The Dawn of Virtual Cell Biology

Slides:



Advertisements
Similar presentations
Waging War on Cancer with the Sword of Immunity Cell Volume 158, Issue 2, (July 2014) DOI: /j.cell Copyright © 2014 Terms and Conditions.
Advertisements

SOD1 Integrates Signals from Oxygen and Glucose to Repress Respiration Amit R. Reddi, Valeria C. Culotta Cell Volume 152, Issue 1, Pages (January.
Individualized Medicine from Prewomb to Tomb Eric J. Topol Cell Volume 157, Issue 1, Pages (March 2014) DOI: /j.cell Copyright.
The RAG Recombinase Dictates Functional Heterogeneity and Cellular Fitness in Natural Killer Cells Jenny M. Karo, David G. Schatz, Joseph C. Sun Cell Volume.
The Cell-Non-Autonomous Nature of Electron Transport Chain-Mediated Longevity Jenni Durieux, Suzanne Wolff, Andrew Dillin Cell Volume 144, Issue 1, Pages.
Bleach Activates a Redox-Regulated Chaperone by Oxidative Protein Unfolding J. Winter, M. Ilbert, P.C.F. Graf, D. Özcelik, U. Jakob Cell Volume 135, Issue.
What We Talk About When We Talk About Fat Evan D. Rosen, Bruce M. Spiegelman Cell Volume 156, Issue 1, Pages (January 2014) DOI: /j.cell
Maintaining Cell Identity through Global Control of Genomic Organization Gioacchino Natoli Immunity Volume 33, Issue 1, Pages (July 2010) DOI: /j.immuni
Common Sense about Taste: From Mammals to Insects David A. Yarmolinsky, Charles S. Zuker, Nicholas J.P. Ryba Cell Volume 139, Issue 2, Pages (October.
Genome-wide Single-Cell Analysis of Recombination Activity and De Novo Mutation Rates in Human Sperm Jianbin Wang, H. Christina Fan, Barry Behr, Stephen.
UvrD Helicase Unwinds DNA One Base Pair at a Time by a Two-Part Power Stroke Jae Young Lee, Wei Yang Cell Volume 127, Issue 7, Pages (December.
Nucleation and Transport Organize Microtubules in Metaphase Spindles Jan Brugués, Valeria Nuzzo, Eric Mazur, Daniel J. Needleman Cell Volume 149, Issue.
Eph-Ephrin Bidirectional Signaling in Physiology and Disease Elena B. Pasquale Cell Volume 133, Issue 1, Pages (April 2008) DOI: /j.cell
Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome Corinne Ferrier Maurice, Henry Joseph Haiser, Peter James Turnbaugh.
Cancer Metabolism Cell Volume 148, Issue 3, (February 2012) DOI: /j.cell Copyright © 2012 Terms and Conditions Terms and Conditions.
RTEL1 Dismantles T Loops and Counteracts Telomeric G4-DNA to Maintain Telomere Integrity Jean-Baptiste Vannier, Visnja Pavicic-Kaltenbrunner, Mark I.R.
Predicting C4 Photosynthesis Evolution: Modular, Individually Adaptive Steps on a Mount Fuji Fitness Landscape David Heckmann, Stefanie Schulze, Alisandra.
The Monarch Butterfly Genome Yields Insights into Long-Distance Migration Shuai Zhan, Christine Merlin, Jeffrey L. Boore, Steven M. Reppert Cell Volume.
Dynein Anchors Its mRNA Cargo after Apical Transport in the Drosophila Blastoderm Embryo Renald Delanoue, Ilan Davis Cell Volume 122, Issue 1, Pages
Encoding of Both Analog- and Digital-like Behavioral Outputs by One C. elegans Interneuron Zhaoyu Li, Jie Liu, Maohua Zheng, X.Z. Shawn Xu Cell Volume.
Nuclear Receptors, RXR, and the Big Bang Ronald M. Evans, David J. Mangelsdorf Cell Volume 157, Issue 1, Pages (March 2014) DOI: /j.cell
Transmembrane Receptor DCC Associates with Protein Synthesis Machinery and Regulates Translation Joseph Tcherkezian, Perry A. Brittis, Franziska Thomas,
The Landscape of Microsatellite Instability in Colorectal and Endometrial Cancer Genomes Tae-Min Kim, Peter W. Laird, Peter J. Park Cell Volume 155, Issue.
Human Brown Adipose Tissue Sven Enerbäck Cell Metabolism Volume 11, Issue 4, Pages (April 2010) DOI: /j.cmet Copyright © 2010.
The Good Fat Cell Volume 147, Issue 7, (December 2011) DOI: /j.cell Copyright © 2011 Terms and Conditions Terms and Conditions.
