TCF7L2 ChIP-seq in HCT116 cells.

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TCF7L2 ChIP-seq in HCT116 cells. TCF7L2 ChIP-seq in HCT116 cells. The orange color genes in the ‘Type II Diabetes Mellitus Signaling’ pathway represents TCF7L2 binding sites candidate target genes that were the closest gene transcription start site to TCF7L2 binding sites regardless of the direction from the binding site. Data were analyzed through the use of Ingenuity Pathways Analysis (Ingenuity Systems, http://www.ingenuity.com, Redwood) City, California, USA) specified for ‘Human’. The genes that contain at least one function or pathway annotation in the Ingenuity Knowledge Base were eligible for the analysis. ChIP, chromatin immunoprecipitation; TCF7L2, transcription factor 7-like 2; VDCC, voltage-dependent calcium channels; JNK, Jun N-terminal kinases; ROS, reactive oxygen species; PKC, protein kinase C; NF-κB, nuclear factor-κB; SUR, sulfonylurea receptor; TNFα, tumor necrosis factor α; INS, insulin; INSR, INS receptor; TRAF2, TNF receptor-associated factor 2; mTOR, mechanistic target of rapamycin; SMPD, sphingomyelin phosphodiesterases; DAG, diacylglycerol; PPAR, peroxisome proliferator-activated receptors; GK, glucokinase; PYK, pyruvate kinase; GLUT, glucose transporter; ADIPOR, adiponectin receptor. Matthew E Johnson et al. BMJ Open Diab Res Care 2014;2:e000052 ©2014 by American Diabetes Association