A novel method for the rapid and prospective identification of Beijing Mycobacterium tuberculosis strains by high-resolution melting analysis  M. Alonso,

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Presentation transcript:

A novel method for the rapid and prospective identification of Beijing Mycobacterium tuberculosis strains by high-resolution melting analysis  M. Alonso, Y. Navarro, F. Barletta, M. Martínez Lirola, E. Gotuzzo, E. Bouza, D. García de Viedma  Clinical Microbiology and Infection  Volume 17, Issue 3, Pages 349-357 (March 2011) DOI: 10.1111/j.1469-0691.2010.03234.x Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 1 High-resolution melting plots for the A191C mutation in the Rv2629 gene. (a) Normalized melting curves of the non-Beijing and Beijing profiles for the 32 cultured Mycobacterium tuberculosis control strains. (b) Derivative melting plot showing melting temperature peaks of non-Beijing (red) and Beijing (blue) genotypes. All reactions were performed in triplicate. Clinical Microbiology and Infection 2011 17, 349-357DOI: (10.1111/j.1469-0691.2010.03234.x) Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 2 Normalized melting curves for clinical samples with a high bacterial load. High-resolution melting plot for 18 smear-positive clinical samples and Beijing (blue) and non-Beijing (red) reference strains. All reactions were performed in triplicate. Clinical Microbiology and Infection 2011 17, 349-357DOI: (10.1111/j.1469-0691.2010.03234.x) Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 3 Normalized melting curves for clinical samples with a low/intermediate bacterial load. (a) Melting plot for 19 smear-positive clinical samples and Beijing and non-Beijing reference strains. (b) Aberrant normalized melting curves of representative samples. In some cases, no fluorescent signal was detected, as shown in the representative sample in the figure. In the inner square, the melting temperature peaks for the same strains are shown. Non-Beijing (red) and Beijing profiles (blue) are indicated. All reactions were performed in triplicate. Clinical Microbiology and Infection 2011 17, 349-357DOI: (10.1111/j.1469-0691.2010.03234.x) Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 4 Heteroduplex induction. (a) Normalized melting curves of a non-Beijing strain, a Beijing strain, and an intermediate thermodynamic product, the heteroduplex. (b) Derivative melting plot. The heteroduplex product showed an intermediate melting temperature peak. Non-Beijing (red), Beijing (blue) and heteroduplex (green) profiles are shown. All reactions were performed in triplicate. Clinical Microbiology and Infection 2011 17, 349-357DOI: (10.1111/j.1469-0691.2010.03234.x) Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions

FIG. 5 Heteroduplex induction in sputa that could not be analyzed by direct high-resolution melting. Non-Beijing (red), Beijing (blue) and heteroduplex (green) profiles are shown. All reactions were performed in triplicate. Clinical Microbiology and Infection 2011 17, 349-357DOI: (10.1111/j.1469-0691.2010.03234.x) Copyright © 2011 European Society of Clinical Infectious Diseases Terms and Conditions