Discovering neuronal interactions,

Slides:



Advertisements
Similar presentations
Neural Signaling: Postsynaptic Potentials Lesson 9.
Advertisements

What is matter, never mind What is mind, doesn’t matter. Or Does it !!??
The abrupt transition from theta to hyper- excitable spiking activity in stellate cells from layer II of the medial entorhinal cortex Horacio G. Rotstein.
Lecture 12: olfaction: the insect antennal lobe References: H C Mulvad, thesis ( Ch 2http://
Vision, Hearing, and Smell: the Best-Known Senses
Database Engines for Bioscience John Corwin Avi Silberschatz Swathi Yadlapalli Yale University.
Research Plans Computational Neuroscience Jutta Kretzberg University of Antwerp
Data Landscapes neuinfo.org Anita Bandrowski, Ph. D. University of California, San Diego.
Participate in Cognitive Neuroscience Experiments for extra credit!
Midterm 1 Wednesday next week!. Your Research Proposal Project A research proposal attempts to persuade the reader that: – The underlying question is.
Effects of Excitatory and Inhibitory Potentials on Action Potentials Amelia Lindgren.
Structure and Control of Movement
Software Systems for Neuroinformatics Nigel Goddard Institute for Adaptive & Neural Computation Division of Informatics University of Edinburgh.
Jette Hannibal - Inthinking The nervous system NS: gathers and processes information, produces responses to stimuli, coordinates the workings of different.
Vrije Universiteit Amsterdam Computational Analysis of Spatiotemporal Patterns of Activity in Neuronal Networks Arjen van Ooyen (EN) Arjen Brussaard (EN)
Percolation in Living Neural Networks Ilan Breskin, Jordi Soriano, Tsvi Tlusty, and Elisha Moses Department of Physics of Complex Systems, The Weizmann.
Publishing and Visualizing Large-Scale Semantically-enabled Earth Science Resources on the Web Benno Lee 1 Sumit Purohit 2
Taste and Smell Dr Taha Sadig Ahmed. Taste, gustatory perception, or gustation [1] is the sensory impression of food or other substances on the tongue.
SYSTEMS BIOLOGY AND NEUROENGINEERING Christine P. Hendon, PhD Assistant Professor Electrical Engineering.
1/13/20041 Math 490N: Intro to Neuroscience Cells Neurons Nervous System.
Aim: To understand how the olfactory transduction system is organized Are there several receptor protein “species” each of which detect a class of odorant.
Vienna Conference on Consciousness Part I "What is the neural basis of consciousness? Where is it in the brain?" Contribution by Michael L. Berger (Center.
Figure 15.1 Organization of the human olfactory system.
Grid-based Simulations of Mammalian Visual System Grzegorz M. Wójcik and Wiesław A. Kamiński Maria Curie-Sklodowska University, Lublin, Poland. Abstract.
Neuroscience Information Framework Ontologies: Nerve cells in Neurolex and NIFSTD Maryann Martone University of California, San Diego.
Multiscale Modeling: A Valuable Asset for Therapeutics Development Center for Neural Engineering Jean-Marie C. Bouteiller Theodore W. Berger Sept. 9, 2015.
TEMPLATE DESIGN © In analyzing the trajectory as time passes, I find that: The trajectory is trying to follow the moving.
Aim #1 Engage community Highlight existing: modeling efforts strategic datasets Aim #2 Define and bootstrap an inclusive community-driven model and data-integration.
Conclusions Davis is a freely available data viewer that supports multiple simultaneous views of data with spatial and temporal dependencies. We illustrate.
Senses: Taste and Smell Chemical “conversation” – Especially important for large social groups – Recognize territory (Dog) – Navigate during migration.
Trends in Biomedical Science Making Memory. The following slides are mostly derived from The Brain from Top to Bottom, an Interactive Website about the.
Olfaction. Smell Classification Odors Odorants Anatomy of the Nose Olfactory Cleft Primary Olfaction Cortex Amygdala-Hippocampal Complex Entorhinal Cortex.
Multi-Electrode Arrays (MEAs) March 25, Introduction Multi-electrode Arrays, or MEAs, are quickly becoming a common tool to investigate patterns.
Visualizing Neuron Behavior in Dynamic Mouse Brain Networks Chihua Ma 4/9/2015.
Network-level effects of optogenetic stimulation: experiment and simulation Cliff Kerr, Dan O'Shea, Werapong Goo, Salvador Dura-Bernal, Joe Francis, Ilka.
How Do Brain Areas Work Together When We Think, Perceive, and Remember? J. McClelland Stanford University.
Vincent A. Chiappinelli, Ph.D. The Ralph E. Loewy Professor Chair, Dept. of Pharmacology & Physiology Tel:
Neuroinformatics: sharing, organizing and accessing data and models Arnd Roth Wolfson Institute for Biomedical Research University College London.
Simulation Environments for Neuroscience Presented by Ali Nadalizadeh – IPM – Summer 2009 به نام خداوند بخشنده مهربان.
BIOPHYSICS 6702 – ENCODING NEURAL INFORMATION
The Nervous System- Nervous Tissue
University of California, San Diego
Entrez Neuron: an OWL/RDFa–based Web Application for Information Exploration and Integration in Neuroscience Matthias Samwald, Ernest Lim, Peter Masiar,
Mosaic multiscale computer modeling of ischemic stroke
Development of FunctionalConnectomeDB within SenseLab to incorporate and mine functional connectomics data Luis Marenco1,2,4, Rixin Wang1, Robert A. McDougal1,2,
DESCRIBING NEUROPIL REGIONS IN THE ZEBRAFISH BRAIN
Sense Organs.
Neuroinformatics at Edinburgh
Lateral Inhibition: How does it work
Neuroscience quiz 1 Domina Petric, MD.
Taste: Smell: Touch.
Discovering neuronal interactions,
Biological Bases of Behavior
Sensory systems Domina Petric, MD.
WikiNeuron: Semantic Neuro-Mashup
Origin and function of olfactory bulb interneuron diversity
Effects of Excitatory and Inhibitory Potentials on Action Potentials
Chapter 2 (A): Biological Bases of Behavior
The Senses – The Nose.
Carlos D. Brody, J.J. Hopfield  Neuron 
Neural Signaling: Postsynaptic Potentials
Stop the Biting: Targeting a Mosquito’s Sense of Smell
Regulated Reprogramming in the Regeneration of Sensory Receptor Cells
Synaptic integration.
Cortical Microcircuits
Wei R. Chen, Wenhui Xiong, Gordon M. Shepherd  Neuron 
Claudia Lodovichi, Leonardo Belluscio, Lawrence C Katz  Neuron 
Introduction to Sensation
Neural network model of the experiment and the brain regions associated with information processing. Neural network model of the experiment and the brain.
The canonical microcircuit.
Presentation transcript:

