Genetics and Genomics Analysis Platform

Slides:



Advertisements
Similar presentations
Chuck Humphrey, Alberta Research Data Centre Canadian RDC Report Where are we now?
Advertisements

Due to the persecution of the obtaining of the excellence in the chain of value of the organizations by means of the optimization of business processes.
Cruise Training Introduction of Cruise. What you’ll learn Cruise features Pipeline workflows Zero-configuration build grid Parallelization Usability-driven.
Analysis of Tactile Map Reading Tablet, Visual and Signal Teams for CIS 423/510.
Using the Drupal Content Management Software (CMS) as a framework for OMICS/Imaging-based collaboration.
The iPlant Collaborative Community Cyberinfrastructure for Life Science Tools and Services Workshop Discovery Environment Overview.
Field Project Planning, Operations and Data Services Jim Moore, EOL Field Project Services (FPS) Mike Daniels, EOL Computing, Data and Software (CDS) Facility.
Modeling Framework Generally modeling framework is made up of the following components: A set of biophysical modules that simulate biological and physical.
Framework for Automated Builds Natalia Ratnikova CHEP’03.
PCORnet: PopMedNet Use Jessica Sturtevant Data Standards, Security and Network Infrastructure Operations Team July 27, 2015 PopMedNet User Group Conference.
EZID Easy Identifiers UC Curation Center California Digital Library.
BEN Architecture Isovera Consulting Feb Internet consulting for non-profits 2 BEN Architecture Diagram.
A framework to support collaborative Velo: Knowledge Management for Collaborative (Science | Biology) Projects A framework to support collaborative 1.
Connecting different ethnomusicological archives with ethnoArc Maurice Mengel Music Archive of the Ethnological Museum, National Museum in Berlin (EMEM)
David R. McWilliams, Ph.D. Section of Statistical Genetics, Department of Biostatistical Sciences, Center for Public Health Genomics Bioinformatician IV.
CRISP & SKA WP19 Status. Overview Staffing SKA Preconstruction phase Tiered Data Delivery Infrastructure Prototype deployment.
GEM Portal and SERVOGrid for Earthquake Science PTLIU Laboratory for Community Grids Geoffrey Fox, Marlon Pierce Computer Science, Informatics, Physics.
The iPlant Collaborative Community Cyberinfrastructure for Life Science Tools and Services Workshop Discovery Environment Overview.
A Brief Overview Andrew K. Bjerring President and CEO.
The iPlant Collaborative Community Cyberinfrastructure for Life Science Tools and Services Workshop Discovery Environment Overview.
+ SUH Incorporated Executive Briefing. + SUH Business Opportunity I.T. solutions are needed to improve SUH’s ability to operate Sales Support team would.
WEEK INTRODUCTION CSC426 SOFTWARE ENGINEERING.
ISERVOGrid Architecture Working Group Brisbane Australia June Geoffrey Fox Community Grids Lab Indiana University
5. October 2006e-IRG Workshop Espoo Resources e-Infrastructure Roadmap Update Chair: Peter Kunszt, Swiss National Supercomputing Centre CSCS.
| nectar.org.au NECTAR TRAINING Module 2 Virtual Laboratories and eResearch Tools.
System/SDWG Update Management Council Face-to-Face Flagstaff, AZ August 22-23, 2011 Sean Hardman.
Operation & Maintenance Construction & Logistics 4D/5D Construction Fabrication Documentation Analysis Detail Design Conceptual Design Programming Renovation.
GEMINI: Active Network Measurements Martin Swany, Indiana University.
1 This Changes Everything: Accelerating Scientific Discovery through High Performance Digital Infrastructure CANARIE’s Research Software.
AstroGrid & VO Structure NeSC, Edinburgh 21-March-2003 UK Astronomical Data Centres.
CyVerse Workshop Discovery Environment Overview. Welcome to the Discovery Environment A Simple Interface to Hundreds of Bioinformatics Apps, Powerful.
EGI-InSPIRE RI An Introduction to European Grid Infrastructure (EGI) March An Introduction to the European Grid Infrastructure.
Towards a unified MOD resource: An Overview
Shawn McClure, Rodger Ames and Doug Fox - CIRA
Nicolas Granier / June 7th
Use of HLT farm and Clouds in ALICE
Integrating Scientific Tools and Web Portals
CyVerse Discovery Environment
AWRA – Open Water Data Initiative – Lightning Talk
Oleksiy Karpenko, Neil J. Bahroos Galaxy Community Conference Chicago
Overview – SOE PatchTT November 2015.
WLCG experiments FedCloud through VAC/VCycle in the EGI
Tools and Services Workshop Overview of Atmosphere
The CEOS WGISS Atmospheric Composition Portal
IEEE Std 1074: Standard for Software Lifecycle
KOOPrime - Business Process Integrator for Life Sciences
What is a Science Gateway?
Recap: introduction to e-science
Using the Drupal Content Management Software (CMS) as a framework for OMICS/Imaging-based collaboration.
Exploitation of ISS Scientific data - sustainability
HII Technical Infrastructure
Solutions for federated services management EGI
iSERVOGrid Architecture Working Group Brisbane Australia June
Staying afloat in the sensor data deluge
Polly Baker Division Director: Data, Mining, and Visualization
Integration of EGA secure data access into Galaxy
Business transformation and GDPR compliance platform
Microbial Genomics Workshop Calgary, AB January 30, 2018
A distributed data-centric infrastructure
Material for today’s workshop is at:
Appropriately and Fast
Open Source Software Development Processes Version 2.5, 8 June 2002
Developing Web Specifications
Consortium: National networks in 16 European countries.
Consortium: National networks in 16 European countries.
Internet Engineering Course
VRE-IG European View: Sustainability Keith G Jeffery
Formulating channel strategy
EO[D|S]C Christoph Reimer EODC – Earth Observation Data Centre.
Internal components of a computer.
Presentation transcript:

Genetics and Genomics Analysis Platform Goal: To build a resource that will facilitate the distribution and analysis of high-throughput data for the Canadian life sciences research community.

How is GenAP going to help? Results Metadata Tracks QC Metrics ... Visualization Tools Development / Maintenance Raw Data Pipelines Setup / Distribution to multiple sites Analysis Software

Who's working on GenAP? 3 main components (and teams): Sherbrooke (Mammouth HPC) Infrastructure User Portal and services McGill (Guillimin HPC) CVMFS MUGQIC (McGill University and Genome Quebec Innovation Centre) Pipelines Components are interrelated: CVMFS to facilitate pipelines installation Use pipelines output with portal services