Combining Combinatorial Chemistry and Affinity Chromatography

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Presentation transcript:

Combining Combinatorial Chemistry and Affinity Chromatography Michaela Collinsová, Carmen Castro, Timothy A Garrow, Athanasios Yiotakis, Vincent Dive, Jiřı́ Jiráček  Chemistry & Biology  Volume 10, Issue 2, Pages 113-122 (February 2003) DOI: 10.1016/S1074-5521(03)00008-5

Figure 1 Electrophoretic Analysis of Fractions Obtained from Affinity Supports Ac-Xaa-DL-Ala-ψ[PO2−-CH2]-DL-Leu-Xaa′-(βAla)2-PL-PEGA (A) Electrophoretic analysis of fractions obtained from affinity supports of general formula Ac-Xaa-DL-Ala-ψ[PO2−-CH2]-DL-Leu-Xaa′-(βAla)2-PL-PEGA having Trp (W), Tyr (Y), Phe (F), or Met (M) residues in the Xaa position. RLH means rat liver homogenate (5 μg of proteins was applied) and line BL shows proteins eluted from blank resin. (B) Electrophoretic analysis of fractions obtained from affinity supports with Pro (P), Ser (S), Thr (T), Lys (K), or Arg (R) residues in the Xaa position. Fractions eluted with soluble inhibitor mixtures are marked as e.g., P-i (where mixture Ac-Pro-DL-Ala-ψ[PO2−-CH2]-DL-Leu-Xaa′-NH2 was used), fractions eluted with GnCl are marked as e.g., P-g. Fifteen μl from each fraction (400 μl) were applied on the gel. Molecular weights of standards (STD) are shown in kDa. Proteins marked P1–P20 were submitted to N-terminal sequencing. For details, see Experimental Procedures. Chemistry & Biology 2003 10, 113-122DOI: (10.1016/S1074-5521(03)00008-5)

Figure 2 Inhibition of Human Recombinant BHMT by Soluble Phosphinic Pseudopeptide Mixtures Ac-Xaa-DL-Ala-ψ[PO2−-CH2]-DL-Leu-Xaa′-NH2 Amino acids in the Xaa position are shown in a single letter code. The mixtures were tested at 250 μM concentration and the values are means of three independent measurements. For details, see Experimental Procedures. Chemistry & Biology 2003 10, 113-122DOI: (10.1016/S1074-5521(03)00008-5)

Figure 3 Inhibition of Human Recombinant BHMT by Single Soluble Phosphinic Pseudopeptides Ac-Val-DL-Ala-ψ[PO2−-CH2]-DL-Leu-Xaa′-NH2 Amino acids in the Xaa′ position are shown by single letter code. The compounds were tested at 250 μM concentration and the values are means of three independent measurements. For details, see Experimental Procedures. Chemistry & Biology 2003 10, 113-122DOI: (10.1016/S1074-5521(03)00008-5)

Figure 4 Affinity Purification of Rat Liver BHMT (A) Structure of affinity matrix used for the isolation of rat liver BHMT. (B) Electrophoretic analysis of fractions obtained from the affinity support shown above. RLH means rat liver homogenate (20 μg of proteins was applied). Fractions B1–B2 were eluted with betaine, fractions H1–H3 with DL-homocysteine, fractions I1–I2 with a solution of compound 1 (Table 2), fractions S1–S2 with 1% SDS, and fractions G1–G2 with 6 M GnCl. Fifteen μl from each fraction (700 μl) were applied on the gel. Molecular weights of standards (STD) are shown in kDa. Proteins marked as P21–P23 were submitted to N-terminal sequencing. (C) Western blot analysis of selected fractions from affinity purification of rat liver BHMT with polyclonal antibodies against human recombinant BHMT. For details, see Experimental Procedures. Chemistry & Biology 2003 10, 113-122DOI: (10.1016/S1074-5521(03)00008-5)