Discovering neuronal interactions, models and properties by browsing microcircuits in multiple spatial scales Luis N. Marenco1, Rixin Wang2, Robert A. McDougal1, Francesco Cavarretta1,4, Monique Surles-Zeigler2, Thomas M. Morse1, Michele Migliore1,4, N. Ted Carnevale1, Michael L. Hines1, Perry Miller2,3, Gordon M. Shepherd1 1Neuroscience Department, 2Center for Medical Informatics, Yale University, New Haven CT 3VA Connecticut Healthcare System, West Haven, CT 4Institute of Biophysics, National Research Council, Palermo, Italy INCF booth Neuroinformatics and olfactory research developments A microcircuit browser enables a Neuroscientist to explore experimental investigations and models of neural networks, cells, and ion channels and receptors. A new tool helps modelers by suggesting keywords for a model they are contributing to modeldb by detecting related phrases in the abstract. A new method predicts, when given an olfactory sensory neuron’s response to two or more odors, what the mixture of arbitrary concentrations of these odors would produce in that olfactory sensory neuron. A multiscale diagram viewer produces views of brain regions, or cells within regions or properties (transmitters, receptors, ion channels) within cells (excitatory - red, inhibitory - blue). A 3D olfactory bulb model using experimentally observed odor responses as inputs to stimulations with learning rules were found to create columns similar to those previously observed with histology. The SenseLab group gratefully acknowledges support from NIH grant R01 DC009977 and NIH grant T15 LM007056.