BIOGEOCHEMICAL CYCLES

‘Fundamentals’ of biogeochemical cycles All matter cycles...it is neither created nor destroyed... As the Earth is essentially a closed system with respect to matter, we can say that all matter on Earth cycles . Biogeochemical cycles: the movement (or cycling) of matter through a system

by matter we mean: elements (carbon, nitrogen, oxygen) or molecules (water) so the movement of matter (for example carbon) between these parts of the system is, practically speaking, a biogeochemical cycle The Cycling Elements: macronutrients : required in relatively large amounts "big six": carbon , hydrogen , oxygen , nitrogen , phosphorous sulfur

HYDROLOGIC CYCLE

CONNECTS ALL OF THE CYCLES AND SPHERES TOGETHER HYDROLOGIC CYCLE CONNECTS ALL OF THE CYCLES AND SPHERES TOGETHER

HUMAN IMPACTS TO WATER CYCLE Water withdrawal from streams, lakes and groundwater. (salt water intrusion and groundwater depletion) Clear vegetation from land for agriculture, mining, road and building construction. (nonpoint source runoff carrying pollutants and reduced recharge of groundwater) Degrade water quality by adding nutrients(NO2, NO3, PO4) and destroying wetlands (natural filters). Degrade water clarity by clearing vegetation and increasing soil erosion.

Water Quality Degradation

MARINE CARBON CYCLE

TERRESTRIAL CARBON CYCLE

Sources of Carbon from Human Activity Explain Natural Sources of Carbon Sources of Carbon from Human Activity Death of plants and animals Animal waste Atmospheric CO2 Weathering Methane gas from cows (and other ruminants) Aerobic respiration from terrestrial and aquatic life Burning wood or forests Cars, trucks, planes Burning fossil fuels such as coal, oil and natural gas to produce heat and energy.

Carbon in Oceans Additional carbon is stored in the ocean. Many animals pull carbon from water to use in shells, etc. Animals die and carbon substances are deposited at the bottom of the ocean. Oceans contain earth’s largest store of carbon.

IMPORTANCE OF CARBON CYCLE CARBON IS THE BACKBONE OF LIFE!

1. What is no part of the water cycle. A. Precipitation B 1. What is no part of the water cycle? A. Precipitation B. Percolation C. Transpiration D. Surface Runoff E. Boiling 2. Which is not a man made way of adding carbon to the carbon cycle? A. Airplanes B. Natural Fires C. Cars D. Burning fossil fuels 3. What are the predictions for how much carbon will be added from fossil fuels? A. Low B. Medium-Low C. Medium D. High 1. E 2. B 3. D

The Nitrogen Cycle

Sources Lightning Inorganic fertilizers Nitrogen Fixation Animal Residues Crop residues Organic fertilizers

Forms of Nitrogen Urea  CO(NH2)2 Ammonia  NH3 (gaseous) Ammonium  NH4 Nitrate  NO3 Nitrite  NO2 Atmospheric Dinitrogen N2 Organic N

Global Nitrogen Reservoirs Metric tons nitrogen Actively cycled Atmosphere 3.9*1015 No Ocean  soluble salts Biomass 6.9*1011 5.2*108 Yes Land  organic matter  Biota 1.1*1011 2.5*1010 Slow

Roles of Nitrogen Plants and bacteria use nitrogen in the form of NH4+ or NO3- It serves as an electron acceptor in anaerobic environment Nitrogen is often the most limiting nutrient in soil and water.

Nitrogen is a key element for amino acids nucleic acids (purine, pyrimidine) cell wall components of bacteria (NAM).

