Molecular and diagnostic clinical virology in real time

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Molecular and diagnostic clinical virology in real time H.G.M. Niesters  Clinical Microbiology and Infection  Volume 10, Issue 1, Pages 5-11 (January 2004) DOI: 10.1111/j.1469-0691.2004.00699.x Copyright © 2004 European Society of Clinical Infectious Diseases Terms and Conditions

Fig. 1 Data with the Ct value of the amplification plot of seal herpes virus type 1 (PhHV-1) added at a fixed concentration of approximately 5000–8000 copies/mL to each clinical sample. The results of a single experiment are shown, imported into a spreadsheet. The virus was coextracted using the MagnaPure LC isolation station, and quantified on an ABI7700 sequence detection system, using TaqMan universal reaction mixture (Applied Biosystems, Nieuwerkerk aan de Ijssel, The Netherlands). Primers and probe sequence were: forward primer 5'-GGGCGAATCACAGATTGAATC, reverse primer 5'-GCGGTTCCAAACGTACCAA, probe (labelled with TET) 5'-TTTTTATGTGTCCGCCACCATCTGGATC. An amplification product of 89 bp within the gB gene is generated. The average Ct value was 30.68 (average from 2359 samples analysed with this lot number), with an SD of 0.9. Samples in which the Ct value for the internal control was > 32.5 (average plus 2 SD) had to be repeated (one in this run, see arrow). Clinical Microbiology and Infection 2004 10, 5-11DOI: (10.1111/j.1469-0691.2004.00699.x) Copyright © 2004 European Society of Clinical Infectious Diseases Terms and Conditions

Fig. 2 Pre-emptive (PE) anti-B-cell immunotherapy for EBV. To monitor patients at risk for EBV PTLD, EBV DNA load was measured on a regular basis. At a level of 1000 copies/mL, the patients were recalled to the hospital, and PE therapy with rituximab (anti-CD20 therapy) was initiated. Monitoring was performed five times a week, until the EBV DNA level was twice below the limit of detection of the assay (50 copies/mL). If the signal did not decrease rapidly (or an increase was observed), a second infusion of rituximab or an infusion of donor lymphocytes (DLI) was given (see data represented by a thick line). The initiation of PE therapy is represented as day 0. Each line represents an individual patient. Clinical Microbiology and Infection 2004 10, 5-11DOI: (10.1111/j.1469-0691.2004.00699.x) Copyright © 2004 European Society of Clinical Infectious Diseases Terms and Conditions