Biogenesis and functions of circular RNAs

Slides:



Advertisements
Similar presentations
Geuvadis main paper figures & tables TL September 26 Very preliminary!
Advertisements

Central dogma DNA is made (transcribed) into RNA RNA is made (translated) into protein.
Visualization of genomic data Genome browsers. UCSC browser Ensembl browser Others ? Survey.
The Molecular Genetics of Gene Expression
P247. Figure 9-1 p248 Figure 9-2 p251 p251 Figure 9-3 p253.
E. coli RNA Polymerase Sequences of E. coli Promoters.
RNA Processing By: Kelvin Liu, Jeff Wu, Alex Eishingdrelo.
8.4 Transcription KEY CONCEPT Transcription converts a gene into a single-stranded RNA molecule.
GenePolypeptide Gene  Polypeptide Transcription 1.RNAP binds to promoter 2.Separates DNA strands 3.Transcribes the DNA (adds RNA nucleotides in a 5'-3'
Chapter 10 Opener. Figure 10.1 Metabolic Diseases and Enzymes.
Prokaryotic cells turn genes on and off by controlling transcription.
( ) 2.2 FC autism control FGR1OP2. ( ) 1.4 FC autism control SMAD2.
Exercise 3 Inspecting the primary structure of a gene.
Primer on Reading Frames and Phase Wilson Leung08/2012.
Gene Expression & Regulation Chapter 8.6. KEY CONCEPT Gene expression is carefully regulated in both prokaryotic and eukaryotic cells.
Eukaryotic Gene Regulation
CHAPTER 8 RNA: Transcription and Processing CHAPTER 8 RNA: Transcription and Processing Copyright 2008 © W H Freeman and Company.
MiRNA ‐ dependent gene silencing involving Ago2 ‐ mediated cleavage of a circular antisense RNA by Thomas B Hansen, Erik D Wiklund, Jesper B Bramsen, Sune.
Invest. Ophthalmol. Vis. Sci ;54(13): doi: /iovs Figure Legend:
Genetics Unit I-Part C Transcription
Accumulation of transcripts from MULE‐F19G14–CyP40 and transposons in mom1 and ddm1. Accumulation of transcripts from MULE‐F19G14–CyP40 and transposons.
What is your FICO IQ Quiz? Link to article attached.
circRNA Biogenesis Competes with Pre-mRNA Splicing
GEP Annotation Workflow
Prokaryotic cells turn genes on and off by controlling transcription.
Mechanisms of lncRNA function.
Yeast containing pICC10 (Tir) and pICC267 (CK18) and pTY474S and pICC267 demonstrated an approximately 12.5‐fold increase in β‐galactosidase activity compared.
Prokaryotic cells turn genes on and off by controlling transcription.
The polypyrimidine tract of βIVS‐II induces efficient 3′‐end formation
From: TopHat: discovering splice junctions with RNA-Seq
AAV viral constructs and Rep expression plasmids.
Consequences of T‐DNA insertion on SWP expression in swp mutant.
Transcription.
The mRNA stem cell signature.
Gene Sizes Vary Strachan p146 DYSTROPHIN.
Nat. Rev. Gastroenterol. Hepatol. doi: /nrgastro
Relationship between Genotype and Phenotype
MicroRNAs: Key Modulators of Posttranscriptional Gene Expression
Daily Warm-Up Dec. 11th -What are the three enzymes involved with replication? What is the function of each? Homework: -Read 13.1 Turn in: -Nothing.
Prokaryotic cells turn genes on and off by controlling transcription.
Spliceosome-Mediated RNA Trans-splicing
circRNA Biogenesis Competes with Pre-mRNA Splicing
Exon Circularization Requires Canonical Splice Signals
Characterization of oligo#5 and its derivatives
Gene Sizes Vary Strachan p146 DYSTROPHIN.
Prokaryotic cells turn genes on and off by controlling transcription.
PlantcircBase: A Database for Plant Circular RNAs
Correlation between DNA methylation and gene expression changes in T2D islets. Correlation between DNA methylation and gene expression changes in T2D islets.
Volume 13, Issue 24, Pages (December 2003)
Transcriptomic and epigenetic changes associated with Factor 1 in the scMT data Transcriptomic and epigenetic changes associated with Factor 1 in the scMT.
Volume 9, Issue 2, Pages (February 2016)
Antiviral Immunity and Circular RNA: No End in Sight
Oligo#5 influences the ratio of the two serotonin 2C receptor isoforms and changes the localization of the full‐length receptor Oligo#5 influences the.
Prokaryotic cells turn genes on and off by controlling transcription.
Prokaryotic cells turn genes on and off by controlling transcription.
Determine CDS Coordinates
Gene Structure.
CiCo relation to linear transcripts.
Enhanced Tailored MicroRNA Sponge Activity of RNA Pol II-Transcribed TuD Hairpins Relative to Ectopically Expressed ciRS7-Derived circRNAs  Anne Kruse.
Gaurav Sablok, Hongwei Zhao, Xiaoyong Sun  Molecular Plant 
Prokaryotic cells turn genes on and off by controlling transcription.
The Biogenesis of Nascent Circular RNAs
Volume 10, Issue 2, Pages (January 2015)
Small RNAs and Immunity
Zofia Szweykowska-Kulinska, Artur Jarmolowski  Molecular Plant 
Gene editing in hemophilia: a “CRISPR” choice?
Gene Structure.
RNA Processing: Redrawing the Map of Charted Territory
Presentation transcript:

Biogenesis and functions of circular RNAs Biogenesis and functions of circular RNAs. (A) A gene can be transcribed and spliced into linear and circular RNAs. Note the unique ‘head‐to‐tail’ splice junctions formed by an acceptor splice site at the 5′ end of an exon and a donor site at the 3′ end of a downstream exon. Biogenesis and functions of circular RNAs. (A) A gene can be transcribed and spliced into linear and circular RNAs. Note the unique ‘head‐to‐tail’ splice junctions formed by an acceptor splice site at the 5′ end of an exon and a donor site at the 3′ end of a downstream exon. A demonstrated role for circRNAs is to act as a microRNA sponge. (B) Pictograms of additional plausible options for circRNA function. See main text for details. Matthias W Hentze, and Thomas Preiss EMBO J. 2013;32:923-925 © as stated in the article, figure or figure legend