A Larger Spectrum of Intragenic Short Tandem Repeats Improves Linkage Analysis and Localization of Intragenic Recombination Detection in the Dystrophin.

Slides:



Advertisements
Similar presentations
Measurement of Relative Copy Number of CDKN2A/ARF and CDKN2B in Bladder Cancer by Real-Time Quantitative PCR and Multiplex Ligation-Dependent Probe Amplification.
Advertisements

Nine Novel Germline Gene Variants in the RET Proto-Oncogene Identified in Twelve Unrelated Cases Syed A. Ahmed, Karen Snow-Bailey, W. Edward Highsmith,
Development of a Novel One-Tube Isothermal Reverse Transcription Thermophilic Helicase-Dependent Amplification Platform for Rapid RNA Detection James Goldmeyer,
One Hundred Twenty-One Dystrophin Point Mutations Detected from Stored DNA Samples by Combinatorial Denaturing High-Performance Liquid Chromatography Annalaura.
CyclinD1/CyclinD3 Ratio by Real-Time PCR Improves Specificity for the Diagnosis of Mantle Cell Lymphoma Carol D. Jones, Katherine H. Darnell, Roger A.
Design and Multiseries Validation of a Web-Based Gene Expression Assay for Predicting Breast Cancer Recurrence and Patient Survival Ryan K. Van Laar The.
An Allele-Specific RT-PCR Assay to Detect Type A Mutation of the Nucleophosmin-1 Gene in Acute Myeloid Leukemia Tiziana Ottone, Emanuele Ammatuna, Serena.
Detection of Exon 12 Mutations in the JAK2 Gene
Mutation Screening of EXT1 and EXT2 by Denaturing High-Performance Liquid Chromatography, Direct Sequencing Analysis, Fluorescence in Situ Hybridization,
Rapid Molecular Analysis of the STAT3 Gene in Job Syndrome of Hyper-IgE and Recurrent Infectious Diseases  Attila Kumánovics, Carl T. Wittwer, Robert.
Statistical Considerations for Immunohistochemistry Panel Development after Gene Expression Profiling of Human Cancers  Rebecca A. Betensky, Catherine.
Toward Universal Flavivirus Identification by Mass Cataloging
Expansion of an FMR1 Grey-Zone Allele to a Full Mutation in Two Generations  Isabel Fernandez-Carvajal, Blanca Lopez Posadas, Ruiqin Pan, Christopher Raske,
Wanlong Ma, Hagop Kantarjian, Xi Zhang, Chen-Hsiung Yeh, Zhong J
Mutation Screening in Juvenile Polyposis Syndrome
Yanggu Shi, Sharon F. Terry, Patrick F. Terry, Lionel G
Increased Sensitivity of the Roche COBAS AMPLICOR HCV Test, Version 2
Characterization of the Different BCR-ABL Transcripts with a Single Multiplex RT-PCR  Jacques Chasseriau, Jérôme Rivet, Frédéric Bilan, Jean-Claude Chomel,
Jeung-Yeal Ahn, Katie Seo, Olga Weinberg, Scott D. Boyd, Daniel A
Influenza A Subtyping The Journal of Molecular Diagnostics
Detecting 22q11.2 Deletions by Use of Multiplex Ligation-Dependent Probe Amplification on DNA from Neonatal Dried Blood Spot Samples  Karina M. Sørensen,
Thomas W. Prior, Scott J. Bridgeman 
Patrick R. Murray  The Journal of Molecular Diagnostics 
Detection of an Apparent Homozygous 3120G>A Cystic Fibrosis Mutation on a Routine Carrier Screen  Denise LaMarche Heaney, Patrick Flume, Lauren Hamilton,
Shaoyu Zhou, Keyaunoosh Kassauei, David J. Cutler, Giulia C
William L. Gerald, M.D., Ph.D, 1954–2008
Comprehensive and Rapid Genotyping of Mutations and Haplotypes in Congenital Bilateral Absence of the Vas Deferens and Other Cystic Fibrosis Transmembrane.
Assessing Heteroplasmic Load in Leber's Hereditary Optic Neuropathy Mutation 3460G→A/MT-ND1 with A Real-Time PCR Quantitative Approach  Anna Genasetti,
Volume 122, Issue 5, Pages (May 2002)
SeqSharp The Journal of Molecular Diagnostics
The Human Androgen Receptor X-Chromosome Inactivation Assay for Clonality Diagnostics of Natural Killer Cell Proliferations  Michaël Boudewijns, Jacques.
Detection of Exon 12 Mutations in the JAK2 Gene
Capillary Electrophoresis Artifact Due to Eosin
Analysis of Rare APC Variants at the mRNA Level
One Hundred Twenty-One Dystrophin Point Mutations Detected from Stored DNA Samples by Combinatorial Denaturing High-Performance Liquid Chromatography 
BRAF Mutation Testing in Solid Tumors
