Martin Steinau, Sonya S. Patel, Elizabeth R. Unger 

Slides:



Advertisements
Similar presentations
2015 Alzheimer's disease facts and figures Alzheimer's & Dementia: The Journal of the Alzheimer's Association Volume 11, Issue 3, Pages (March.
Advertisements

Measurement of Relative Copy Number of CDKN2A/ARF and CDKN2B in Bladder Cancer by Real-Time Quantitative PCR and Multiplex Ligation-Dependent Probe Amplification.
How surgeons can find information online? Martin Hewitt International Journal of Surgery Volume 5, Issue 6, Pages (December 2007) DOI: /j.ijsu
Design and Multiseries Validation of a Web-Based Gene Expression Assay for Predicting Breast Cancer Recurrence and Patient Survival Ryan K. Van Laar The.
High-Quality Genotyping Data from Formalin-Fixed, Paraffin-Embedded Tissue on the Drug Metabolizing Enzymes and Transporters Plus Array  Hanneke I. Vos,
National Guidelines for Nursing Delegation
Evaluation and Validation of Total RNA Extraction Methods for MicroRNA Expression Analyses in Formalin-Fixed, Paraffin-Embedded Tissues  Martina Doleshal,
Anna Sapino, Paul Roepman, Sabine C. Linn, Mireille H. J
Evaluation and Validation of Total RNA Extraction Methods for MicroRNA Expression Analyses in Formalin-Fixed, Paraffin-Embedded Tissues  Martina Doleshal,
A Targeted High-Throughput Next-Generation Sequencing Panel for Clinical Screening of Mutations, Gene Amplifications, and Fusions in Solid Tumors  Rajyalakshmi.
Genotyping of DNA Samples Isolated from Formalin-Fixed Paraffin-Embedded Tissues Using Preamplification  Renee Baak-Pablo, Vincent Dezentje, Henk-Jan.
Sensitive Detection of KRAS Mutations in Archived Formalin-Fixed Paraffin-Embedded Tissue Using Mutant-Enriched PCR and Reverse-Hybridization  Christoph.
RT-PCR Analysis of RNA Extracted from Bouin-Fixed and Paraffin-Embedded Lymphoid Tissues  Annunziata Gloghini, Barbara Canal, Ulf Klein, Luigino Dal Maso,
Application of Selected Reaction Monitoring for Multiplex Quantification of Clinically Validated Biomarkers in Formalin-Fixed, Paraffin-Embedded Tumor.
Comprehensive Screening of Gene Copy Number Aberrations in Formalin-Fixed, Paraffin-Embedded Solid Tumors Using Molecular Inversion Probe–Based Single-
A Method to Evaluate the Quality of Clinical Gene-Panel Sequencing Data for Single- Nucleotide Variant Detection  Chung Lee, Joon S. Bae, Gyu H. Ryu, Nayoung.
Laboratory Guidelines for Detection, Interpretation, and Reporting of Maternal Cell Contamination in Prenatal Analyses  Narasimhan Nagan, Nicole E. Faulkner,
Whole Genome Amplification for Array Comparative Genomic Hybridization Using DNA Extracted from Formalin-Fixed, Paraffin-Embedded Histological Sections 
Bongyong Lee, Joseph Mazar, Muhammad N
Separate Quality-Control Measures Are Necessary for Estimation of RNA and Methylated DNA from Formalin-Fixed, Paraffin-Embedded Specimens by Quantitative.
Somatic Mutation Screening Using Archival Formalin-Fixed, Paraffin-Embedded Tissues by Fluidigm Multiplex PCR and Illumina Sequencing  Ming Wang, Leire.
Immunoguided Laser Assisted Microdissection Techniques for DNA Methylation Analysis of Archival Tissue Specimens  Franziska C. Eberle, Jeffrey C. Hanson,
Joanna Wang, Chetan Bettegowda  The Journal of Molecular Diagnostics 
Quantitative Expression Profiling in Formalin-Fixed Paraffin-Embedded Samples by Affymetrix Microarrays  Diana Abdueva, Michele Wing, Betty Schaub, Timothy.
Maxim B. Freidin, Neesa Bhudia, Eric Lim, Andrew G
Comparison of Allelic Discrimination by dHPLC, HRM, and TaqMan in the Detection of BRAF Mutation V600E  Pablo Carbonell, María C. Turpin, Daniel Torres-Moreno,
A Method for Measuring Gene Copy Number in Biological Samples without Using Control Samples of Known Copies  Wan Ji, Jian Li, Jinfeng Liu  The Journal.
Implementation of Formalin-Fixed, Paraffin-Embedded Cell Line Pellets as High-Quality Process Controls in Quality Assessment Programs for KRAS Mutation.
Sensitive Detection of KRAS Mutations in Archived Formalin-Fixed Paraffin-Embedded Tissue Using Mutant-Enriched PCR and Reverse-Hybridization  Christoph.
Enhancing techniques to evaluate tumor margins
ALK Status Testing in Non–Small Cell Lung Carcinoma
Performance Assessment of Eight High-Throughput PCR Assays for Viral Load Quantitation of Oncogenic HPV Types  Roberto Flores-Munguia, Erin Siegel, Walter.
Patrick R. Murray  The Journal of Molecular Diagnostics 
Technical Reproducibility of Single-Nucleotide and Size-Based DNA Biomarker Assessment Using DNA Extracted from Formalin-Fixed, Paraffin-Embedded Tissues 
