US GBIF Tools and Services August 12 th, 2010 Giri Palanisamy NBII, ORNL Mike Frame NBII, USGS.

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Presentation transcript:

US GBIF Tools and Services August 12 th, 2010 Giri Palanisamy NBII, ORNL Mike Frame NBII, USGS

NBII-GBIF Services Hosts GBIF mirror for North America Various data extraction services and visualizations IPT prototype installation Trainings/Workshops on DiGIR and IPT Operates UDDI service Supports several Cooperative agreements at Museums & Herbaria in US

GBIF Data Portal GBIF Site: U.S. Mirror: World: - 201,275,468 occurrence records data providers USA: - 83,607,198 records - 91 data providers

Web services to query GBIF data OGC web services: Taxon data service: us.mirror.gbif.org/ws/rest/taxon Occurrence record data service: us.mirror.gbif.org/ws/rest/occurrence Occurrence density data service: us.mirror.gbif.org/ws/rest/density Dataset metadata service: us.mirror.gbif.org/ws/rest/resource Data provider metadata service: us.mirror.gbif.org/ws/rest/provider Data network metadata service: us.mirror.gbif.org/ws/rest/network More information: Web services to query US GBIF data (under development)

GBIF Data Analysis And Extractions for NBII Partners Example GBIF Data Extractions: –Extract data for specific State(s), countries. –Extract data for list of species (plants, birds, butterflies etc..)

GBIF Data Analysis Extractions Cont..

NBII Customized widgets for exploring GBIF data GBIF Widget for Vermont Area

Based on NBII CH/Lucene/Solr index Species occurrences query – gbif.ornl.gov/us_solr/select?indent=on&version=2.2 &q=scientific_name%3A%22Abildgaardia ovata%22&start=0&rows=100&fl=latitude%2Clongitu de&qt=standard&wt=standard&explainOther=&hl.fl= Web Services to Query US GBIF Data

Simple Web Services Client to get occurrence counts

GBIF collection metadata records (EML) are now available in the NBII metadata clearinghouse and in the NBII catalog search. IPT prototype installation available in the NBII servers (for testing prupose) Other NBII-GBIF services

Species Level xml files for NBII Catalog search

GBIF Species Records in NBII Catalog Search

NBII Search screen with GBIF records here……

Provide various easy-to-use visualization tools and web services for extracting NA GBIF data (local, state, regional, country, and thematic level) Enable county level GBIF data visualization and extraction Extend the collaboration activities with new projects such as USVH, DataONE etc.. Enable species mashups on the NBII metadata records Evaluate broader services for all GBIF data Current and future tasks

Questions, Comments Mike Frame Giri Palanisamy