Chapter 20 Opener Immune complexity in an invertebrate

Slides:



Advertisements
Similar presentations
Evolution and proteins You can see the effects of evolution, not only in the whole organism, but also in its molecules - DNA and protein For a mutation.
Advertisements

The Organization of Cellular Genomes Complexity of Genomes Chromosomes and Chromatin Sequences of Genomes Bioinformatics As we have discussed for the last.
Phylogenetics workshop: Protein sequence phylogeny week 2 Darren Soanes.
Chapter 5: History of Life on Earth. Dates of origins 1. Everything (Universe):14 Bya 2. Solar System (Earth):4.6 Bya Conservative estimates 3. Prokaryotic.
Comparative genomics Joachim Bargsten February 2012.
Copyright, ©, 2002, John Wiley & Sons, Inc.,Karp/CELL & MOLECULAR BIOLOGY 3E The Stability of the Genome Duplication, Deletion, Transposition.
BIOE 109 Summer 2009 Lecture 4- Part I Mutation and genetic variation.
Evolution of Genes and Genomes
1 Evolution of Genomes and Developmental Mechanisms Chapter 24.
Gene transfer Organismal tree: species B species A species C species D Gene Transfer seq. from B seq. from A seq. from C seq. from D molecular tree: speciation.
The diversity of genomes and the tree of life
Chapter 5 Genome Sequences and Gene Numbers. 5.1Introduction  Genome size vary from approximately 470 genes for Mycoplasma genitalium to 25,000 for human.
Genome Organization and Evolution. Assignment For 2/24/04 Read: Lesk, Chapter 2 Exercises 2.1, 2.5, 2.7, p 110 Problem 2.2, p 112 Weblems 2.4, 2.7, pp.
Genomics Lecture 8 By Ms. Shumaila Azam. 2 Genome Evolution “Genomes are more than instruction books for building and maintaining an organism; they also.
Lecture 25 - Phylogeny Based on Chapter 23 - Molecular Evolution Copyright © 2010 Pearson Education Inc.
Genetics: From Genes to Genomes
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Studying genetic mechanisms of change can provide insight into large-scale.
1 Genome Evolution Chapter Introduction Genomes contain the raw material for evolution; Comparing whole genomes enhances – Our ability to understand.
Evolution of multigene families
Chapter 24: Molecular and Genomic Evolution CHAPTER 24 Molecular and Genomic Evolution.
Bioinformatic Tools for Comparative Genomics of Vectors Comparative Genomics.
Molecular and Genomic Evolution Getting at the Gene Pool.
Cédric Notredame (08/12/2015) Molecular Evolution Cédric Notredame.
Table 8.3 & Alberts Fig.1.38 EVOLUTION OF GENOMES C-value paradox: - in certain cases, lack of correlation between morphological complexity and genome.
Today Elements of complex genomes Protein domains and exon shuffling
Genetica per Scienze Naturali a.a prof S. Presciuttini Gene duplication Gene duplication appears to occur at high rates in all evolutionary lineages.
Phylogeny & Systematics
Chapter 3 The Interrupted Gene.
What you need to know: The major goals of the Human Genome Project How prokaryotic genomes compare to eukaryotic genomes. The activity and role of transposable.
Evolution at the Molecular Level. Outline Evolution of genomes Evolution of genomes Review of various types and effects of mutations Review of various.
Evolutionary change involves genetic change   Phenotype   Genotype Study of evolution of macromolecules - nature of changes (in DNA, protein) & their.
Evolution at the Molecular Level. Outline Evolution of genomes Evolution of genomes Review of various types and effects of mutations Review of various.
Integrated Systems Biology PowerPoint Slides for Chapter 7: Evolution at the Cellular Level by A. Malcolm Campbell, Laurie J. Heyer, and Chris Paradise.
Eukaryotic genes are interrupted by large introns. In eukaryotes, repeated sequences characterize great amounts of noncoding DNA. Bacteria have compact.
Genetic Code and Interrupted Gene Chapter 4. Genetic Code and Interrupted Gene Aala A. Abulfaraj.
Primary Mechanism of Duplication : Unequal Crossing Over Crossing over Between Daughter Strands Addition (duplication) Deletion (tandom duplications)
Phylogeny and the Tree of Life
Phylogeny and the Tree of Life
Evolution of eukaryotic genomes
Evolution of gene function
Genetics and Evolutionary Biology
An organism’s genome is the full set of genes it contains.
Genomes and Their Evolution
Evolution of Genes with Novel Functions
Genomes and their evolution
Genomes and their evolution
Genome Projects Maps Human Genome Mapping Human Genome Sequencing
Convergent Evolution: Gene Sharing by Eukaryotic Plant Pathogens
Genomes and Their Evolution
Fig Figure 21.1 What genomic information makes a human or chimpanzee?
Chapter 26 Phylogeny and the Tree of Life
Genomes and Their Evolution
Genomes and Their Evolution
Evolution of eukaryote genomes
Organization of the human genome
Varodom Charoensawan, Derek Wilson, Sarah A. Teichmann 
Chapter 4 The Interrupted Gene.
Phylogeny and Systematics
The Evolution of Adaptive Immune Systems
Gene structures, positions of mutations, and protein domains of PRP18 paralogs in Arabidopsis. Gene structures, positions of mutations, and protein domains.
Evolutionary genetics
Phylogenics & Molecular Clocks
Genomes and Their Evolution
Genomes and Their Evolution
Genomes and Their Evolution
Genomes and Their Evolution
Genomes and Their Evolution
Volume 21, Issue 23, Pages (December 2011)
Phylogeny and the Tree of Life
Presentation transcript:

Chapter 20 Opener Immune complexity in an invertebrate Evolution-2e-Chapter-20-Opener.jpg

Figure 20.1 Continual acquisition of microRNA families through metazoan evolution Evolution-2e-Fig-20-01-0.jpg

Figure 20.2 Phylogenetic distribution of introns Evolution-2e-Fig-20-02-0.jpg

Figure 20.2 Phylogenetic distribution of introns (Part 1) Evolution-2e-Fig-20-02-1.jpg

Figure 20.2 Phylogenetic distribution of introns (Part 2) Evolution-2e-Fig-20-02-2.jpg

Figure 20.3 Conservation and evolution of a novel SINE in vertebrates Evolution-2e-Fig-20-03-0.jpg

Figure 20.3 Conservation and evolution of a novel SINE in vertebrates (Part 1) Evolution-2e-Fig-20-03-1.jpg

Figure 20.3 Conservation and evolution of a novel SINE in vertebrates (Part 2) Evolution-2e-Fig-20-03-2.jpg

Figure 20.4 Age distribution of retroelements in the human genome Evolution-2e-Fig-20-04-0.jpg

Figure 20.5 Immune receptor molecules in the genome of the purple sea urchin (Strongylocentrotus purpuratus) Evolution-2e-Fig-20-05-0.jpg

Figure 20.6 Extent of codon bias in 12 Drosophila species Evolution-2e-Fig-20-06-0.jpg

Figure 20.6 Extent of codon bias in 12 Drosophila species Evolution-2e-Fig-20-06-0R.jpg

Figure 20.7 Relative rates of nonsynonymous substitution in protein-coding genes of the 12 Drosophila species with fully sequenced genomes Evolution-2e-Fig-20-07-0.jpg

Figure 20.8 A gene tree for lysozyme provides phylogenetic evidence for molecular convergence in primate, ruminant, and avian lysozymes Evolution-2e-Fig-20-08-0.jpg

Figure 20.9 Phylogenetic evidence for lateral gene transfer (LGT) from Archaea to the eukaryotic protist Entamoeba histolytica Evolution-2e-Fig-20-09-0.jpg

Figure 20.9 Phylogenetic evidence for lateral gene transfer (LGT) from Archaea to the eukaryotic protist Entamoeba histolytica Evolution-2e-Fig-20-09-0R.jpg

