Randomness Testing in DNA Samples

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Presentation transcript:

Randomness Testing in DNA Samples Laura Jean Champagne Advisor: Gary Davis

Abstract This project examines the randomization of DNA sequences based on current genome sequencing projects. Using computational programs, mainly R and MATLAB, different mathematical tests for randomness are applied to DNA sequences in an attempt to find patterns or other unique properties. DNA sequences used are obtained from the Virtual Library of Genetics.

AMELY & AMELX Amelogenin (tooth enamel protein) Gender Specific

Data – GenBank

Data

Correlagram

Correlagram AMELX AMELY

DNA Sequences

Histogram AMELX AMELY

Histogram of Amino Acids AMELX AMELY

Why Bother? Synthetic life Gender differences

Goals Relative Frequency

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