MFE Simulation Data Management

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Presentation transcript:

MFE Simulation Data Management SLAC DMW 2004 March 16, 2004 W. W. Lee and S. Klasky Princeton Plasma Physics Laboratory Princeton, NJ

• Huge range of spatial and temporal scales. Spatial & Temporal Scales Present Major Challenge to Theory & Simulations 10-6 10-4 10-2 100 102 Spatial Scales (m) electron gyroradius Debye length ion gyroradius tearing length skin depth system size atomic mfp electron-ion mfp 10-10 10-5 105 Temporal Scales (s) electron gyroperiod electron collision ion gyroperiod Ion collision inverse electron plasma frequency confinement Inverse ion plasma frequency current diffusion pulse length • Huge range of spatial and temporal scales. • Overlap in scales often means strong (simplified) ordering not possible Different codes/theory for different scales. 5+years: Integration of physics into Fusion Simulation Project

Major Fusion Codes

Data Rates of Major Fusion Codes (GB) now / 5yr Runtime now/5yr (hr) Processors Now/5yr Mbs GTC 4,000 / 100,000 300/150 2048 80/ 1600 Gyro 10 / 100 30/30 512/2048 .8/ 8 GS2 .8 / 8 Degas2 .1 1 10 .2 Transp .05 3 .04 Nimrod 5/ 50 20/20 128 .6/ 6 M3D 1.1/ 11 NSTX .25/shot 1/ 4 0.25 * 40 9, 36 Total (TB) 4.3 / 101

Plasma Turbulence Simulation • Gyrokinetic Particle-In-Cell Simulation -- Reduced Vlasov-Maxwell Equations • Simulations on MPP Platforms -- Cray T3E & IBM SP (NERSC), Cray-X1 (ORNL), SX6 (Earth Simulator, Japan) • Simulation of Burning Plasmas -- International Tokamak Experimental Reactor (ITER) • Integrated Fusion Simulation Project (MFE) • Visualization -- turbulence evolution & particle orbits

Gyrokinetic Approximation Gyromotion Polarization provides quasineutrality [W. W. Lee, PF ‘83; JCP ‘87]

18% 10 (Ethier) Earth Simulator

Ion Temperature Gradient Driven Turbulence Particle Trajectories Electrostatic Potential

Data Management challenges GTC is producing TBs of data Data rates: 80Mbs now, 1.6Gbs 5 years. Need QOS to stream data. This data needs to be post-processed Essential to parallelize the post-processing routines to handle our larger datasets. We need a cluster to post process this data. M (supercomputer processors) x N (cluster processors) problem. QOS becomes more important to sustain this post-processing. The post-processed data needs to be shared among collaborators Different sections of the post-processed data may go to different users . Post-processed data, along with other metadata should be archived into a relational database.

Post processing of GTC Data. Particle Data No compression possible. Sent to 1 cluster for visualization/analysis. Work being done with K. Ma, U.C. Davis: Visualize a million particles. Gain new insights into the theory. Field Data Geometric/Temporal compression of the data is possible. Data needs to be streamed to a local cluster at PPPL. Reduced subset needs to be sent to PPPL + collaborators. Use Logistic Network. [Beck, UT-K] Data transfer needs to be automatic, and integrated into a dataflow/webflow for use with parallel analysis routines. We desire to see post-processed data during the simulation.

After the analysis Post-processed data needs to be saved into a relational database How do we query this abstract data to compare it with experiments? 3D correlation functions Processing of TBs of data/run now, 100’s of TBs of data/run in 5 years. Data mining techniques will be necessary to understand this data.