Whole genome sequencing of Mycobacterium tuberculosis for detection of drug resistance: a systematic review D. Papaventsis, N. Casali, I. Kontsevaya,

Slides:

Advertisements

Similar presentations

A sensitivity and specificity comparison of fine needle aspiration cytology and core needle biopsy in evaluation of suspicious breast lesions: A systematic.

Advertisements

Perri Carlson, Kathryn Nicholson Perry

Journal of Clinical Anesthesia

Reduced turn-around time for Mycobacterium tuberculosis drug susceptibility testing with a proportional agar microplate assay V.A.T. Nguyen, H.Q. Nguyen,

Molecular evolution of Mycobacterium tuberculosis

Cryptococcosis—the impact of delay to diagnosis

Fluoroquinolones or macrolides in combination with β-lactams in adult patients hospitalized with community acquired pneumonia: a systematic review and.

Helicobacter pylori resistance to antibiotics in 2014 in France detected by phenotypic and genotypic methods A. Ducournau, L. Bénéjat, E. Sifré, E. Bessède,

Paravertebral block in paediatric abdominal surgery'a systematic review and meta- analysis of randomized trials E.A. Page, K.L. Taylor British Journal.

The importance of dose in land-based supervised exercise for people with hip osteoarthritis. A systematic review and meta-analysis T. Moseng, H. Dagfinrud,

Next-generation sequencing technologies and their application to the study and control of bacterial infections J. Besser, H.A. Carleton, P. Gerner-Smidt,

Molecular epidemiology and prevalence of mutations conferring rifampicin and isoniazid resistance in Mycobacterium tuberculosis strains from the southern.

J.W.A. Rossen, A.W. Friedrich, J. Moran-Gilad

I.J. Schalk Clinical Microbiology and Infection

Salvage therapy for multidrug-resistant tuberculosis

D. Khalil, M. Hultin, M.U. Rashid, B. Lund

Control of multidrug-resistant Gram-negative bacteria in low- and middle-income countries—high impact interventions without much resources N. Singh,

Association of vancomycin serum concentrations with efficacy in patients with MRSA infections: a systematic review and meta-analysis T. Steinmetz, N.

Migrant health—a cause for concern?

Amplitude-integrated EEG for detection of neonatal seizures: a systematic review Abhijeet Rakshasbhuvankar, Saritha Paul, Lakshmi Nagarajan, Soumya Ghosh,

Novel rapid PCR for the detection of Ile491Phe rpoB mutation of Mycobacterium tuberculosis, a rifampicin-resistance-conferring mutation undetected by.

Whole genome sequencing of clinical isolates of Giardia lamblia

Screening of migrants for tuberculosis identifies patients with multidrug-resistant tuberculosis but is not sufficient P. Helbling Clinical Microbiology.

Rapid and accurate detection of rifampin and isoniazid-resistant Mycobacterium tuberculosis using an oligonucleotide array W.-L. Huang, Z.-J. Hsu, T.C.

Whole genome analysis of Mycobacterium tuberculosis isolates from recurrent episodes of tuberculosis, Finland, 1995–2013 V. Korhonen, P.W. Smit, M. Haanperä,

GidB mutation as a phylogenetic marker for Q1 cluster Mycobacterium tuberculosis isolates and intermediate-level streptomycin resistance determinant in.

A.E. Muller, U. Theuretzbacher, J.W. Mouton

E. Cambau, M. Drancourt Clinical Microbiology and Infection

How to evaluate and predict the ecologic impact of antibiotics: the pharmaceutical industry view from research and development R. Bax Clinical Microbiology.

The importance of enterovirus surveillance in a Post-polio world

Concordant testing results between various human papillomavirus assays in primary cervical cancer screening: systematic review L. de Thurah, J. Bonde,

Evaluation of a novel line probe assay to detect resistance to pyrazinamide, a key drug used for tuberculosis treatment M. Driesen, Y. Kondo, B.C. de.

First isolation of Akkermansia muciniphila in a blood-culture sample

H. Adibhesami, M. Douraghi, M. Rahbar, A. Abdollahi

Hepatitis C: global epidemiology and strategies for control

T. M. Walker, M. Merker, T. A. Kohl, D. W. Crook, S. Niemann, T. E. A

Diagnostic accuracy of leptospirosis whole-cell lateral flow assays: a systematic review and meta-analysis M.J. Maze, K.J. Sharples, K.J. Allan, M.P.

