Empirical mutation-selection phase diagram of tumor evolution.

Slides:



Advertisements
Similar presentations
Hydrogen solubility isotherms and solute susceptibility.
Advertisements

Does the effect of staying in school until age 16 depend on the BMI PGS? Bars show 2SLS point estimates of effect of staying in school until age 16 on.
The biodistribution and pharmacokinetics of [68Ga]Ga-1 in the orthotopic xenograft mice using µPET dynamic acquisitions. The biodistribution and pharmacokinetics.
Distribution of mutations in different groups of genes, in cancer with extreme ML values. Distribution of mutations in different groups of genes, in cancer.
ML criticality in clinical outcome across cancer types.
Evidence of adaptation to climate change.
Schematic representation of possible effects of different factors on systemic resilience. Schematic representation of possible effects of different factors.
The evolution of WCI for biological specificity makes organisms more evolvable. The evolution of WCI for biological specificity makes organisms more evolvable.
ERVmap reveals additional breast cancer-associated ERVs that correlate with cytolytic activity. ERVmap reveals additional breast cancer-associated ERVs.
Empirical mutation-selection phase diagram of tumor evolution.
Underlying mechanisms.
Two functional states of human CFTR
(A) Schematic diagram of TGC
Representation of the evolutionary model.
Distribution of mutations in different groups of genes, in cancer with extreme ML values. Distribution of mutations in different groups of genes, in cancer.
(A) Stereoview of the active site of IspH with bound HMBPP (Green) including coordinated water at position W1 (Gray). (A) Stereoview of the active site.
Relation of FRET change to fusion pore opening and dilation.
Fundamental epidemiological indicators.
(A) Box and whisker diagram for median lag times (difference between date of death and seizure date) of ivory specimens analyzed in this study; the number.
Patients with SLE have elevated ERV expression.
Adaptive Evolution of Gene Expression in Drosophila
Oncogenic B-Raf mutations
Conditional mutagenesis restricts the Lbx1FS mutation to specific neuronal subpopulations. Conditional mutagenesis restricts the Lbx1FS mutation to specific.
The Lbx1FS mutation causes central hypoventilation and loss of CO2 sensitivity in mice. The Lbx1FS mutation causes central hypoventilation and loss of.
Host transcriptional profiling distinguishes patients with acute LRTI (LRTI+C+M) from those with noninfectious acute respiratory illness (no-LRTI). Host.
Combined LRTI prediction metric integrating pathogen detection and host gene expression. Combined LRTI prediction metric integrating pathogen detection.
Workflow for distinguishing LRTI pathogens from commensal respiratory microbiota using an algorithmic approach. Workflow for distinguishing LRTI pathogens.
Structural overview. Structural overview. (A) Domain organization of LRRK2. The residue boundary of the WD40 domain and locations of three recurrent disease.
Prescribed forcings. Prescribed forcings. (Top) Volcanic forcing is indicated as global visible optical depth. (Middle) Solar forcing is obtained by scaling.
Cancer Evolution: No Room for Negative Selection
GC analysis of V4 feedback modulations based on LFP data.
ECOM method recovers time correlation with 2-ms precision from 219-ms imaging frames. ECOM method recovers time correlation with 2-ms precision from 219-ms.
Shock-Wave Exploration of the High-Pressure Phases of Carbon
Clonal evolution underlying leukemia progression and Richter transformation in patients with ibrutinib-relapsed CLL by Sabah Kadri, Jimmy Lee, Carrie Fitzpatrick,
Lymphocyte lineage trees produced by long-term live cell microscopy.
Sarcomere length-dependence of the M3 reflection at rest (A) and at the plateau of an isometric tetanus (B). Sarcomere length-dependence of the M3 reflection.
Sequence conservation across the Ub-binding sites of human USPs
(Upper) Blind-to-controls generalization performance: prediction accuracies observed when the classifier was trained on the auditory trials from the blind.
Clustering of residues for which PREs unaccounted for by the main state were measured. Clustering of residues for which PREs unaccounted for by the main.
