Galaxy-P for…? P for ? Possibilities? Palaeoanthropology? Padmasana?

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Presentation transcript:

Galaxy-P for…? P for ? Possibilities? Palaeoanthropology? Padmasana? Pyschology? Psephology? Phrontistery?

Galaxy-P for Proteomics http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1147079

Galaxy-P Challenges Individual preferences for workflows Complex workflows Windows software Multiple commercial and open-source tools. Software dependencies.

Galaxy-P Opportunities Step by step approach for complex workflows Exploring creative workflows for emerging fields in proteomics Integrate command-line Windows software Project-based, user-developer team-based approach. Visualization Cloud computing

Galaxy-P for… (What we are most excited about) Its ability to share workflows and not just raw data. Developing emerging fields in proteomics such as proteogenomics, spectral library searches, label-free quantitation, metaproteomics, etc. Post-identification analysis (Pathway analysis, statistical analysis)… Systems Biology : Integration (or combined study) of proteomic data with genomic or transcriptomic datasets... Visualizing, accessing and annotating data (mzmine, mzserver, Slice etc.)… Magnet for open-source software and workflows… Addressing workflows for emerging mass spectrometers…

Questions? / Interest? pratik@msi.umn.edu chilton@msi.umn.edu tgriffin@umn.edu