ToxoDB ApiDB Workshop June 2006
Shotgun Sequencing Strategy genetic markers C810-A6 SAG4 Bs328 sourceDNA end sequencing of small insert plasmid library end sequencing of larger insert libraries (BAC/cosmid/plasmid) assembly scaffold physical gap sequence gaps
Sequencing Scaffolds Pinned to the Genetic Map: chromosomes 1a & 1b (Sanger) whole genome shotgun (TIGR) unmapped markers (telomeric?) mapping ambiguities Sequencing & assembly: Ian Paulsen, Neil Hall Genetic map: Chunlei Su & David Sibley Mapping: Bindu Gajria & David Roos
Improved Genetic & Physical Maps A. Khan et al (2005) Nucl. Acids Res. 33:2980
A. Khan et al (2005) Nucl. Acids Res. 33:2980