NoRC regulates telomeric heterochromatin.

Slides:



Advertisements
Similar presentations
1A IP/ Input Figure 1: E47 is present on tRNA genes 1B IgG TFIIB E47 Brf1 WB: Brf1 Input IP A) IP/Input enrichment of E47 at 6 active tRNA genes and one.
Advertisements

Repression of COUP-TFI Improves Bone Marrow-Derived Mesenchymal Stem Cell Differentiation into Insulin-Producing Cells  Tao Zhang, Xiao-Hang Li, Dian-Bao.
Survivin is a determining factor for mitotic localization of the chromosome passenger complex. Survivin is a determining factor for mitotic localization.
Volume 27, Issue 6, Pages (September 2007)
Colocalization of the human trimethylguanosine synthase 1 and survival of motor neuron proteins. Colocalization of the human trimethylguanosine synthase.
Yeast Tgl3p expressed in HeLa cells localizes to lipid droplets.
SERCA2 is a functional adaptor for the alternative toll‐like receptor 9 (TLR9) signalling in cardiomyocytes Co‐immunoprecipitated TLR9 with SERCA2 antibody.
Desmoplakin is a direct transcriptional target of Bcl11b.
DNMT3B Overexpression by Deregulation of FOXO3a-Mediated Transcription Repression and MDM2 Overexpression in Lung Cancer  Yi-Chieh Yang, MS, Yen-An Tang,
Volume 55, Issue 1, Pages (July 2014)
HDAC1 is an integral component of the Microprocessor complex and modifies its affinity to primary miRNA transcripts. HDAC1 is an integral component of.
Overexpression of RNase H1 decreases the induction of phosphorylated H2AX in post‐mitotic cells in response to topoisomerase 1 cleavage complexes. Overexpression.
NM1 localizes in nucleoli and is required for Pol I transcription.
Interaction with Snail1 is required for LSD1 recruitment to the E‐cadherin promoter in vivo. Interaction with Snail1 is required for LSD1 recruitment to.
Ubiquitination of Drp1 by MARCH‐V.
RNA charging levels before and after starvation.
Both NM1 and the WSTF complex stimulate Pol I transcription.
Volume 13, Issue 3, Pages (October 2015)
NoRC affects centromere function.
Volume 8, Issue 2, Pages (July 2014)
Jan-Philipp Mallm, Karsten Rippe  Cell Reports 
Feng Zhang, Jiazhong Shi, Chunjing Bian, Xiaochun Yu  Cell Reports 
P63 Transcription Factor Regulates Nuclear Shape and Expression of Nuclear Envelope-Associated Genes in Epidermal Keratinocytes  Valentina Rapisarda,
Beclin‐1 depletion reduces targeting of several outer kinetochore proteins. Beclin‐1 depletion reduces targeting of several outer kinetochore proteins.
Volume 23, Issue 3, Pages (February 2013)
The de‐ubiquitinase OTUB1 interacts with the RAS GTPases
Elif Nur Firat-Karalar, Navin Rauniyar, John R. Yates, Tim Stearns 
Endogenous MOSPD2 is recruited to interorganelle contact sites by FFAT‐containing proteins Endogenous MOSPD2 is recruited to interorganelle contact sites.
Volume 43, Issue 5, Pages (September 2011)
Volume 27, Issue 6, Pages (September 2007)
Minchul Kim, Taekhoon Kim, Randy L. Johnson, Dae-Sik Lim  Cell Reports 
Volume 54, Issue 4, Pages (May 2014)
Histone deacetylase 1 protein depletion affects general histone acetylation and specific gene expression. Histone deacetylase 1 protein depletion affects.
Volume 66, Issue 4, Pages e5 (May 2017)
Knockdown of DAO inhibits DNA damage–induced senescence.
Human ELAV protein HuR binds miRNA in Starved cells and is necessary for extracellular export of miRNA Human ELAV protein HuR binds miRNA in Starved cells.
The ERK pathway mediates the effect of EGF on LIMT, which normally inhibits mammary cell migration and invasion The ERK pathway mediates the effect of.
Volume 5, Issue 5, Pages (November 2015)
Volume 2, Issue 6, Pages (December 2012)
NDP52 promotes CHIKV infection in a species‐specific manner.
Ramiro E. Verdun, Laure Crabbe, Candy Haggblom, Jan Karlseder 
NoRC suppresses recombination between telomeric repeats.
An RNAi Screen of Chromatin Proteins Identifies Tip60-p400 as a Regulator of Embryonic Stem Cell Identity  Thomas G. Fazzio, Jason T. Huff, Barbara Panning 
Cbl protein levels in ago3, twin, and armi mutant GSCs
LFA-1 is present in cytosolic clusters similar to those containing RhoB and tubulin in migrating T lymphocytes, and reducing RhoB abundance impairs the.
Volume 3, Issue 3, Pages (March 2013)
Limited transcriptomic changes upon HOTAIR RNA overexpression in MDA‐MB‐231 breast cancer cells Limited transcriptomic changes upon HOTAIR RNA overexpression.
Telomeric Noncoding RNA TERRA Is Induced by Telomere Shortening to Nucleate Telomerase Molecules at Short Telomeres  Emilio Cusanelli, Carmina Angelica Perez.
Mutant and Wild-Type Tumor Suppressor p53 Induces p300 Autoacetylation
R1441G‐LRRK2 co‐localizes with Rab10 in the periphery and Rab8 near the nucleus R1441G‐LRRK2 co‐localizes with Rab10 in the periphery and Rab8 near the.
Volume 23, Issue 5, Pages (May 2013)
ZBTB48 is required for MTFP1 expression
Volume 4, Issue 5, Pages (September 2013)
SETDB1-dependent heterochromatin stimulates alternative lengthening of telomeres by Mathilde Gauchier, Sophie Kan, Amandine Barral, Sandrine Sauzet, Eneritz.
Activation of Drp1 by E2F5‐Drp1 complex enhances HPV‐E7/ceramide‐mediated lethal mitophagy Activation of Drp1 by E2F5‐Drp1 complex enhances HPV‐E7/ceramide‐mediated.
Dnmt2 mutants show delayed immune responses and Dnmt2–EGFP relocalizes and interacts with DCV RNA during infection. Dnmt2 mutants show delayed immune responses.
NLK positively regulates YAP activity in physiological settings
Defective RAB1B-related megakaryocytic ER-to-Golgi transport in RUNX1 haplodeficiency: impact on von Willebrand factor by Gauthami Jalagadugula, Lawrence.
Volume 17, Issue 3, Pages (October 2016)
The PHD Finger/Bromodomain of NoRC Interacts with Acetylated Histone H4K16 and Is Sufficient for rDNA Silencing  Yonggang Zhou, Ingrid Grummt  Current.
Intergenic Transcripts Regulate the Epigenetic State of rRNA Genes
BRG1 interacts with RAD52 and regulates its accumulation at DSB sites during homologous recombination repair. BRG1 interacts with RAD52 and regulates its.
Volume 25, Issue 11, Pages e5 (December 2018)
GOLPH3 interacts with COG complex proteins.
Chk1 and 14‐3‐3 proteins inhibit atypical E2Fs to prevent a permanent cell cycle arrest Experimental procedures of the SILAC assay to identify binding.
Volume 55, Issue 1, Pages (July 2014)
Volume 11, Issue 3, Pages (September 2012)
Volume 65, Issue 5, Pages e4 (March 2017)
The interaction of PALB2 with BRCA1 is required for the assembly of PALB2, BRCA2, and RAD51 nuclear foci. The interaction of PALB2 with BRCA1 is required.
Fig. 5 hTERT promotion of Hsp70-1 telomere localization is dependent on Apollo and assists the telomere protective function of Apollo. hTERT promotion.
Presentation transcript:

