The effect of increased cycle numbers using the Quantifiler® Duo DNA Quantification Kit (AB) on the detection of minute amounts of male DNA in mixtures.
DNA typing of trace DNA recovered from different areas of sandals found at a homicide crime scene investigation: A comparative study  Samuel T.G. Ferreira,
Establishment of Italian national DNA database and the central laboratory: Some aspects  R. Biondo, F. De Stefano  Forensic Science International: Genetics.
Sabine Michel, Anne De Bast, Isabelle Vandenbroere, Olivier Froment 
Timothy J. Verdon, R. John Mitchell, Roland A.H. van Oorschot 
U. Ricci, I. Carboni, S. Iozzi, A. Gozzini, F. Torricelli 
Quantification of trace amounts of human and non-human mitochondrial DNA (mtDNA) using SYBR Green and real time PCR  Shanan S. Tobe, Adrian Linacre  Forensic.
Population data for SE33 locus in United Arab Emirates Arab population
Development of a SNP-STRs multiplex for forensic identification
Rapid STR analysis of single source DNA samples in 2h
Multiplex-direct PCR assay for foodborne pathogen identification: An application in forensic investigation  Laila Hasap, Phuvadol Thanakiatkrai, Kamonnut.
S. Iyavoo, A. Wolejko, D. Furmanczyk, R. Graham, R. Myers, T. Haizel 
Test of the rapid PCR method using AmpFlSTR Identifiler kit
Combining DNA evidence for greater match information
Oskar Hansson, Peter Gill 
J. Hedman, L. Albinsson, L. Norén, R. Ansell 
Advancing forensic RNA profiling: Preventing noise signals in RNA profiling by adding the multiplex buffer last  Margreet van den Berge, Titia Sijen 
A. Trindade-Filho, C. Mendes, S. Ferreira, S. Oliveira, A
Body fluid mixtures: Resolution using forensic microRNA analysis
Genetic structure of Moroccan population using 15 STRs of NGM kit
Thitika Kitpipit, Phuvadol Thanakiatkrai, Wilaiwan Chotigeat 
P. Dario, A. R. Oliveira, T. Ribeiro, M. J. Porto, J. Costa Santos, D
Efficient DNA extraction from hair shafts
A novel forensic DNA profiling technique for protected species
Evaluating DNA profiles using peak heights, allowing for dropin, dropout and stutters  Roberto Puch-Solis  Forensic Science International: Genetics Supplement.
Joanne L. Simons, Amelia Gamblin, Laura Arnold, Sue C. Vintiner 
DIP–STR: A new marker for resolving unbalanced DNA mixtures
A comparison of AmpFlSTR Identifiler™ Kit versus AmpFlSTR Identifiler Plus™ Kit in challenging bone samples by using normal and increased PCR cycle number 
Doing more with less: Implementing direct amplification with the PowerPlex® 18D System  Rita Weispfenning, Kathryn Oostdik, Martin Ensenberger, Benjamin.
Determination of siblings: A special case report from Halle
Forensic analysis of soils using single arbitrarily primed amplification and high throughput sequencing  Anastasia S. Khodakova, Leigh Burgoyne, Damien.
On the exact distribution of the numbers of alleles in DNA mixtures
Low-cost direct PCR for aged and processed wildlife sample analysis
Testing the behavior of GlobalFiler® PCR amplification kit with degraded and/or inhibited biological samples  V. Bogas, M. Carvalho, F. Corte-Real, M.J.
Tiger species identification based on molecular approach
Application of less primer method to commercial kits
Linda Albinsson, Johannes Hedman, Ricky Ansell 
How degraded is our DNA? A review of single source live case work samples with optimal DNA inputs processed with the PowerPlex® ESI17 Fast kit  D. Moore,
Simulated approach to estimate the number and combination of known/unknown contributors in mixed DNA samples using 15 short tandem repeat loci  Sho Manabe,
DNA recovery from a 44-year old umbilical cord
A method to identify a large number of mammalian species in the UK from trace samples and mixtures without the use of sequencing  Shanan S. Tobe, Adrian.
Effects of the most common methods for the enhancement of latent fingerprints on DNA extraction from forensic samples  S. Gino, M. Omedei  Forensic Science.
Dmitriy A. Khodakov, Anastasia S. Khodakova, Adrian Linacre, Amanda V
Purification and concentration of PCR products leads to increased signal intensities with fewer allelic drop-outs and artifacts  L.M.I. Pedersen, M. Stangegaard,
Analysis and interpretation of difficult samples—The interaction of a DNA quantification kit with the right STR assay may facilitate processing of critical.
Genetic data for the locus SE33 in a Southern Italy population with AmpFlSTR NGM SElect™ PCR amplification kit  A. Barbaro, P. Cormaci, A. La Marca  Forensic.
Development of a 24-plex Y chromosomal STR loci typing system
Experiences and surprises with PowerPlex ESI 17 and AmpflSTR NGM SElect in routine casework  Franz Neuhuber, Eva Klausriegler, Bettina Dunkelmann, Gabriele.
First application of the Investigator DIPplex indels typing kit for the analysis of ancient DNA samples  C. Hollard, F. Mendisco, C. Keyser, E. Crubézy,
A.M. Ölçen, G. Filoğlu, H. Altunçul, S. Erdem, Ö. Bülbül 
Presentation transcript:

Optimising direct PCR from anagen hair samples Renée Ottens, Duncan Taylor, Damien Abarno, Adrian Linacre  Forensic Science International: Genetics Supplement Series  Volume 4, Issue 1, Pages e109-e110 (January 2013) DOI: 10.1016/j.fsigss.2013.10.056 Copyright © 2013 Elsevier Ireland Ltd Terms and Conditions

Fig. 1 Chromatogram of nuclear DNA from a single anagen hair root, amplified using AmpFλSTR® NGM™ kit at 29 cycles on a GeneAmp® System 9600 thermal cycler. Figure shows 8 loci from NGM™ kit. PCR sample was analysed neat and diluted to a concentration of 1:50 before it was injected on an Applied Biosystems 3130xl Genetic Analyser at 3kV for 10s. Red circles indicate split peaks and black squares indicate pull-up in the neat sample. Split peaks and pull-up is not observed in the diluted sample. Forensic Science International: Genetics Supplement Series 2013 4, e109-e110DOI: (10.1016/j.fsigss.2013.10.056) Copyright © 2013 Elsevier Ireland Ltd Terms and Conditions