DNA Clean-Up Using MagNA Beads
Library Prep Using the “With-Bead” Method
Blunt-end repair Shearing the genomic DNA Adapter ligation Fill-in Pre-hybridization PCR “with-beads”
Shearing the genomic DNA
Blunt-end repair
Blunt-end repair
Adapter ligation
Adapter ligation IS7 INLINE INDEX DNA INLINE INDEX IS8
Adapter ligation
Fill-in
Fill-in
Pre-hybridization PCR “with-beads”
Gene capture for target sequencing
Hybridization Bind to beads and wash Post-hybridization indexing PCR
Gene capture
Add 3 µL of the mixture to each of the empty tubes labeled Target enrichment – capture with sample name, and then add 7 µL of “PreH” sample (adjust according to conc., usually 100ng ~ 500ng in total) to each tube
IS7 INLINE INDEX DNA INLINE INDEX IS8
HYB Baits Mix(19µL) Lib Mix(10µL) HYB Baits Mix Lib Mix(10µL) 95 °C 65 °C 65 °C 60 °C 55 °C 50 °C 50 °C 5 min 5 min 300 min 300 min 300 min 300 min forever
Bind to beads and wash Please don’t stop the pcr program, we will still use it. Open the hybridization machine before you do the experiment.
Bind to beads and wash
Bind to beads and wash
Post-hybridization indexing PCR
Adapter ligation P5 IS7 INLINE INDEX DNA INLINE INDEX IS8 P7