Switch to oral antibiotics in the treatment of infective endocarditis is not associated with increased risk of mortality in non–severely ill patients

Enhanced surveillance of carbapenemase-producing Gram-negative bacteria to support national and international prevention and control efforts R. Freeman

Characterization of Mycobacterium tuberculosis isolated from cancer patients with suspected tuberculosis infection in Egypt: identification, prevalence,

Drugs for Treating Opioid-Induced Constipation: A Mixed Treatment Comparison Network Meta-analysis of Randomized Controlled Clinical Trials Kannan Sridharan,

E.C. Böttger Clinical Microbiology and Infection

Epidemiology of opportunistic infections in AIDS patients

Added value of molecular assay Xpert MTB/RIF compared to sputum smear microscopy to assess the risk of tuberculosis transmission in a low-prevalence country

S. Borrell, S. Gagneux Clinical Microbiology and Infection

Acute phase proteins and IP-10 as triage tests for the diagnosis of tuberculosis: systematic review and meta-analysis V.S. Santos, D. Goletti, K. Kontogianni,

Salvage therapy for multidrug-resistant tuberculosis

L. Zhang, Q. Meng, S. Chen, M. Zhang, B. Chen, B. Wu, G. Yan, X

I. Al Shukri, F. Hamilton, M. Evans, S. Cooper, G. McKenzie, L

Early invasive fungal infections and colonization in patients with cirrhosis admitted to the intensive care unit E. Theocharidou, B. Agarwal, G. Jeffrey,

Evaluation of vancomycin MIC creep in methicillin-resistant Staphylococcus aureus infections—a systematic review and meta-analysis R. Diaz, V. Afreixo,

M. Aires-de-Sousa Clinical Microbiology and Infection

Selection of rifampicin-resistant Mycobacterium tuberculosis does not occur in the presence of low concentrations of rifaximin Ornella Soro, Adelaide.

Detection of Wolbachia genes in a patient with non-Hodgkin's lymphoma

Symposia and Oral Presentations

Sexually acquired Zika virus: a systematic review

Tuberculosis drug-resistance in Lisbon, Portugal: a 6-year overview

Systematic review of antibiotic consumption in acute care hospitals

T. Schön, P. Miotto, C.U. Köser, M. Viveiros, E. Böttger, E. Cambau

Accurate hepatitis C virus genotyping and selection of optimal therapy: lessons from a St Petersburg strain infection E. Knops, E. Heger Clinical Microbiology.

Vaccinations against respiratory tract infections at Hajj

A systematic review of clinical decision support systems for antimicrobial management: are we failing to investigate these interventions appropriately?

Clinical Microbiology and Infection

Virology: a scientific discipline facing new challenges

J.L. Balcázar Clinical Microbiology and Infection

Acquisition of second-line drug resistance and extensive drug resistance during recent transmission of Mycobacterium tuberculosis in rural China Y. Hu,

CMI editorial report, 2016 Clinical Microbiology and Infection

Molecular history of plague

The burden of chikungunya in the Pacific

CMI readers' survey Clinical Microbiology and Infection

Presentation transcript:

Whole genome sequencing of Mycobacterium tuberculosis for detection of drug resistance: a systematic review D. Papaventsis, N. Casali, I. Kontsevaya, F. Drobniewski, D.M. Cirillo, V. Nikolayevskyy Clinical Microbiology and Infection Volume 23, Issue 2, Pages 61-68 (February 2017) DOI: 10.1016/j.cmi.2016.09.008 Copyright © 2016 Terms and Conditions

Fig. 1 PRISMA study selection flow diagram. Clinical Microbiology and Infection 2017 23, 61-68DOI: (10.1016/j.cmi.2016.09.008) Copyright © 2016 Terms and Conditions

Fig. 2 Methodological quality assessment of selected studies using QUADAS-2 tool. (a) Risk of bias and (b) applicability. Clinical Microbiology and Infection 2017 23, 61-68DOI: (10.1016/j.cmi.2016.09.008) Copyright © 2016 Terms and Conditions

Fig. 3 Forest plot of studies evaluating (a) sensitivity and (b) specificity of whole genome sequencing for detection of resistance to rifampicin. Clinical Microbiology and Infection 2017 23, 61-68DOI: (10.1016/j.cmi.2016.09.008) Copyright © 2016 Terms and Conditions

Fig. 4 Forest plot of studies evaluating (a) sensitivity and (b) specificity of whole genome sequencing for detection of resistance to isoniazid. Clinical Microbiology and Infection 2017 23, 61-68DOI: (10.1016/j.cmi.2016.09.008) Copyright © 2016 Terms and Conditions