NoRC regulates telomeric heterochromatin. NoRC regulates telomeric heterochromatin. (A) TIP5 localizes at telomeres. Left: Z‐projection of a deconvolved image of a representative U2OS cell stained with α‐TIP5 antibody (red) followed by Q‐FISH with a telomere‐specific PNA probe (green). The same nucleus depicting colocalization of TIP5 with telomeres (white spots) is shown below. Middle: a representative U2OS cell immunostained with α‐TIP5 (red) and α‐TRF2 (green) antibodies is shown. Colocalization of TIP5 and TRF2 is depicted in yellow. Right: quantification of telomeres colocalizing with TIP5 in a representative experiment (N=4), each dot on the plot represents one cell (unpaired t‐test, P‐value ***<0.001, n=45). Red bars indicate mean values. Scale bars, 5 μm. (B) TIP5 is associated with telomeres. ChIPs in U2OS cells monitoring TIP5, TRF2 and Pol I at telomeres. Telomere DNA was assayed by dot hybridization with a telomere‐specific riboprobe. Data are normalized to input values. Error bars represent s.e.m. (n=3). (C) TIP5 interacts with chromatin modifiers. Co‐IP experiments showing association of Flag‐tagged TIP5 with GFP‐tagged Suv4‐20h2 and SIRT6. Non‐adjacent lanes in the original blots are indicated by dotted lines. Co‐IP lanes exposed longer than the input lanes are marked with an asterisk. (D) TIP5 triggers heterochromatic histone marks at subtelomeres and telomeres. ChIP of H4K20me3, H3K9me3 and H4Ac at T and sT after overexpression of TIP5 (n=5, left panels) and after knockdown of TIP5 (n=3, right panels) in U2OS cells. ChIPs from cells transfected with empty vector or control siRNA were used as a reference (ctrl=1). Data are normalized to input values. Error bars represent s.e.m. (E) TIP5 recruits histone‐modifying enzymes to telomeres and subtelomeres. ChIPs showing binding of ectopic Suv4‐20h2 and SIRT6 to telomeres and subtelomeres after overexpression (left panels) and knockdown of TIP5 (right panels) in NIH3T3/ER‐Suv4‐20h2 cells. ChIPs from cells transfected with empty vector or control siRNA, respectively, were used as a reference (ctrl=1). Data are normalized to input values. Error bars represent s.e.m. (n=3). (F) TIP5 interacts with TRF2. Co‐IP experiment showing association of Flag‐tagged TIP5 with GFP‐tagged TRF2. Co‐IP lanes exposed longer than the input lanes are marked with an asterisk. (G) NoRC interacts with TERRA in vivo. GFP‐tagged proteins were immunoprecipitated from HEK293T cells and associated RNAs were quantified by dot blot (TERRA) or qPCR (U2 snRNA). Data represent fold excess of precipitated RNA (normalized to input) in cells expressing TIP5 over control cells. Error bars represent s.e.m. (n=3). ChIP, chromatin immunoprecipitation; Co‐IP, co‐immunoprecipitation; GFP, green fluorescent protein; NoRC, nucleolar remodelling complex; Q‐FISH, quantitative fluorescence in situ hybridization; siRNA, short interfering RNA; snRNA, small nuclear RNA; sT, subtelomeres; T, telomeres; TERRA, telomeric repeat‐containing RNA. Anna Postepska‐Igielska et al. EMBO Rep. 2013;14:704-710 © as stated in the article, figure or figure legend