A DNA-Dependent Protease Involved in DNA-Protein Crosslink Repair Julian Stingele, Michael S. Schwarz, Nicolas Bloemeke, Peter G. Wolf, Stefan Jentsch.
WHAMM Is an Arp2/3 Complex Activator That Binds Microtubules and Functions in ER to Golgi Transport Kenneth G. Campellone, Neil J. Webb, Elizabeth A. Znameroski,
SSB Functions as a Sliding Platform that Migrates on DNA via Reptation Ruobo Zhou, Alexander G. Kozlov, Rahul Roy, Jichuan Zhang, Sergey Korolev, Timothy.
Quantitative Single-Cell Approaches to Stem Cell Research Martin Etzrodt, Max Endele, Timm Schroeder Cell Stem Cell Volume 15, Issue 5, Pages (November.
Sex-Specific Aging in Flies, Worms, and Missing Great-Granddads
Metabolic Acceleration in Human Evolution
Shining a Light on Phase Separation in the Cell
Unweaving the Autism Spectrum
A Blend of Two Circadian Clocks, Seasoned to Perfection
Differential Geometry Meets the Cell
Mapping Human Epigenomes
Autophagy: Paying Charon's Toll
William J. Blake, James J. Collins  Cell 
Volume 154, Issue 1, Pages (July 2013)
Reconstructing Complex Tissues from Single-Cell Analyses
Skill Development in Graduate Education
Volume 170, Issue 2, Pages (July 2017)
In This Issue Cell Volume 158, Issue 5, (August 2014)
PU.1 Takes Control of the Dendritic Cell Lineage
Putting Two Heads Together to Build a Better Brain
Jon R. Lorsch, David G. Nichols  Cell 
Only Two Ways to Achieve Perfection
Recurrent Feedback Loops in Associative Learning
Decoding Chromatin Goes High Tech
Volume 152, Issue 1, (January 2013)
Volume 130, Issue 6, (September 2007)
Modeling Transcriptome Dynamics in a Complex World
Boosting Signal-to-Noise in Complex Biology: Prior Knowledge Is Power
Picking Pyknons out of the Human Genome
Watching the Fly Brain Learn
When Biology Doesn’t Add Up
Volume 91, Issue 6, Pages (September 2016)
Volume 143, Issue 6, (December 2010)
Proteins in Plant Brassinosteroid Signaling
Making the Most from Changes in Life
The Cell Biology of Genomes: Bringing the Double Helix to Life
Learning from the Uncontrollable
Volume 163, Issue 4, (November 2015)
Volume 163, Issue 2, (October 2015)
Navigating the Deubiquitinating Proteome with a CompPASS
Volume 134, Issue 6, (September 2008)
David Hubel and Torsten Wiesel
In This Issue Cell Volume 145, Issue 3, (April 2011)
Volume 148, Issue 1, (January 2012)
Targeting Protein Stability with a Small Molecule
Presentation transcript:

The Dawn of Virtual Cell Biology Peter L. Freddolino, Saeed Tavazoie  Cell  Volume 150, Issue 2, Pages 248-250 (July 2012) DOI: 10.1016/j.cell.2012.07.001 Copyright © 2012 Elsevier Inc. Terms and Conditions

Figure 1 The Role of Whole-Cell Simulations in Modern Biology As they mature, whole-cell models will integrate conceptual knowledge, low-throughput, and systems-level experimental information as inputs (the details of the modeling method used by Karr et al. (2012) is depicted as an example), and they will provide as output both quantitative predictions of unspecified parameters and qualitative information on previously unobserved behaviors. Initially, the primary focus of modelers must be to refine their models through a feedback loop of comparing predictions to both old and new focused experiments; as time goes on, however, model predictions will allow the proposal of new, testable hypotheses for previously unobserved organizing principles. In addition, the quantitative predictions of more refined whole-cell models should become increasingly useful in bioengineering applications. Cell 2012 150, 248-250DOI: (10.1016/j.cell.2012.07.001) Copyright © 2012 Elsevier Inc. Terms and Conditions