Nitrogen Cycles Ammonification/mineralization Immobilization Nitrogen Fixation Nitrification Denitrification

R-NH2 NH4 NO2 NO3 NO N2O N2

Which of the following is not part of the Nitrogen Cycle? A) Ammonification B) Nitrification C) Denitrosation D) Nitrogen Fixation E) Denitrification In what form(s) do plants and bacteria use nitrogen? A) NH4+ B) NH3 C) NO3- D) A and C E) All of the above What is the molecular formula for ammonium? A) NH4+ B) NH3 C) NO3 D) NO2 E) none of the above C) Denitrosation D) A and C A) NH4+

Ammonification or Mineralization NH4 NO2 R-NH2 NO NO2 NO3

Mineralization or Ammonification Decomposers: earthworms, termites, slugs, snails, bacteria, and fungi Uses extracellular enzymes  initiate degradation of plant polymers Microorganisms uses: Proteases, lysozymes, nucleases to degrade nitrogen containing molecules

Plants die or bacterial cells lyse  release of organic nitrogen Organic nitrogen is converted to inorganic nitrogen (NH3) When pH<7.5, converted rapidly to NH4 Example: Urea NH3 + 2 CO2

Immobilization The opposite of mineralization Happens when nitrogen is limiting in the environment Nitrogen limitation is governed by C/N ratio C/N typical for soil microbial biomass is 20 C/N < 20 Mineralization C/N > 20 Immobilization

Nitrogen Fixation N2 N2O NH4 NO2 R-NH2 NO NO2 NO3

Nitrogen Fixation Energy intensive process : N2 + 8H+ + 8e- + 16 ATP = 2NH3 + H2 + 16ADP + 16 Pi Performed only by selected bacteria and actinomycetes Performed in nitrogen fixing crops (ex: soybeans)

Microorganisms fixing Azobacter Beijerinckia Azospirillum Clostridium Cyanobacteria Require the enzyme nitrogenase Inhibited by oxygen Inhibited by ammonia (end product)

Rates of Nitrogen Fixation N2 fixing system Nitrogen Fixation (kg N/hect/year) Rhizobium-legume 200-300 Cyanobacteria- moss 30-40 Rhizosphere associations 2-25 Free- living 1-2 Rhizobium-legume Cynaobacteria-moss Rhizosphere associations Free-living

Immobilization is the opposite of which process in the cycle? A) Mineralization B) Nitrification C) Immobilization D) Nitrogen Fixation E) Denitrification What process takes place when nitrogen is limiting in the environment? A) Mineralization B) Nitrification C) Immobilization D) Nitrogen Fixation E) Denitrification Which has the highest rate of nitrogen fixation? A) Rhizobium-legume B) Cynaobacteria-moss C) Rhizosphere associations D) Free-living E) Azobacter Mineralization Immobilization Rhizobium-legume

Applications to wetlands Occur in overlying waters Aerobic soil Anaerobic soil Oxidized rhizosphere Leaf or stem surfaces of plants

Bacterial Fixation Occurs mostly in salt marshes Is absent from low pH peat of northern bogs Cyanobacteria found in waterlogged soils

Nitrification N2 N2O NH4 NO2 R-NH2 NO NO2 NO3

Nitrification Two step reactions that occur together : 1rst step catalyzed by Nitrosomonas 2 NH4+ + 3 O2  2 NO2- +2 H2O+ 4 H+ 2nd step catalyzed by Nitrobacter 2 NO2- + O2  2 NO3-

If pH < 6.0  rate is slowed If pH < 4.5  reaction is inhibited Optimal pH is between 6.6-8.0 If pH < 6.0  rate is slowed If pH < 4.5  reaction is inhibited In which type of wetlands do you thing Nitrification occurs?

Denitrification N2 N2O NH4 NO2 R-NH2 NO NO2 NO3

Denitrification Removes a limiting nutrient from the environment 4NO3- + C6H12O6 2N2 + 6 H20 Inhibited by O2 Not inhibited by ammonia Microbial reaction Nitrate is the terminal electron acceptor

Looking at the Nitrogen cycle through the eye of NH4

Denitrication is inhibited by A) NH3 B) NH4+ C) NO2- D) O2 The second step of Nitrification is catalyzed by A) Nitrosomonas B) Clostridium C) Azobacter D) Nitrobacter E) Beijerinckia Which pH is within the optimal range for nitrication? A) 1.5 B) 4.6 C) 7.1 D) 8.7 E) 10.9 D) O2 D) Nitorbacter C) 7.1