Figure 20.10 A polytene chromosome of Drosophila ananassae (red) with evidence of integration of a laterally transferred gene from the intracellular symbiont Wolbachia (green) Evolution-2e-Fig-20-10-0.jpg

Figure 20.11 Origin of a new yeast gene from noncoding DNA Evolution-2e-Fig-20-11-0.jpg

Figure 20.12 Evolution and conservation of domains in diverse proteins Evolution-2e-Fig-20-12-0.jpg

Figure 20.13 Protein domains bind antigens in human immunoglobulin Evolution-2e-Fig-20-13-0.jpg

Figure 20.13 Protein domains bind antigens in human immunoglobulin (Part 1) Evolution-2e-Fig-20-13-1.jpg

Figure 20.13 Protein domains bind antigens in human immunoglobulin (Part 2) Evolution-2e-Fig-20-13-2.jpg

Figure 20.14 Origin of a new Drosophila gene, jingwei, via retrotransposition of a pre-existing gene into an intron of Ymp (yellow-emperor) to recruit new exons Evolution-2e-Fig-20-14-0.jpg

Figure 20.15 The evolution of AFGP genes of Antarctic notothenioid fishes Evolution-2e-Fig-20-15-0.jpg

Figure 20.15 The evolution of AFGP genes of Antarctic notothenioid fishes (Part 1) Evolution-2e-Fig-20-15-1.jpg

Figure 20.15 The evolution of AFGP genes of Antarctic notothenioid fishes (Part 2) Evolution-2e-Fig-20-15-2.jpg

Figure 20.16 Amplification of the DUF1220 domain in the human lineage Evolution-2e-Fig-20-16-0.jpg

Figure 20.16 Amplification of the DUF1220 domain in the human lineage (Part 1) Evolution-2e-Fig-20-16-1.jpg

Figure 20.16 Amplification of the DUF1220 domain in the human lineage (Part 2) Evolution-2e-Fig-20-16-2.jpg

Figure 20.17 Distribution of the number of paralogs in the complete genomes of five species of yeast Evolution-2e-Fig-20-17-0.jpg

Figure 20.18 Ancient origin of cadherin genes as revealed in the genome of the choanoflagellate Monosiga brevicollis Evolution-2e-Fig-20-18-0.jpg

Figure 20.18 Ancient origin of cadherin genes as revealed in the genome of the choanoflagellate Monosiga brevicollis (Part 1) Evolution-2e-Fig-20-18-1.jpg

Figure 20.18 Ancient origin of cadherin genes as revealed in the genome of the choanoflagellate Monosiga brevicollis (Part 2) Evolution-2e-Fig-20-18-2.jpg

Figure 20.19 Use of age distribution of gene duplication events to infer whole-genome duplications Evolution-2e-Fig-20-19-0.jpg

Figure 20.20 Block duplication Evolution-2e-Fig-20-20-0.jpg

Figure 20.20 Block duplication Evolution-2e-Fig-20-20-0R.jpg

Figure 20.21 Evolution of species-specific differences in coevolving lysin and VERL proteins Evolution-2e-Fig-20-21-0.jpg

Figure 20.21 Evolution of species-specific differences in coevolving lysin and VERL proteins (Part 1) Evolution-2e-Fig-20-21-1.jpg

Figure 20.21 Evolution of species-specific differences in coevolving lysin and VERL proteins (Part 2) Evolution-2e-Fig-20-21-2.jpg

Figure 20.22 Evidence for localized gene conversion and concerted evolution in the primate globin gene family Evolution-2e-Fig-20-22-0.jpg

Figure 20.23 Phylogenetic consequences of duplication, speciation, and gene conversion in gene families Evolution-2e-Fig-20-23-0.jpg

Figure 20.24 The DDC model of gene duplication as illustrated by Hox genes Evolution-2e-Fig-20-24-0.jpg

Figure 20.24 The DDC model of gene duplication as illustrated by Hox genes (Part 1) Evolution-2e-Fig-20-24-1.jpg

Figure 20.24 The DDC model of gene duplication as illustrated by Hox genes (Part 2) Evolution-2e-Fig-20-24-2.jpg