Anna Sapino, Paul Roepman, Sabine C. Linn, Mireille H. J
QuantiGene Plex Represents a Promising Diagnostic Tool for Cell-of-Origin Subtyping of Diffuse Large B-Cell Lymphoma  John S. Hall, Suzanne Usher, Richard.
High-Quality Genotyping Data from Formalin-Fixed, Paraffin-Embedded Tissue on the Drug Metabolizing Enzymes and Transporters Plus Array  Hanneke I. Vos,
Hillary S. Sloane, James P. Landers, Kimberly A. Kelly 
Volume 26, Issue 2, Pages (February 2018)
Analytical Validation of BRAF Mutation Testing from Circulating Free DNA Using the Amplification Refractory Mutation Testing System  Kyaw L. Aung, Emma.
Evaluation of BRAF Mutation Testing Methodologies in Formalin-Fixed, Paraffin- Embedded Cutaneous Melanomas  Johanne Lade-Keller, Kirsten M. Rømer, Per.
Analytical Validation of Clinical Whole-Genome and Transcriptome Sequencing of Patient-Derived Tumors for Reporting Targetable Variants in Cancer  Kazimierz.
Volume 145, Issue 1, Pages (July 2013)
Target-Enriched Next-Generation Sequencing Reveals Differences between Primary and Secondary Ovarian Tumors in Formalin-Fixed, Paraffin-Embedded Tissue 
Christine Formisano-Tréziny, Marina de San Feliciano, Jean Gabert 
Molecular Inversion Probe Array for the Genetic Evaluation of Stillbirth Using Formalin- Fixed, Paraffin-Embedded Tissue  Leslie R. Rowe, Harshwardhan.
An Array-Based Analysis of MicroRNA Expression Comparing Matched Frozen and Formalin-Fixed Paraffin-Embedded Human Tissue Samples  Xiao Zhang, Jiamin.
Deamination Effects in Formalin-Fixed, Paraffin-Embedded Tissue Samples in the Era of Precision Medicine  Seokhwi Kim, Charny Park, Yongick Ji, Deok G.
Ashleigh C. McEvoy, Benjamin A. Wood, Nima M. Ardakani, Michelle R
Validation of a Gene Expression Test for Mesothelioma Prognosis in Formalin-Fixed Paraffin-Embedded Tissues  Assunta De Rienzo, Robert W. Cook, Jeff Wilkinson,
Mitochondrial DNA analysis of formalin-fixed paraffin-embedded tissue samples: Effect of formalin on DNA stability and its implications in genetic studies 
Multi-Institutional FASTQ File Exchange as a Means of Proficiency Testing for Next- Generation Sequencing Bioinformatics and Variant Interpretation  Kurtis.
The Pitfalls of Companion Diagnostics
Accurate Detection of Copy Number Changes in DNA Extracted from Formalin-Fixed, Paraffin-Embedded Melanoma Tissue Using Duplex Ratio Tests  David A. Moore,
Coexistence of Tyrosine Kinase Inhibitor-Sensitizing and Resistant EGFR Mutations in an Untreated Lung Adenocarcinoma Patient and Response to Erlotinib 
David L. Evers, Junkun He, Yeon Ho Kim, Jeffrey T. Mason, Timothy J
DNA and RNA References for qRT-PCR Assays in Exfoliated Cervical Cells
Gayatry Mohapatra, Rebecca A. Betensky, Ezra R
Table of contents The Journal for Nurse Practitioners
Evaluation of High-Resolution Melting Analysis as a Diagnostic Tool to Detect the BRAF V600E Mutation in Colorectal Tumors  Martin Pichler, Marija Balic,
Reviewer Acknowledgment
Validation and Reproducibility of a Microarray-Based Gene Expression Test for Tumor Identification in Formalin-Fixed, Paraffin-Embedded Specimens  Raji.
MicroRNA Expression in Melanocytic Nevi: The Usefulness of Formalin-Fixed, Paraffin- Embedded Material for miRNA Microarray Profiling  Martin Glud, Mikkel.
Table of contents The Journal for Nurse Practitioners
Detection of BRCA1 and BRCA2 Ashkenazi Jewish Founder Mutations in Formalin- Fixed Paraffin-Embedded Tissues Using Conventional PCR and Heteroduplex/Amplicon.
Efficient Identification of miRNAs for Classification of Tumor Origin
Establishment of a Molecular Diagnostic System for Spinal Muscular Atrophy  Jian Zeng, Yanhong Lin, Aizhen Yan, Longfeng Ke, Zhongyong Zhu, Fenghua Lan 
Clinical Experience with the Cervista HPV HR Assay
Monique A. Johnson, Marvin J. Yoshitomi, C. Sue Richards 
Tissue proteomics: a new investigative tool for renal biopsy analysis
Presentation transcript:

Efficient DNA Extraction for HPV Genotyping in Formalin-Fixed, Paraffin-Embedded Tissues  Martin Steinau, Sonya S. Patel, Elizabeth R. Unger  The Journal of Molecular Diagnostics  Volume 13, Issue 4, Pages 377-381 (July 2011) DOI: 10.1016/j.jmoldx.2011.03.007 Copyright © 2011 Terms and Conditions

Figure 1 Boxplot of distribution of measured HPV16 DNA copies in 58 xylene- and heat-treated extracts from FFPE tissues. Data are expressed as copy number per 10 μL in log10 scale. The Journal of Molecular Diagnostics 2011 13, 377-381DOI: (10.1016/j.jmoldx.2011.03.007) Copyright © 2011 Terms and Conditions