CRISPR/Cas targeting of RFP in C. albicans.

Slides:



Advertisements
Similar presentations
“CRISPR genome editing” Precise gene regulation/modification using the simple CRISPR/Cas9 system Thank you. Nucleeases will be used as a new tool that.
Advertisements

National Postdoc Appreciation Week
WORKSHOP: CRISPR in insects
Targeted Disruption of V600E-Mutant BRAF Gene by CRISPR-Cpf1
2470 bp 1891 bp WT bp 2314 bp A B Fig. S1. Verification with PCR amplification of the.
Figure 1. Strategy of CRISPR/Cas9-mediated genome editing in S
Alexander Kena, Heng Ye, Jiuhuan Feng, Xingyou Gu
PCR genotype analysis to determine RNP-mediated knockout efficiency in C. lusitaniae. PCR genotype analysis to determine RNP-mediated knockout efficiency.
PCR genotype analysis. PCR genotype analysis. (A) Primer pairs for detection of deletion alleles. The designation YFG refers to any of the genes UME6,
Dan Ding, Kaiyuan Chen, Yuedan Chen, Hong Li, Kabin Xie 
In vivo optimization of the tagging approach using the Act5C model locus and flow cytometry-based quantification of the Act5C-GFP tagging success. In vivo.
High efficiency of gene deletion in all tested genetic backgrounds of A. fumigatus. High efficiency of gene deletion in all tested genetic backgrounds.
CRISPR/Cas9-mediated genome editing of PML in human cell lines.
Strategy for CRISPR/Cas9-mediated genome editing in ΔEx50 mice
by Luciano A. Marraffini, and Erik J. Sontheimer
Molecular Therapy - Methods & Clinical Development
Molecular Therapy - Nucleic Acids
Molecular Therapy - Nucleic Acids
DNSP16 mutation attenuates the virulence of a mouse-adapted MERS-CoV strain. dNSP16 mutation attenuates the virulence of a mouse-adapted MERS-CoV strain.
USH2A Gene Editing Using the CRISPR System
Volume 7, Issue 3, Pages (September 2016)
Guide RNA Functional Modules Direct Cas9 Activity and Orthogonality
Andrew R. Bassett, Charlotte Tibbit, Chris P. Ponting, Ji-Long Liu 
Synthetic perturbation of DE and DV genes.
Unified Solo vectors for mutagenesis in C. albicans.
RAD51 is essential for L. donovani.
Volume 69, Issue 1, Pages e3 (January 2018)
RFP CRISPR mutagenesis as a function of sgRNA delivery.
Zongliang Gao, Elena Herrera-Carrillo, Ben Berkhout 
Volume 10, Issue 2, Pages (February 2018)
WRKY20 dual sgRNA approach.
Volume 1, Issue 1, Pages (July 2015)
Volume 25, Issue 11, Pages (November 2017)
William T. Hendriks, Curtis R. Warren, Chad A. Cowan  Cell Stem Cell 
Volume 25, Issue 2, Pages (February 2017)
Molecular Therapy - Nucleic Acids
Tagging of the endogenous Py03652 gene with the gfp gene in Plasmodium yoelii. Tagging of the endogenous Py03652 gene with the gfp gene in Plasmodium yoelii.
Volume 17, Issue 5, Pages (October 2016)
Figure 1. Ability of fluconazole to improve survival of G
Southern blot analysis of ΔpksP mutant generated in the Af293 background. Southern blot analysis of ΔpksP mutant generated in the Af293 background. (A)
Efficient CRISPR mutagenesis in C. glabrata.
Deletion of the multicopy A2 family genes and increased efficiency through coselection for parasites with CRISPR-Cas9 activity. Deletion of the multicopy.
Generation of heterozygous mutations with the CRISPR-Cas9 system.
Ciaran M Lee, Thomas J Cradick, Gang Bao  Molecular Therapy 
Mutation in pycr1a exon 3 disrupts predicted exonic splicing enhancers
CRISPR-Cas9- and AAV-mediated TCR replacement.
Natalay Kouprina, Vladimir Larionov 
Alessandro Bianchi, Simona Negrini, David Shore  Molecular Cell 
CRISPR/Cas9: Transcending the Reality of Genome Editing
Fig. 4 Gene disruption via chip.
Volume 49, Issue 5, Pages (March 2013)
Editing and reconstitution of CPAR2_
Strategy for marker recycling through CRISPR-Cas9-induced marker excision. Strategy for marker recycling through CRISPR-Cas9-induced marker excision. Consider.
The two-plasmid CRISPRi-system.
Editing of ADE2 in C. metapsilosis.
Targeted chromosomal translocations generated by targeting sites from two different chromosomes simultaneously. Targeted chromosomal translocations generated.
The pCT-tRNA plasmid system for gene editing in C. tropicalis.
dCas9-mediated repression of transcription.
Recombination of a Cas9-created DNA fragment with and without end repair. Recombination of a Cas9-created DNA fragment with and without end repair. (A)
Fig. 1 Exon 44–deleted DMD patient iPSC-derived cardiomyocytes express dystrophin after CRISPR-Cas9–mediated genome editing. Exon 44–deleted DMD patient.
Construction of sgRNA expression cassette.
Genotype analysis of transient CRISPR system transformants.
CRISPRi repression with dCas9-repressor fusion constructs.
Transient CRISPR-Cas9 system.
Production of ade2Δ/ade2Δ mutants by the Candida CRISPR system.
Volume 10, Issue 2, Pages (February 2018)
Potent and sequence-specific removal through genome targeting with CRISPR-Cas systems. Potent and sequence-specific removal through genome targeting with.
Knock-in of the rpl42-P56Q mutation using the split-ura4 system.
Fig. 3 Genome editing of the MSTN gene.
Presentation transcript:

CRISPR/Cas targeting of RFP in C. albicans. CRISPR/Cas targeting of RFP in C. albicans. (A) Yeast colonies that express functional RFP are pink and are fluorescent and can be easily distinguished from colonies that arise through CRISPR-mediated deletion of RFP, which are white and nonfluorescent. Panel B depicts the strategy for quantitating Cas9- and sgRNA-dependent cleavage of RFP. RFP (EPC1) or RFP CaCAS9 (EPC2) hemizygous strains were constructed as described in Materials and Methods. These strains were transformed with or without a donor healing fragment and a series of URA3-marked plasmids that differ in expression of an RFP sgRNA (Fig. 3). The gRNA targets a 20-bp DNA sequence proximal to the RFP PAM site at position 132. The number of white and red colonies in each transformation was counted, and cleavage efficiency was calculated as the percentage of white colonies in the population. Henry Ng, and Neta Dean mSphere 2017; doi:10.1128/mSphere.00385-16