Surface water Low [NH4] Oxidized layer Biodegradation Reduced soil layer Slow Diffusion C/N <20 C/N >20 [NH4] HIGH

Surface water nitrification Low [NH4] Oxidized layer [NO3] high Reduced soil layer Slow Diffusion [NH4] HIGH

N2 Surface water Oxidized layer [NO3] high Leaching Reduced soil layer [NO3] Low Denitrification

PHOSPHOROUS CYCLE

HUMAN IMPACTS TO PHOSPHOROUS CYCLE Humans mine LARGE quantities of phosphate rock to use in commercial fertilizers and detergents. Phosphorous is NOT found as a gas, only as a solid in the earth’s crust. It takes millions to hundreds of millions of years to replenish. Phosphorous is held in the tissue of the trees and vegetation, not in the soil and as we deforest the land, we remove the ability for phosphorous to replenish globally in ecosystems. Cultural eutrophication – ad excess phosphate to aquatic ecosystems in runoff of animal wastes from livestock feedlots, runoff of commercial phosphate fertilizers fro cropland, and discharge of municipal sewage.

IMPORTANCE OF PHOSPHOROUS CYCLE 1.Phosphorous is an essential nutrient of both plants and animals. 2. It is part of DNA molecules which carry genetic information. 3. It is part of ATP and ADP) that store chemical energy for use by organisms in cellular respiration. 4. Forms phospholipids in cell membranes of plants and animal cells. 5. Forms bones, teeth, and shells of animals as calcium phosphate compounds.

The Oxygen cycle

1. The Phosphorus Cycle takes A. Short time B 1. The Phosphorus Cycle takes A. Short time B. 20 years to fully cycle through C. 100 years to cycle through D. Geological Timescal 2. What percentage of sulfur is emmited buy human activity? A. .01% B. 20% C. 33.3% D. 66.7% E. Over 90% 3. The vast majority of oxygen in the ecosphere is in A. Outer space B. Lithosphere C. Atmosphere D. Hydrosphere 1. D 2. c 3. b

PHOTOSYNTHESIS Photosynthesis: occurs within the chloroplasts of green plants. The photosynthetic membranes are arranged in flattened sacs called the thylakoids. 6CO2 + 12H2O C6H12O6 + 6O2 + 6H2O light (reactants) (products) Function: Chemical energy Storage for cell use

CELLULAR RESPIRATION Cellular Respiration occurs in light simultaneously with photosynthesis. It occurs in the cytoplasm and mitochondria. It is the reverse reaction of photosynthesis. Function = chemical energy release C6H12O6 + 6O2 + 6H2O 6CO2 + 12H2O+ chemical energy (reactants) (products)

Primary Productivity Connection Gross Primary Productivity (GPP) – the rate at which an ecosystem’s producers capture and store a given amount of chemical energy as biomass in a given period of time. Net Primary Productivity (NPP) – the rate at which all the plants in an ecosystem produce net useful energy; equal to the difference between energy produced through photosynthesis and energy used for cellular respiration.

“GOOD OZONE UP HIGH”

PHOTOCHEMICAL SMOG “BAD OZONE DOWN LOW”

OZONE DEPLETION

ACID DEPOSITION

CULTURAL EUTROPHICATION

Cultural Eutrophication & Anoxia Eutrophication: natural process; over 1000’s of years, lakes fill in with sediment, become marshes then dry land Cultural Eutrophication: same process, but speeded enormously by loading with “limiting nutrients” (typically P, sometimes N) Problems associated with cultural eutrophication Algal blooms Water anoxia

Works Cited http://science.pppst.com/carboncycle.html westernreservepublicmedia.org/earthmotion3/images/Carbon_Cycle.ppt clima-dods.ictp.it/d3/annalisa/ocean_sv/lecture1.ppt www.geology.wmich.edu/Koretsky/envs2150/Pcycle_1.ppt