Standards Development for Metabolomics

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Presentation transcript:

Standards Development for Metabolomics Karen W. Phinney Analytical Chemistry Division, Chemical Science and Technology Laboratory, National Institute of Standards and Technology

Metabolomics The metabolome represents the identity and concentration of metabolites at a given point in time Dynamic in nature Reflects phenotype May be simpler than genome, proteome

Goals of Metabolomics Identification of new diagnostic tools Nicholson et al., 2008 Identification of new diagnostic tools Therapeutic targets (metabolic pathways) Drug toxicity Studies of gene function

What Are the Issues? Comparison of different data sets Sampling Instrument variations Software Identification of statistically significant metabolites Data deconvolution Spectral databases Validation of metabolites Kell et al., 2007

Reference Material Design – SRM 1950 New SRM 1950 Metabolites in Human Plasma is being developed to provide a well-characterized reference material for metabolomics technology development Plasma samples collected from approximately 100 individuals Equal number of healthy men and women, 40 – 50 years of age Racial distribution similar to that of U.S. population Total plasma volume ~ 20 L Both quantitative and qualitative (identity) information

Additional Needs Control samples for specific populations and matrices Tools for data alignment of complex data sets Validation of statistical models for pattern recognition Reporting standards – Metabolomics Standards Initiative