Phase diagrams from experiments for (A) and (B) metronome(s) per swing and from numerical simulations with metronomes (C) with metronome frequency f vs.
Acquisition of eyelid CRs during peripheral (vibrissae) followed by central (S1 areas for vibrissae or hind limb) CS, or vice versa. Acquisition of eyelid.
Structure of STAT6CF and N4 site DNA complex.
Crystal structure of STAT6CF-N3 complex and its comparison with STAT6CF-N4 complex structure. Crystal structure of STAT6CF-N3 complex and its comparison.
Dissection of oligoclonality.
The positive (blue) and negative (red) electrostatic potential isosurfaces [obtained using APBS (61) and traced in PyMol (62) at 0.7 kT/e] of cytP450cam.
Landscape of genomic alterations in 444 tumors from 429 patients with mCRPC. Landscape of genomic alterations in 444 tumors from 429 patients with mCRPC.
Temporal order of mutational processes during cancer evolution.
bHLH-PAS protein family structure and phylogeny.
Schematic representation of our random walk model with environmental state-dependent dynamics. Schematic representation of our random walk model with environmental.
Chimeras emerge with intermediate spring rate κ in a “competition” zone between two fully synchronous modes. Chimeras emerge with intermediate spring rate.
Quantitative analysis of CR evolution through conditioning sessions for the four experimental groups. Quantitative analysis of CR evolution through conditioning.
Coupling to heterotrimers with C-terminal Gα subunit chimeras.
Dynamics of the model. Dynamics of the model. (A) Snapshot of a simulation. At this time, the population has adapted to the drug concentrations in compartments.
Median and likely range (17th–83rd percentile as used in the AR5) estimates of the ice sheet SLR contributions for different temperature scenarios and.
Quantum repeater scheme from refs. 13 and 14 (CTSL scheme).
(A–F) FRET provides evidence for compaction.
Heterozygosity, Tajima’s D, and FST values plotted against the putative selective sweep signatures (horizontal color blocks) along chromosomal arms 2R.
(A) Spatial distribution of plague spread during the Third Pandemic.
(A) X-ray diffraction powder pattern of (Top) SAC (solvent-assisted crystallized), (Middle) LG, and (Bottom) SG diF-TEG ADT spin-coated films at 153 K.
Volume 18, Issue 3, Pages (March 2011)
Cancer mutations in enriched RBP motifs.
Correlation between Ti→jS(r) and Ti→jM(r) for pair of locations (gray dots) separated by a distance of (A) r=1 km, (B) r=5 km, (C) r=20 km, (D) r=50 km,
(a) Pattern of UWHBs, represented as green segments joining paired α-carbons, for human Hb β-subunit. (a) Pattern of UWHBs, represented as green segments.
Fig. 1 Phase diagram and FS topologies.
Emergence of resonances and prediction of distinct network responses
A, Top inhibitors of Ba/F3 transformed with CD74–ROS1, color coded by clinical development status: FDA-approved (green), phase III (yellow), phase II (blue),
Fig. 6 Global phase diagram.
Molecular heterogeneity can drive mixed response and treatment failure in EGC. A, PET images from Patient #4 obtained before treatment and upon disease.
Global mutational landscape of the 170 lung adenocarcinoma patients (discovery cohort). Global mutational landscape of the 170 lung adenocarcinoma patients.
Fig. 2 Comparison of the observed DRs and the estimates by the VR model and FL. Comparison of the observed DRs and the estimates by the VR model and FL.
Presentation transcript:

Empirical mutation-selection phase diagram of tumor evolution. Empirical mutation-selection phase diagram of tumor evolution. (A) Mutation-selection empirical diagram for all analyzed cancers (gray) and selected cancer types (color-coded) that show distinct evolutionary regimes depending on the ML. (B) A schematic conceptual depiction of the emerging fitness landscape of tumors as a function of the ML (Top) and selection (Bottom). Dashed curves are theoretical, and solid curves are observed. Down-triangles (green) indicate purifying selection and up-triangles (orange) positive selection. The gray ovals show the critical area. Erez Persi et al. PNAS doi:10.1073/pnas.1807256115 ©2018 by National Academy of Sciences