A Synonymous Mutation in the CFTR Gene Causes Aberrant Splicing in an Italian Patient Affected by a Mild Form of Cystic Fibrosis  Valeria Faa′, Alessandra.
Detection of FLT3 Internal Tandem Duplication and D835 Mutations by a Multiplex Polymerase Chain Reaction and Capillary Electrophoresis Assay  Kathleen.
The Molecular Pathology of Primary Immunodeficiencies
Lan Xiong, Malgorzata Labuda, Dong-Sheng Li, Thomas J
Evidence for a Nonallelic Heterogeneity of Epidermodysplasia Verruciformis with Two Susceptibility Loci Mapped to Chromosome Regions 2p21–p24 and 17q25 
Serum DNA Motifs Predict Disease and Clinical Status in Multiple Sclerosis  Julia Beck, Howard B. Urnovitz, Marina Saresella, Domenico Caputo, Mario Clerici,
A Highly Sensitive Genetic Protocol to Detect NF1 Mutations
EPCAM Germ Line Deletions as Causes of Lynch Syndrome in Spanish Patients  Carla Guarinos, Adela Castillejo, Víctor-Manuel Barberá, Lucía Pérez-Carbonell,
A Multi-Exonic BRCA1 Deletion Identified in Multiple Families through Single Nucleotide Polymorphism Haplotype Pair Analysis and Gene Amplification with.
Rapid One-Step Carrier Detection Assay of Mucolipidosis IV Mutations in the Ashkenazi Jewish Population  Feras M. Hantash, Susan C. Olson, Ben Anderson,
A Simple Method to Confirm and Size Deletion, Duplication, and Insertion Mutations Detected by Sequence Analysis  Lawrence N. Hjelm, Ephrem L.H. Chin,
Microfluidic Deletion/Insertion Analysis for Rapid Screening of KIT and PDGFRA Mutations in CD117-Positive Gastrointestinal Stromal Tumors  Alberto Zamò,
Familial Juvenile Hyperuricemic Nephropathy: Localization of the Gene on Chromosome 16p11.2—and Evidence for Genetic Heterogeneity  Blanka Stibůrková,
Allison M. Cushman-Vokoun, Solomon Connealy, Timothy C. Greiner 
Sarah E. Kerr, Cheryl B. Thomas, Stephen N. Thibodeau, Matthew J
Airong Li, Sonia Davila, Laszlo Furu, Qi Qian, Xin Tian, Patrick S
Multiple Sequence Variants in Hereditary Hemorrhagic Telangiectasia Cases  Jamie McDonald, Friederike Gedge, Allene Burdette, James Carlisle, Changkuoth.
Feras M. Hantash, Arlene Rebuyon, Mei Peng, Joy B
Cecily P. Vaughn, Elaine Lyon, Wade S. Samowitz 
Genotyping of Human Platelet Antigens 1 to 6 and 15 by High-Resolution Amplicon Melting and Conventional Hybridization Probes  Michael Liew, Lesa Nelson,
A New Insertion/Deletion of the Cystic Fibrosis Transmembrane Conductance Regulator Gene Accounts for 3.4% of Cystic Fibrosis Mutations in Sardinia: Implications.
Rapid Allelic Discrimination by TaqMan PCR for the Detection of the Gilbert's Syndrome Marker UGT1A1*28  Ursula Ehmer, Tim O. Lankisch, Thomas J. Erichsen,
Statistical Treatment of Fluorescence in Situ Hybridization Validation Data to Generate Normal Reference Ranges Using Excel Functions  Allison L. Ciolino,
Karen Snow-Bailey, Ph.D., 1961–2006
Telomeric IGH Losses Detectable by Fluorescence in Situ Hybridization in Chronic Lymphocytic Leukemia Reflect Somatic VH Recombination Events  Iwona Wlodarska,
Characterization of a Recurrent Novel Large Duplication in the Cystic Fibrosis Transmembrane Conductance Regulator Gene  Feras M. Hantash, Joy B. Redman,
A Haplotype Framework for Cystic Fibrosis Mutations in Iran
Multiplex Ligation-Dependent Probe Amplification Identification of Whole Exon and Single Nucleotide Deletions in the CFTR Gene of Hispanic Individuals.
Immunohistochemistry versus Microsatellite Instability Testing for Screening Colorectal Cancer Patients at Risk for Hereditary Nonpolyposis Colorectal.
Angiotensin I-Converting Enzyme
A Complex Rearrangement in the APC Gene Uncovered by Multiplex Ligation- Dependent Probe Amplification  Constanze Pagenstecher, Dorothea Gadzicki, Dietlinde.
Monique A. Johnson, Marvin J. Yoshitomi, C. Sue Richards 
Assignment of the Muscle-Eye-Brain Disease Gene to 1p32-p34 by Linkage Analysis and Homozygosity Mapping  Bru Cormand, Kristiina Avela, Helena Pihko,
Identification of Cystic Fibrosis Variants by Polymerase Chain Reaction/Oligonucleotide Ligation Assay  Karen M. Schwartz, Lisa L. Pike-Buchanan, Kasinathan.
Presentation transcript:

A Larger Spectrum of Intragenic Short Tandem Repeats Improves Linkage Analysis and Localization of Intragenic Recombination Detection in the Dystrophin Gene  Antonella Carsana, Giulia Frisso, Maria Roberta Tremolaterra, Elisabetta Ricci, Domenico De Rasmo, Francesco Salvatore  The Journal of Molecular Diagnostics  Volume 9, Issue 1, Pages 64-69 (February 2007) DOI: 10.2353/jmoldx.2007.060056 Copyright © 2007 American Society for Investigative Pathology and Association for Molecular Pathology Terms and Conditions

Figure 1 Electropherogram of the 15 intragenic STRs labeled with NED (channel 1), PET (channel 2), VIC (channel 3), or FAM (channel 4) fluorochromes. The Journal of Molecular Diagnostics 2007 9, 64-69DOI: (10.2353/jmoldx.2007.060056) Copyright © 2007 American Society for Investigative Pathology and Association for Molecular Pathology Terms and Conditions

Figure 2 A: Simplified map of the dystrophin gene showing the location of the 15 STRs (below) and of exons (above). B: Intragenic recombination events detected in this study and exon deletions present in some families15; the black bars indicate the intervals where recombination events occurred; the red bars indicate the deletion extent and position. The family identification numbers are indicated. The Journal of Molecular Diagnostics 2007 9, 64-69DOI: (10.2353/jmoldx.2007.060056) Copyright © 2007 American Society for Investigative Pathology and Association for Molecular Pathology Terms and Conditions

Figure 3 Pedigree and haplotype analysis of two D/BMD families showing recombination events located at the 5′ (A) or at the 3′ (B) region of the dystrophin gene. The thin black bar in FD# 73 (II:1 subject) indicates the region that cannot unambiguously be attributed to one haplotype. The arrows indicate the proband of each family. The Journal of Molecular Diagnostics 2007 9, 64-69DOI: (10.2353/jmoldx.2007.060056) Copyright © 2007 American Society for Investigative Pathology and Association for Molecular Pathology Terms and Conditions